RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 OCR1Q9BZK8 76 aa4.25□□□□□ -1.73
PHC3-214ENST00000494943 Q9UF83 564 aa4.25□□□□□ -1.73
PHC3-214ENST00000494943 LOC101927531A0A1B0GV80 90 aa4.25□□□□□ -1.73
PHC3-214ENST00000494943 SLURP1P55000 103 aa4.25□□□□□ -1.73
PHC3-214ENST00000494943 Q6ZTC4 211 aa4.25□□□□□ -1.73
PHC3-214ENST00000494943 DSCAML1Q8TD84 2053 aa4.25□□□□□ -1.73
PHC3-214ENST00000494943 FREM1Q5H8C1 2179 aa4.25□□□□□ -1.73
PHC3-214ENST00000494943 BBC3Q96PG8 261 aaPredicted RBP4.24□□□□□ -1.73
PHC3-214ENST00000494943 C22orf24Q9Y442 160 aa4.24□□□□□ -1.73
PHC3-214ENST00000494943 TNCP24821 2201 aa4.24□□□□□ -1.73
PHC3-214ENST00000494943 A0A1W2PNU3 283 aaPredicted RBP4.24□□□□□ -1.73
PHC3-214ENST00000494943 A8MTW9 85 aa4.24□□□□□ -1.73
PHC3-214ENST00000494943 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
PHC3-214ENST00000494943 C1orf137Q5JT78 98 aa4.24□□□□□ -1.73
PHC3-214ENST00000494943 VPS13AQ96RL7 3174 aa4.24□□□□□ -1.73
PHC3-214ENST00000494943 SDK2Q58EX2 2172 aa4.24□□□□□ -1.73
PHC3-214ENST00000494943 IGLV6-57P01721 117 aa4.24□□□□□ -1.73
PHC3-214ENST00000494943 EGFEM1PQ0D2K5 195 aa4.24□□□□□ -1.73
PHC3-214ENST00000494943 PRR4Q16378 134 aa4.24□□□□□ -1.73
PHC3-214ENST00000494943 KPRPQ5T749 579 aaPredicted RBP4.24□□□□□ -1.73
PHC3-214ENST00000494943 LOC100131303A0A0U1RQF7 123 aa4.23□□□□□ -1.73
PHC3-214ENST00000494943 LMO4P61968 165 aa4.23□□□□□ -1.73
PHC3-214ENST00000494943 C9orf116Q5BN46 136 aaPredicted RBP4.23□□□□□ -1.73
PHC3-214ENST00000494943 NACAE9PAV3 2078 aa4.23□□□□□ -1.73
PHC3-214ENST00000494943 C9orf129Q5T035 196 aaKnown RBP4.23□□□□□ -1.73
PHC3-214ENST00000494943 FREM2Q5SZK8 3169 aa4.23□□□□□ -1.73
PHC3-214ENST00000494943 WFDC10BQ8IUB3 73 aa4.23□□□□□ -1.73
PHC3-214ENST00000494943 LINC00588Q9Y4M8 146 aa4.23□□□□□ -1.73
PHC3-214ENST00000494943 Q8N9L7 120 aa4.22□□□□□ -1.73
PHC3-214ENST00000494943 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
PHC3-214ENST00000494943 ASXL3Q9C0F0 2248 aa4.22□□□□□ -1.73
PHC3-214ENST00000494943 IGLV4-60A0A075B6I1 120 aa4.22□□□□□ -1.73
PHC3-214ENST00000494943 IGHV4-30-2A0A087WSY4 118 aa4.22□□□□□ -1.73
PHC3-214ENST00000494943 ASB16-AS1Q495Z4 193 aa4.22□□□□□ -1.73
PHC3-214ENST00000494943 RETNLBQ9BQ08 111 aa4.22□□□□□ -1.73
PHC3-214ENST00000494943 IGLV10-54A0A075B6I4 117 aa4.22□□□□□ -1.73
PHC3-214ENST00000494943 GVQW2A0A096LPI5 108 aaPredicted RBP4.22□□□□□ -1.73
PHC3-214ENST00000494943 FAM229BQ4G0N7 80 aa4.22□□□□□ -1.73
PHC3-214ENST00000494943 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.22□□□□□ -1.73
PHC3-214ENST00000494943 PHF5AQ7RTV0 110 aaKnown RBP4.21□□□□□ -1.73
PHC3-214ENST00000494943 Q8NA96 180 aa4.21□□□□□ -1.73
PHC3-214ENST00000494943 WFDC13Q8IUB5 93 aa4.21□□□□□ -1.74
PHC3-214ENST00000494943 Q6ZRP5 223 aa4.21□□□□□ -1.74
PHC3-214ENST00000494943 PRR3P79522 188 aaKnown RBP4.2□□□□□ -1.74
PHC3-214ENST00000494943 NANOS2P60321 138 aaKnown RBP4.2□□□□□ -1.74
PHC3-214ENST00000494943 FAM104AQ969W3 186 aa4.2□□□□□ -1.74
PHC3-214ENST00000494943 WDR87Q6ZQQ6 2873 aa4.2□□□□□ -1.74
PHC3-214ENST00000494943 CUL9Q8IWT3 2517 aa4.2□□□□□ -1.74
PHC3-214ENST00000494943 CYSRT1A8MQ03 144 aa4.2□□□□□ -1.74
PHC3-214ENST00000494943 Q8NBF4 154 aa4.2□□□□□ -1.74
PHC3-214ENST00000494943 DNAJC13O75165 2243 aa4.2□□□□□ -1.74
PHC3-214ENST00000494943 TTC28Q96AY4 2481 aa4.2□□□□□ -1.74
PHC3-214ENST00000494943 LINC01006Q8NI28 216 aa4.2□□□□□ -1.74
PHC3-214ENST00000494943 CACNA1AO00555 2505 aa4.2□□□□□ -1.74
PHC3-214ENST00000494943 NCOR1O75376 2440 aa4.2□□□□□ -1.74
PHC3-214ENST00000494943 RPL37AP8A6NKH3 93 aa4.19□□□□□ -1.74
PHC3-214ENST00000494943 HTN3P15516 51 aa4.19□□□□□ -1.74
PHC3-214ENST00000494943 NAV3Q8IVL0 2385 aa4.19□□□□□ -1.74
PHC3-214ENST00000494943 A0A0J9YWU9 116 aa4.19□□□□□ -1.74
PHC3-214ENST00000494943 IGHV4-30-4P0DP06 118 aa4.19□□□□□ -1.74
PHC3-214ENST00000494943 LELP1Q5T871 98 aa4.19□□□□□ -1.74
PHC3-214ENST00000494943 MALRD1Q5VYJ5 2156 aa4.19□□□□□ -1.74
PHC3-214ENST00000494943 IGHV4-61A0A0C4DH41 118 aa4.19□□□□□ -1.74
PHC3-214ENST00000494943 AVPP01185 164 aa4.19□□□□□ -1.74
PHC3-214ENST00000494943 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.19□□□□□ -1.74
PHC3-214ENST00000494943 H0Y9J4 135 aa4.19□□□□□ -1.74
PHC3-214ENST00000494943 COA5Q86WW8 74 aa4.19□□□□□ -1.74
PHC3-214ENST00000494943 PLA2G2AP14555 144 aa4.18□□□□□ -1.74
PHC3-214ENST00000494943 ZFHX4Q86UP3 3567 aa4.18□□□□□ -1.74
PHC3-214ENST00000494943 SPAG11AQ6PDA7 123 aa4.18□□□□□ -1.74
PHC3-214ENST00000494943 DOCK10Q96BY6 2186 aa4.17□□□□□ -1.74
PHC3-214ENST00000494943 FRYQ5TBA9 3013 aa4.17□□□□□ -1.74
PHC3-214ENST00000494943 A0A096LPF7 62 aa4.17□□□□□ -1.74
PHC3-214ENST00000494943 SPART-AS1P0CW21 52 aa4.17□□□□□ -1.74
PHC3-214ENST00000494943 UNQ6190/PRO20217Q6UXQ8 127 aa4.17□□□□□ -1.74
PHC3-214ENST00000494943 MED13Q9UHV7 2174 aa4.17□□□□□ -1.74
PHC3-214ENST00000494943 KLK12Q9UKR0 248 aa4.17□□□□□ -1.74
PHC3-214ENST00000494943 BSNQ9UPA5 3926 aa4.17□□□□□ -1.74
PHC3-214ENST00000494943 Q5VV11 94 aa4.17□□□□□ -1.74
PHC3-214ENST00000494943 CNTRLQ7Z7A1 2325 aa4.17□□□□□ -1.74
PHC3-214ENST00000494943 ZGRF1Q86YA3 2104 aa4.17□□□□□ -1.74
PHC3-214ENST00000494943 XAGE1AQ9HD64 81 aa4.16□□□□□ -1.74
PHC3-214ENST00000494943 CELSR3Q9NYQ7 3312 aa4.16□□□□□ -1.74
PHC3-214ENST00000494943 DEFB136Q30KP8 78 aa4.16□□□□□ -1.74
PHC3-214ENST00000494943 H3BS24 57 aa4.16□□□□□ -1.74
PHC3-214ENST00000494943 KCNQ1DNQ9H478 68 aa4.16□□□□□ -1.74
PHC3-214ENST00000494943 Q6YL49 198 aa4.15□□□□□ -1.74
PHC3-214ENST00000494943 K7ERS5 55 aa4.15□□□□□ -1.74
PHC3-214ENST00000494943 ZNF702PQ9H963 129 aa4.15□□□□□ -1.74
PHC3-214ENST00000494943 KIAA0087Q14695 138 aa4.15□□□□□ -1.75
PHC3-214ENST00000494943 MUC6Q6W4X9 2439 aa4.15□□□□□ -1.75
PHC3-214ENST00000494943 CFAP47Q6ZTR5 3102 aa4.15□□□□□ -1.75
PHC3-214ENST00000494943 IGKV2D-24A0A075B6R9 120 aa4.14□□□□□ -1.75
PHC3-214ENST00000494943 ADORA2A-AS1P86434 159 aa4.14□□□□□ -1.75
PHC3-214ENST00000494943 LINC01554Q52M75 96 aa4.14□□□□□ -1.75
PHC3-214ENST00000494943 LINC00528Q8N1L1 170 aa4.14□□□□□ -1.75
PHC3-214ENST00000494943 LINC01558Q9Y6Z2 57 aa4.14□□□□□ -1.75
PHC3-214ENST00000494943 A0A087X002 238 aa4.14□□□□□ -1.75
PHC3-214ENST00000494943 GRNP28799 593 aaKnown RBP4.14□□□□□ -1.75
PHC3-214ENST00000494943 Q8N9P0 234 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms