RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 VPREB1P12018 145 aa4.87□□□□□ -1.63
VPS13B-205ENST00000493587 Q1T7F1 81 aa4.87□□□□□ -1.63
VPS13B-205ENST00000493587 ABCA2Q9BZC7 2435 aa4.87□□□□□ -1.63
VPS13B-205ENST00000493587 USP24Q9UPU5 2620 aa4.87□□□□□ -1.63
VPS13B-205ENST00000493587 HCG22E2RYF7 251 aa4.87□□□□□ -1.63
VPS13B-205ENST00000493587 CMYA5Q8N3K9 4069 aa4.87□□□□□ -1.63
VPS13B-205ENST00000493587 C1orf64Q8NEQ6 169 aa4.87□□□□□ -1.63
VPS13B-205ENST00000493587 FLNCQ14315 2725 aa4.86□□□□□ -1.63
VPS13B-205ENST00000493587 hDV103S1A0JD37 113 aa4.86□□□□□ -1.63
VPS13B-205ENST00000493587 UBR5O95071 2799 aaPredicted RBP4.86□□□□□ -1.63
VPS13B-205ENST00000493587 OXLD1Q5BKU9 147 aa4.86□□□□□ -1.63
VPS13B-205ENST00000493587 ZNF843Q8N446 348 aa4.86□□□□□ -1.63
VPS13B-205ENST00000493587 LINC01560Q8TB33 94 aa4.86□□□□□ -1.63
VPS13B-205ENST00000493587 HIVEP3Q5T1R4 2406 aa4.86□□□□□ -1.63
VPS13B-205ENST00000493587 F8W735 103 aaPredicted RBP4.85□□□□□ -1.63
VPS13B-205ENST00000493587 SERTAD4-AS1Q5TG53 156 aa4.85□□□□□ -1.63
VPS13B-205ENST00000493587 COX6A2Q02221 97 aa4.85□□□□□ -1.63
VPS13B-205ENST00000493587 PRR15LQ9BU68 103 aa4.85□□□□□ -1.63
VPS13B-205ENST00000493587 Q6ZTC4 211 aa4.85□□□□□ -1.63
VPS13B-205ENST00000493587 Q8N9L7 120 aa4.85□□□□□ -1.63
VPS13B-205ENST00000493587 CCL24O00175 119 aa4.84□□□□□ -1.63
VPS13B-205ENST00000493587 LINC00467Q9BRT7 94 aa4.84□□□□□ -1.63
VPS13B-205ENST00000493587 CELA1Q9UNI1 258 aa4.84□□□□□ -1.63
VPS13B-205ENST00000493587 IGLV1-47P01700 117 aa4.84□□□□□ -1.63
VPS13B-205ENST00000493587 LCA10Q71F78 164 aa4.84□□□□□ -1.63
VPS13B-205ENST00000493587 NKAPP1Q8N9T2 125 aa4.84□□□□□ -1.63
VPS13B-205ENST00000493587 IGKV2-28A0A075B6P5 120 aa4.84□□□□□ -1.64
VPS13B-205ENST00000493587 IGKV2D-28P01615 120 aa4.84□□□□□ -1.64
VPS13B-205ENST00000493587 C7orf65Q6ZTY9 151 aa4.83□□□□□ -1.64
VPS13B-205ENST00000493587 ANKHD1Q8IWZ3 2542 aaKnown RBP4.83□□□□□ -1.64
VPS13B-205ENST00000493587 C16orf90A8MZG2 172 aa4.83□□□□□ -1.64
VPS13B-205ENST00000493587 CCL18P55774 89 aa4.83□□□□□ -1.64
VPS13B-205ENST00000493587 PROK1P58294 105 aa4.83□□□□□ -1.64
VPS13B-205ENST00000493587 NTM-AS1Q6ZSK4 140 aa4.83□□□□□ -1.64
VPS13B-205ENST00000493587 PRR26Q8N8Z3 221 aa4.83□□□□□ -1.64
VPS13B-205ENST00000493587 CCDC140Q96MF4 163 aa4.83□□□□□ -1.64
VPS13B-205ENST00000493587 SMIM1B2RUZ4 78 aa4.82□□□□□ -1.64
VPS13B-205ENST00000493587 C19orf84I3L1E1 186 aa4.82□□□□□ -1.64
VPS13B-205ENST00000493587 CXCL6P80162 114 aa4.82□□□□□ -1.64
VPS13B-205ENST00000493587 ITLN2Q8WWU7 325 aaPredicted RBP4.82□□□□□ -1.64
VPS13B-205ENST00000493587 RNF5Q99942 180 aa4.82□□□□□ -1.64
VPS13B-205ENST00000493587 FAM30AQ9NZY2 134 aa4.82□□□□□ -1.64
VPS13B-205ENST00000493587 SPTAN1Q13813 2472 aaKnown RBP4.82□□□□□ -1.64
VPS13B-205ENST00000493587 Q8N814 137 aa4.82□□□□□ -1.64
VPS13B-205ENST00000493587 ODF3BA8MYP8 253 aa4.82□□□□□ -1.64
VPS13B-205ENST00000493587 K7EQG2 157 aa4.82□□□□□ -1.64
VPS13B-205ENST00000493587 M0R2N4 97 aa4.82□□□□□ -1.64
VPS13B-205ENST00000493587 ATP11AUNQ6ZP68 121 aa4.82□□□□□ -1.64
VPS13B-205ENST00000493587 LYNX1G3V0Z9 82 aa4.81□□□□□ -1.64
VPS13B-205ENST00000493587 LYNX1P0DP58 116 aa4.81□□□□□ -1.64
VPS13B-205ENST00000493587 IGHV3-16A0A0C4DH30 117 aa4.81□□□□□ -1.64
VPS13B-205ENST00000493587 LINC00242Q5T6M2 205 aa4.81□□□□□ -1.64
VPS13B-205ENST00000493587 DPM3Q9P2X0 92 aa4.81□□□□□ -1.64
VPS13B-205ENST00000493587 ERC2-IT1O76042 136 aa4.81□□□□□ -1.64
VPS13B-205ENST00000493587 Q6ZQT0 140 aa4.81□□□□□ -1.64
VPS13B-205ENST00000493587 DNAH3Q8TD57 4116 aa4.81□□□□□ -1.64
VPS13B-205ENST00000493587 LY6HO94772 140 aa4.8□□□□□ -1.64
VPS13B-205ENST00000493587 USP9XQ93008 2570 aaPredicted RBP4.8□□□□□ -1.64
VPS13B-205ENST00000493587 IGLV5-39A0A0G2JS06 123 aa4.8□□□□□ -1.64
VPS13B-205ENST00000493587 ATP6V0E1O15342 81 aa4.8□□□□□ -1.64
VPS13B-205ENST00000493587 IGHV3OR16-12A0A075B7B8 117 aa4.8□□□□□ -1.64
VPS13B-205ENST00000493587 CD164L2Q6UWJ8 174 aa4.8□□□□□ -1.64
VPS13B-205ENST00000493587 SPINK13Q1W4C9 94 aa4.79□□□□□ -1.64
VPS13B-205ENST00000493587 NBASA2RRP1 2371 aa4.79□□□□□ -1.64
VPS13B-205ENST00000493587 TRBV6-8A0A0A6YYG3 113 aa4.79□□□□□ -1.64
VPS13B-205ENST00000493587 Q5VV11 94 aa4.79□□□□□ -1.64
VPS13B-205ENST00000493587 DIRC1Q969H9 104 aa4.79□□□□□ -1.64
VPS13B-205ENST00000493587 CHCHD7Q9BUK0 85 aa4.79□□□□□ -1.64
VPS13B-205ENST00000493587 TENM4Q6N022 2769 aa4.79□□□□□ -1.64
VPS13B-205ENST00000493587 ANKRD17O75179 2603 aaKnown RBP4.78□□□□□ -1.64
VPS13B-205ENST00000493587 G3V318 75 aa4.78□□□□□ -1.64
VPS13B-205ENST00000493587 PSCAO43653 123 aa4.78□□□□□ -1.64
VPS13B-205ENST00000493587 LINC01006Q8NI28 216 aa4.78□□□□□ -1.64
VPS13B-205ENST00000493587 KMT2BQ9UMN6 2715 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-205ENST00000493587 CR1P17927 2039 aa4.78□□□□□ -1.64
VPS13B-205ENST00000493587 C6orf99Q4VX62 202 aa4.78□□□□□ -1.64
VPS13B-205ENST00000493587 FAM104AQ969W3 186 aa4.78□□□□□ -1.64
VPS13B-205ENST00000493587 PDE6GP18545 87 aa4.77□□□□□ -1.65
VPS13B-205ENST00000493587 PRR3P79522 188 aaKnown RBP4.77□□□□□ -1.65
VPS13B-205ENST00000493587 PHF5AQ7RTV0 110 aaKnown RBP4.77□□□□□ -1.65
VPS13B-205ENST00000493587 NPBQ8NG41 125 aa4.77□□□□□ -1.65
VPS13B-205ENST00000493587 IGLV5-45A0A087WSX0 123 aa4.77□□□□□ -1.65
VPS13B-205ENST00000493587 TRBV6-4A0A1B0GX49 114 aa4.77□□□□□ -1.65
VPS13B-205ENST00000493587 IGHV3-11P01762 117 aa4.77□□□□□ -1.65
VPS13B-205ENST00000493587 LIMD2Q9BT23 127 aa4.76□□□□□ -1.65
VPS13B-205ENST00000493587 DOPEY1Q5JWR5 2465 aa4.76□□□□□ -1.65
VPS13B-205ENST00000493587 ZFP36P26651 326 aaKnown RBP4.76□□□□□ -1.65
VPS13B-205ENST00000493587 Q6ZQY7 126 aa4.76□□□□□ -1.65
VPS13B-205ENST00000493587 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
VPS13B-205ENST00000493587 IGHV7-81A0A0B4J1V7 117 aa4.75□□□□□ -1.65
VPS13B-205ENST00000493587 MUC7Q8TAX7 377 aa4.75□□□□□ -1.65
VPS13B-205ENST00000493587 RHPN1-AS1Q9BWJ2 59 aa4.75□□□□□ -1.65
VPS13B-205ENST00000493587 OCR1Q9BZK8 76 aa4.75□□□□□ -1.65
VPS13B-205ENST00000493587 ACACBO00763 2458 aa4.75□□□□□ -1.65
VPS13B-205ENST00000493587 ANK2Q01484 3957 aa4.75□□□□□ -1.65
VPS13B-205ENST00000493587 KLLNB2CW77 178 aa4.75□□□□□ -1.65
VPS13B-205ENST00000493587 A6NN06 94 aa4.74□□□□□ -1.65
VPS13B-205ENST00000493587 A0A096LNT2 108 aa4.74□□□□□ -1.65
VPS13B-205ENST00000493587 IGHV4-28A0A0C4DH34 117 aa4.74□□□□□ -1.65
VPS13B-205ENST00000493587 A8MTW9 85 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms