RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 LINC00614P0C842 121 aa14.1□□□□□ -0.15
SNIP1-203ENST00000493916 PACRGQ96M98 296 aaPredicted RBP14.1□□□□□ -0.15
SNIP1-203ENST00000493916 IGLV5-45A0A087WSX0 123 aa14.09□□□□□ -0.15
SNIP1-203ENST00000493916 A0A096LNJ9 63 aa14.09□□□□□ -0.15
SNIP1-203ENST00000493916 PMVKQ15126 192 aa14.09□□□□□ -0.15
SNIP1-203ENST00000493916 LINC00469Q8N7U9 141 aa14.08□□□□□ -0.16
SNIP1-203ENST00000493916 TOMM7Q9P0U1 55 aa14.08□□□□□ -0.16
SNIP1-203ENST00000493916 CKS1BP61024 79 aa14.07□□□□□ -0.16
SNIP1-203ENST00000493916 C6orf226Q5I0X4 101 aa14.07□□□□□ -0.16
SNIP1-203ENST00000493916 NDUFC2-KCTD14E9PQ53 114 aa14.06□□□□□ -0.16
SNIP1-203ENST00000493916 HBDP02042 147 aa14.06□□□□□ -0.16
SNIP1-203ENST00000493916 RAB5BP61020 215 aa14.06□□□□□ -0.16
SNIP1-203ENST00000493916 SMIM1B2RUZ4 78 aa14.05□□□□□ -0.16
SNIP1-203ENST00000493916 GAGE2EQ4V326 116 aa14.04□□□□□ -0.16
SNIP1-203ENST00000493916 GAGE2DQ9UEU5 116 aa14.04□□□□□ -0.16
SNIP1-203ENST00000493916 CXCL5P42830 114 aa14.03□□□□□ -0.16
SNIP1-203ENST00000493916 PDZD11Q5EBL8 140 aa14.03□□□□□ -0.16
SNIP1-203ENST00000493916 CBLN2Q8IUK8 224 aa14.03□□□□□ -0.16
SNIP1-203ENST00000493916 F8VRH5 84 aa14.02□□□□□ -0.17
SNIP1-203ENST00000493916 FAM168BA1KXE4 195 aa14.01□□□□□ -0.17
SNIP1-203ENST00000493916 IGLC3P0DOY3 106 aa14.01□□□□□ -0.17
SNIP1-203ENST00000493916 PMCHL1Q16048 86 aa14.01□□□□□ -0.17
SNIP1-203ENST00000493916 PHF5AQ7RTV0 110 aaKnown RBP14.01□□□□□ -0.17
SNIP1-203ENST00000493916 ATP5LO75964 103 aa13.99□□□□□ -0.17
SNIP1-203ENST00000493916 FAM19A5Q7Z5A7 132 aaPredicted RBP13.99□□□□□ -0.17
SNIP1-203ENST00000493916 SLC7A5P1Q8MH63 180 aa13.99□□□□□ -0.17
SNIP1-203ENST00000493916 COX7B2Q8TF08 81 aa13.99□□□□□ -0.17
SNIP1-203ENST00000493916 H3BRM9 83 aa13.98□□□□□ -0.17
SNIP1-203ENST00000493916 C9orf129Q5T035 196 aaKnown RBP13.98□□□□□ -0.17
SNIP1-203ENST00000493916 SPINK6Q6UWN8 80 aa13.98□□□□□ -0.17
SNIP1-203ENST00000493916 CHCHD1Q96BP2 118 aaKnown RBP13.98□□□□□ -0.17
SNIP1-203ENST00000493916 SPINK8P0C7L1 97 aa13.97□□□□□ -0.17
SNIP1-203ENST00000493916 NDUFA6P56556 154 aa13.97□□□□□ -0.17
SNIP1-203ENST00000493916 KRTAP7-1Q8IUC3 87 aa13.97□□□□□ -0.17
SNIP1-203ENST00000493916 PSORS1C2Q9UIG4 136 aa13.97□□□□□ -0.17
SNIP1-203ENST00000493916 SRSF9Q13242 221 aaKnown RBP eCLIP13.96□□□□□ -0.17
SNIP1-203ENST00000493916 MT1HL1P0DM35 61 aa13.95□□□□□ -0.18
SNIP1-203ENST00000493916 M0QXV9 152 aa13.93□□□□□ -0.18
SNIP1-203ENST00000493916 ZNF22P17026 224 aaPredicted RBP13.93□□□□□ -0.18
SNIP1-203ENST00000493916 IGLV5-39A0A0G2JS06 123 aa13.92□□□□□ -0.18
SNIP1-203ENST00000493916 C1orf137Q5JT78 98 aa13.91□□□□□ -0.18
SNIP1-203ENST00000493916 BAGE3Q86Y29 109 aa13.91□□□□□ -0.18
SNIP1-203ENST00000493916 ODF1Q14990 250 aa13.9□□□□□ -0.18
SNIP1-203ENST00000493916 TRGC2P03986 189 aa13.89□□□□□ -0.19
SNIP1-203ENST00000493916 REG3GQ6UW15 175 aa13.89□□□□□ -0.19
SNIP1-203ENST00000493916 KRTAP11-1Q8IUC1 163 aa13.89□□□□□ -0.19
SNIP1-203ENST00000493916 LINC01600Q96MT4 127 aa13.89□□□□□ -0.19
SNIP1-203ENST00000493916 XAGE1AQ9HD64 81 aa13.89□□□□□ -0.19
SNIP1-203ENST00000493916 C11orf86A6NJI1 115 aa13.88□□□□□ -0.19
SNIP1-203ENST00000493916 SERTAD4-AS1Q5TG53 156 aa13.88□□□□□ -0.19
SNIP1-203ENST00000493916 TRAV12-1A0A0B4J245 112 aa13.87□□□□□ -0.19
SNIP1-203ENST00000493916 IFI27L1Q96BM0 104 aa13.87□□□□□ -0.19
SNIP1-203ENST00000493916 UBE2BP63146 152 aa13.86□□□□□ -0.19
SNIP1-203ENST00000493916 CHTOPQ9Y3Y2 248 aaKnown RBP13.86□□□□□ -0.19
SNIP1-203ENST00000493916 TNXBP22105 4242 aa13.85□□□□□ -0.19
SNIP1-203ENST00000493916 HSBP1O75506 76 aa13.85□□□□□ -0.19
SNIP1-203ENST00000493916 COLCA2A8K830 154 aa13.84□□□□□ -0.19
SNIP1-203ENST00000493916 IGLV7-43P04211 117 aa13.84□□□□□ -0.19
SNIP1-203ENST00000493916 TMEM170BQ5T4T1 132 aa13.84□□□□□ -0.19
SNIP1-203ENST00000493916 C22orf24Q9Y442 160 aa13.84□□□□□ -0.19
SNIP1-203ENST00000493916 HMCN2Q8NDA2 5059 aa13.83□□□□□ -0.2
SNIP1-203ENST00000493916 TP73-AS1Q9UF72 201 aa13.83□□□□□ -0.2
SNIP1-203ENST00000493916 FAM19A2Q8N3H0 131 aa13.82□□□□□ -0.2
SNIP1-203ENST00000493916 LINC00310P59036 64 aa13.81□□□□□ -0.2
SNIP1-203ENST00000493916 LBHQ53QV2 105 aaPredicted RBP13.81□□□□□ -0.2
SNIP1-203ENST00000493916 SFTA2Q6UW10 78 aa13.81□□□□□ -0.2
SNIP1-203ENST00000493916 PLA2G2DQ9UNK4 145 aa13.81□□□□□ -0.2
SNIP1-203ENST00000493916 SERF1AO75920 110 aa13.79□□□□□ -0.2
SNIP1-203ENST00000493916 DIRC1Q969H9 104 aa13.79□□□□□ -0.2
SNIP1-203ENST00000493916 MRPL55Q7Z7F7 128 aaKnown RBP13.78□□□□□ -0.2
SNIP1-203ENST00000493916 TMEM223A0PJW6 202 aa13.77□□□□□ -0.21
SNIP1-203ENST00000493916 ERG28Q9UKR5 140 aa13.77□□□□□ -0.21
SNIP1-203ENST00000493916 IGLV5-37A0A075B6J1 123 aa13.76□□□□□ -0.21
SNIP1-203ENST00000493916 KRTAP10-8P60410 259 aa13.76□□□□□ -0.21
SNIP1-203ENST00000493916 COX17Q14061 63 aa13.76□□□□□ -0.21
SNIP1-203ENST00000493916 ZNF625Q96I27 306 aaPredicted RBP13.76□□□□□ -0.21
SNIP1-203ENST00000493916 NUPR1O60356 82 aa13.75□□□□□ -0.21
SNIP1-203ENST00000493916 LEPROTL1O95214 131 aa13.75□□□□□ -0.21
SNIP1-203ENST00000493916 PFN2P35080 140 aa13.75□□□□□ -0.21
SNIP1-203ENST00000493916 H0Y9J4 135 aa13.74□□□□□ -0.21
SNIP1-203ENST00000493916 LINC00167Q96N53 147 aa13.71□□□□□ -0.21
SNIP1-203ENST00000493916 SND1-IT1Q9HBX3 110 aa13.71□□□□□ -0.21
SNIP1-203ENST00000493916 HSPB8Q9UJY1 196 aa13.71□□□□□ -0.21
SNIP1-203ENST00000493916 NKAPP1Q8N9T2 125 aa13.7□□□□□ -0.22
SNIP1-203ENST00000493916 H0Y8G0 127 aa13.69□□□□□ -0.22
SNIP1-203ENST00000493916 SCO1O75880 301 aa13.68□□□□□ -0.22
SNIP1-203ENST00000493916 ZNF861PO60384 105 aa13.67□□□□□ -0.22
SNIP1-203ENST00000493916 RPL37AP8A6NKH3 93 aa13.66□□□□□ -0.22
SNIP1-203ENST00000493916 BCE1O60756 84 aa13.66□□□□□ -0.22
SNIP1-203ENST00000493916 VPREB1P12018 145 aa13.66□□□□□ -0.22
SNIP1-203ENST00000493916 PLNP26678 52 aa13.66□□□□□ -0.22
SNIP1-203ENST00000493916 GAGE10A6NGK3 116 aa13.65□□□□□ -0.22
SNIP1-203ENST00000493916 FABP4P15090 132 aa13.65□□□□□ -0.22
SNIP1-203ENST00000493916 RPL24P83731 157 aaKnown RBP13.64□□□□□ -0.23
SNIP1-203ENST00000493916 KRTAP1-4P0C5Y4 121 aa13.63□□□□□ -0.23
SNIP1-203ENST00000493916 LINC00158P58513 81 aa13.63□□□□□ -0.23
SNIP1-203ENST00000493916 HERV-K104P63124 156 aa13.63□□□□□ -0.23
SNIP1-203ENST00000493916 HIST1H2BKO60814 126 aa13.62□□□□□ -0.23
SNIP1-203ENST00000493916 HIST1H2BJP06899 126 aa13.62□□□□□ -0.23
SNIP1-203ENST00000493916 HIST1H2BOP23527 126 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms