RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 TXNDC17Q9BRA2 123 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 MYOFQ9NZM1 2061 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 NUP188Q5SRE5 1749 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 GBF1Q92538 1859 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 NESP48681 1621 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 ARHGAP32A7KAX9 2087 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 TRGV2A0A075B6R0 118 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 TRAV21A0A0B4J279 112 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 CAV3P56539 151 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 SPINK7P58062 85 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 C10orf113Q5VZT2 155 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 NCBP2-AS2Q69YL0 99 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 NMES1Q9C002 83 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 LINC00472Q9H8W2 130 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 SAMD9Q5K651 1589 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 RICTORQ6R327 1708 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 PKD1L3Q7Z443 1732 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 PARP4Q9UKK3 1724 aaKnown RBP1.11□□□□□ -2.23
PTPN12-212ENST00000494248 CR1P17927 2039 aa1.11□□□□□ -2.23
PTPN12-212ENST00000494248 AGLP35573 1532 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 ZMYM4Q5VZL5 1548 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 OTOGLQ3ZCN5 2332 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 MED13Q9UHV7 2174 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 TIAM2Q8IVF5 1701 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 IQGAP2Q13576 1575 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 CUL9Q8IWT3 2517 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 TRBV6-1A0A0K0K1D8 114 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 J3QRE1 110 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 ACYP2P14621 99 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 IGFL1Q6UW32 110 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 Q6ZQY7 126 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 Q6ZRN7 208 aaPredicted RBP1.1□□□□□ -2.23
PTPN12-212ENST00000494248 ZCCHC13Q8WW36 166 aaKnown RBP1.1□□□□□ -2.23
PTPN12-212ENST00000494248 HEATR5BQ9P2D3 2071 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 TNRC6BQ9UPQ9 1833 aaKnown RBP1.1□□□□□ -2.23
PTPN12-212ENST00000494248 PRR14LQ5THK1 2151 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 C3P01024 1663 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 C5P01031 1676 aa1.1□□□□□ -2.23
PTPN12-212ENST00000494248 ZGRF1Q86YA3 2104 aa1.09□□□□□ -2.23
PTPN12-212ENST00000494248 MED12LQ86YW9 2145 aa1.09□□□□□ -2.23
PTPN12-212ENST00000494248 HCRTO43612 131 aa1.09□□□□□ -2.23
PTPN12-212ENST00000494248 PRH1P02810 166 aa1.09□□□□□ -2.23
PTPN12-212ENST00000494248 C10orf99Q6UWK7 81 aa1.09□□□□□ -2.23
PTPN12-212ENST00000494248 WFDC9Q8NEX5 89 aa1.09□□□□□ -2.23
PTPN12-212ENST00000494248 CCL19Q99731 98 aa1.09□□□□□ -2.23
PTPN12-212ENST00000494248 UBL5Q9BZL1 73 aa1.09□□□□□ -2.23
PTPN12-212ENST00000494248 CMC2Q9NRP2 79 aa1.09□□□□□ -2.23
PTPN12-212ENST00000494248 TSC2P49815 1807 aa1.09□□□□□ -2.23
PTPN12-212ENST00000494248 MICAL3Q7RTP6 2002 aa1.09□□□□□ -2.24
PTPN12-212ENST00000494248 ZNF831Q5JPB2 1677 aa1.09□□□□□ -2.24
PTPN12-212ENST00000494248 NUMA1Q14980 2115 aa1.09□□□□□ -2.24
PTPN12-212ENST00000494248 SDK2Q58EX2 2172 aa1.08□□□□□ -2.24
PTPN12-212ENST00000494248 MPDZO75970 2070 aa1.08□□□□□ -2.24
PTPN12-212ENST00000494248 DEFB112Q30KQ8 113 aa1.08□□□□□ -2.24
PTPN12-212ENST00000494248 ENHOQ6UWT2 76 aa1.08□□□□□ -2.24
PTPN12-212ENST00000494248 OBSCN-AS1Q96MR7 158 aa1.08□□□□□ -2.24
PTPN12-212ENST00000494248 GAFA1Q96PS6 74 aa1.08□□□□□ -2.24
PTPN12-212ENST00000494248 POLR1AO95602 1720 aaPredicted RBP1.08□□□□□ -2.24
PTPN12-212ENST00000494248 TJP1Q07157 1748 aa1.08□□□□□ -2.24
PTPN12-212ENST00000494248 ZNF236Q9UL36 1845 aa1.08□□□□□ -2.24
PTPN12-212ENST00000494248 DOCK11Q5JSL3 2073 aa1.08□□□□□ -2.24
PTPN12-212ENST00000494248 CEP192Q8TEP8 1941 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 LRRC37A2A6NM11 1700 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 LY75O60449 1722 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 FMN2Q9NZ56 1722 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 COL14A1Q05707 1796 aaKnown RBP1.07□□□□□ -2.24
PTPN12-212ENST00000494248 BCORQ6W2J9 1755 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 SLIT1O75093 1534 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 LINC00959A0A1B0GUT2 108 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 NCR3O14931 201 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 FCER1GP30273 86 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 COL5A1P20908 1838 aaPredicted RBP1.07□□□□□ -2.24
PTPN12-212ENST00000494248 CACNA1DQ01668 2161 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 MED12Q93074 2177 aa1.07□□□□□ -2.24
PTPN12-212ENST00000494248 ZFHX3Q15911 3703 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 TRPM2O94759 1503 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 NFAT5O94916 1531 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 UBR3Q6ZT12 1888 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 ABCC8Q09428 1581 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 NWD1Q149M9 1564 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 A0A096LNT2 108 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 A0A1B0GU69 56 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 SERF2P84101 59 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 SMIM11BQ8TCY0 68 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 PLAC4Q8WY50 150 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 ABRACLQ9P1F3 81 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 NRXN3Q9Y4C0 1643 aa1.06□□□□□ -2.24
PTPN12-212ENST00000494248 SHROOM3Q8TF72 1996 aa1.05□□□□□ -2.24
PTPN12-212ENST00000494248 NINQ8N4C6 2090 aa1.05□□□□□ -2.24
PTPN12-212ENST00000494248 FAM208AQ9UK61 1670 aaKnown RBP1.05□□□□□ -2.24
PTPN12-212ENST00000494248 GVQW2A0A096LPI5 108 aaPredicted RBP1.05□□□□□ -2.24
PTPN12-212ENST00000494248 NDUFA4O00483 81 aa1.05□□□□□ -2.24
PTPN12-212ENST00000494248 PIN1P1O15428 100 aa1.05□□□□□ -2.24
PTPN12-212ENST00000494248 COX7BP24311 80 aa1.05□□□□□ -2.24
PTPN12-212ENST00000494248 PLNP26678 52 aa1.05□□□□□ -2.24
PTPN12-212ENST00000494248 DEFB114Q30KQ6 69 aa1.05□□□□□ -2.24
PTPN12-212ENST00000494248 UNQ6190/PRO20217Q6UXQ8 127 aa1.05□□□□□ -2.24
PTPN12-212ENST00000494248 Q6ZRX8 168 aa1.05□□□□□ -2.24
PTPN12-212ENST00000494248 HEATR1Q9H583 2144 aaKnown RBP1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms