RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 LINC00643Q86TS7 51 aa10.38□□□□□ -0.75
UBXN11-215ENST00000494942 NOTCH3Q9UM47 2321 aa10.38□□□□□ -0.75
UBXN11-215ENST00000494942 SS18Q15532 418 aa10.36□□□□□ -0.75
UBXN11-215ENST00000494942 C6orf226Q5I0X4 101 aa10.36□□□□□ -0.75
UBXN11-215ENST00000494942 SDIM1Q6ZPB5 146 aa10.36□□□□□ -0.75
UBXN11-215ENST00000494942 B5MCH6 92 aa10.36□□□□□ -0.75
UBXN11-215ENST00000494942 GYPEP15421 78 aa10.36□□□□□ -0.75
UBXN11-215ENST00000494942 PFN2P35080 140 aa10.36□□□□□ -0.75
UBXN11-215ENST00000494942 Q9HAA7 133 aa10.36□□□□□ -0.75
UBXN11-215ENST00000494942 C2CD3Q4AC94 2353 aa10.35□□□□□ -0.75
UBXN11-215ENST00000494942 CUBNO60494 3623 aa10.35□□□□□ -0.75
UBXN11-215ENST00000494942 SMIM9A6NGZ8 99 aa10.35□□□□□ -0.75
UBXN11-215ENST00000494942 LINC01561Q8N1V8 128 aa10.35□□□□□ -0.75
UBXN11-215ENST00000494942 PAX4O43316 350 aa10.34□□□□□ -0.75
UBXN11-215ENST00000494942 TEP1Q99973 2627 aaKnown RBP10.34□□□□□ -0.75
UBXN11-215ENST00000494942 CCDC179H3BU77 68 aa10.34□□□□□ -0.75
UBXN11-215ENST00000494942 LY6G6DO95868 133 aa10.34□□□□□ -0.75
UBXN11-215ENST00000494942 Q8IZM0 81 aa10.34□□□□□ -0.75
UBXN11-215ENST00000494942 PRO0255Q9UI72 69 aa10.34□□□□□ -0.75
UBXN11-215ENST00000494942 JMJD1CQ15652 2540 aa10.33□□□□□ -0.76
UBXN11-215ENST00000494942 SMCR5Q8TEV8 140 aa10.33□□□□□ -0.76
UBXN11-215ENST00000494942 A0A087WYN8 130 aa10.33□□□□□ -0.76
UBXN11-215ENST00000494942 HIVEP2P31629 2446 aa10.32□□□□□ -0.76
UBXN11-215ENST00000494942 XCL1P47992 114 aa10.32□□□□□ -0.76
UBXN11-215ENST00000494942 SVIPQ8NHG7 77 aa10.32□□□□□ -0.76
UBXN11-215ENST00000494942 MTORP42345 2549 aa10.32□□□□□ -0.76
UBXN11-215ENST00000494942 NSD1Q96L73 2696 aaPredicted RBP10.32□□□□□ -0.76
UBXN11-215ENST00000494942 OR13C6PQ8NH95 151 aa10.31□□□□□ -0.76
UBXN11-215ENST00000494942 X6R8D5 127 aa10.31□□□□□ -0.76
UBXN11-215ENST00000494942 NIPBLQ6KC79 2804 aaeCLIP10.31□□□□□ -0.76
UBXN11-215ENST00000494942 GAGE2AQ6NT46 116 aa10.3□□□□□ -0.76
UBXN11-215ENST00000494942 LINC00482Q8N8I6 264 aa10.3□□□□□ -0.76
UBXN11-215ENST00000494942 SS18L2Q9UHA2 77 aa10.3□□□□□ -0.76
UBXN11-215ENST00000494942 CXCL5P42830 114 aa10.29□□□□□ -0.76
UBXN11-215ENST00000494942 C11orf68Q9H3H3 251 aaKnown RBP10.29□□□□□ -0.76
UBXN11-215ENST00000494942 LYRM9A8MSI8 78 aa10.29□□□□□ -0.76
UBXN11-215ENST00000494942 OBSCN-AS1Q96MR7 158 aa10.29□□□□□ -0.76
UBXN11-215ENST00000494942 LECT2O14960 151 aa10.28□□□□□ -0.76
UBXN11-215ENST00000494942 FAM236AA0A1B0GUQ0 79 aa10.28□□□□□ -0.76
UBXN11-215ENST00000494942 FAM236BA0A1B0GV22 79 aa10.28□□□□□ -0.76
UBXN11-215ENST00000494942 SETD2Q9BYW2 2564 aaPredicted RBP10.27□□□□□ -0.77
UBXN11-215ENST00000494942 ATP5G1P05496 136 aa10.27□□□□□ -0.77
UBXN11-215ENST00000494942 COX17Q14061 63 aa10.27□□□□□ -0.77
UBXN11-215ENST00000494942 CD164L2Q6UWJ8 174 aa10.27□□□□□ -0.77
UBXN11-215ENST00000494942 FN1P02751 2386 aaKnown RBP10.27□□□□□ -0.77
UBXN11-215ENST00000494942 INAFM1C9JVW0 142 aa10.26□□□□□ -0.77
UBXN11-215ENST00000494942 KRTAP10-3P60369 221 aa10.26□□□□□ -0.77
UBXN11-215ENST00000494942 CLPSL2Q6UWE3 100 aa10.25□□□□□ -0.77
UBXN11-215ENST00000494942 A0A1B0GX51 115 aa10.25□□□□□ -0.77
UBXN11-215ENST00000494942 NDUFC2O95298 119 aa10.25□□□□□ -0.77
UBXN11-215ENST00000494942 A0A096LPF7 62 aa10.24□□□□□ -0.77
UBXN11-215ENST00000494942 CFAP161Q6P656 301 aa10.24□□□□□ -0.77
UBXN11-215ENST00000494942 ORMDL1Q9P0S3 153 aa10.24□□□□□ -0.77
UBXN11-215ENST00000494942 KLK5Q9Y337 293 aaPredicted RBP10.24□□□□□ -0.77
UBXN11-215ENST00000494942 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
UBXN11-215ENST00000494942 C14orf132Q9NPU4 83 aa10.24□□□□□ -0.77
UBXN11-215ENST00000494942 KIAA0087Q14695 138 aa10.23□□□□□ -0.77
UBXN11-215ENST00000494942 IGHV4-28A0A0C4DH34 117 aa10.23□□□□□ -0.77
UBXN11-215ENST00000494942 C9orf129Q5T035 196 aaKnown RBP10.23□□□□□ -0.77
UBXN11-215ENST00000494942 C9orf66Q5T8R8 295 aa10.23□□□□□ -0.77
UBXN11-215ENST00000494942 CHCHD10Q8WYQ3 142 aaPredicted RBP10.22□□□□□ -0.77
UBXN11-215ENST00000494942 LINC00167Q96N53 147 aa10.22□□□□□ -0.77
UBXN11-215ENST00000494942 TMEM126AQ9H061 195 aa10.22□□□□□ -0.77
UBXN11-215ENST00000494942 REG3AQ06141 175 aa10.21□□□□□ -0.77
UBXN11-215ENST00000494942 ANGP03950 147 aaKnown RBP10.21□□□□□ -0.78
UBXN11-215ENST00000494942 APOC4P55056 127 aa10.2□□□□□ -0.78
UBXN11-215ENST00000494942 SLPIP03973 132 aa10.19□□□□□ -0.78
UBXN11-215ENST00000494942 NANOS2P60321 138 aaKnown RBP10.19□□□□□ -0.78
UBXN11-215ENST00000494942 NCR3O14931 201 aa10.19□□□□□ -0.78
UBXN11-215ENST00000494942 DAD1P61803 113 aa10.19□□□□□ -0.78
UBXN11-215ENST00000494942 DEFB135Q30KP9 77 aa10.18□□□□□ -0.78
UBXN11-215ENST00000494942 Q8N814 137 aa10.18□□□□□ -0.78
UBXN11-215ENST00000494942 JMJD7-PLA2G4BH0Y9G9 81 aa10.18□□□□□ -0.78
UBXN11-215ENST00000494942 Q6JHZ5 121 aa10.18□□□□□ -0.78
UBXN11-215ENST00000494942 MUC7Q8TAX7 377 aa10.18□□□□□ -0.78
UBXN11-215ENST00000494942 LINC00846Q9NV44 126 aa10.17□□□□□ -0.78
UBXN11-215ENST00000494942 IGLV10-54A0A075B6I4 117 aa10.17□□□□□ -0.78
UBXN11-215ENST00000494942 TMEM256-PLSCR3K7ERE1 68 aa10.17□□□□□ -0.78
UBXN11-215ENST00000494942 UQCRQO14949 82 aa10.17□□□□□ -0.78
UBXN11-215ENST00000494942 PRR3P79522 188 aaKnown RBP10.17□□□□□ -0.78
UBXN11-215ENST00000494942 C3orf22Q8N5N4 141 aa10.17□□□□□ -0.78
UBXN11-215ENST00000494942 HIST1H4AP62805 103 aaKnown RBP10.16□□□□□ -0.78
UBXN11-215ENST00000494942 DEFB4AO15263 64 aa10.16□□□□□ -0.78
UBXN11-215ENST00000494942 CCKP06307 115 aa10.16□□□□□ -0.78
UBXN11-215ENST00000494942 MIFP14174 115 aa10.15□□□□□ -0.78
UBXN11-215ENST00000494942 ATOX1O00244 68 aa10.15□□□□□ -0.79
UBXN11-215ENST00000494942 Q8N3U1 123 aa10.14□□□□□ -0.79
UBXN11-215ENST00000494942 C9orf116Q5BN46 136 aaPredicted RBP10.13□□□□□ -0.79
UBXN11-215ENST00000494942 LELP1Q5T871 98 aa10.13□□□□□ -0.79
UBXN11-215ENST00000494942 LINC00526Q96FQ7 95 aa10.13□□□□□ -0.79
UBXN11-215ENST00000494942 C9orf153Q5TBE3 101 aa10.13□□□□□ -0.79
UBXN11-215ENST00000494942 Q8NAQ8 132 aa10.13□□□□□ -0.79
UBXN11-215ENST00000494942 S100A7L2Q5SY68 101 aa10.12□□□□□ -0.79
UBXN11-215ENST00000494942 SPATA3Q8NHX4 192 aa10.12□□□□□ -0.79
UBXN11-215ENST00000494942 SPART-AS1P0CW21 52 aa10.12□□□□□ -0.79
UBXN11-215ENST00000494942 COX7CP15954 63 aa10.11□□□□□ -0.79
UBXN11-215ENST00000494942 SPAG11BQ08648 103 aa10.11□□□□□ -0.79
UBXN11-215ENST00000494942 C6orf99Q4VX62 202 aa10.11□□□□□ -0.79
UBXN11-215ENST00000494942 CELA1Q9UNI1 258 aa10.11□□□□□ -0.79
UBXN11-215ENST00000494942 A0A0J9YWU9 116 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms