RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602		D6R8Y8	96 aa		3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	SMKR1	H3BMG3	65 aa		3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	S100P	P25815	95 aa		3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	SEC61B	P60468	96 aa	Known RBP	3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	KRTAP20-1	Q3LI63	56 aa		3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	C9orf116	Q5BN46	136 aa	Predicted RBP	3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	LINC00173	Q6ZV60	143 aa		3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	LINC00337	Q8N6G1	96 aa		3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	SMIM2	Q9BVW6	85 aa		3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	CTDSP1	Q9GZU7	261 aa		3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	GEMIN7	Q9H840	131 aa	Known RBP	3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	NXT2	Q9NPJ8	142 aa	Known RBP	3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	MRPL35	Q9NZE8	188 aa	Known RBP	3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	CYSLTR1	Q9Y271	337 aa		3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	PYGO1	Q9Y3Y4	419 aa		3.12	□□□□□ -1.91
SEC13-219	ENST00000492602	TRBV30	A0A0K0K1B3	111 aa		3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	LOC389332	A0A1B0GUA5	103 aa		3.11	□□□□□ -1.91
SEC13-219	ENST00000492602		A0A1W2PNN7	141 aa		3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	NPS	P0C0P6	89 aa		3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	KRTAP6-3	Q3LI67	103 aa		3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	GAGE2E	Q4V326	116 aa		3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	RNASE13	Q5GAN3	156 aa	Known RBP	3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	PHF5A	Q7RTV0	110 aa	Known RBP	3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	LINC01561	Q8N1V8	128 aa		3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	NRAC	Q8N912	160 aa		3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	OPRPN	Q99935	248 aa	Predicted RBP	3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	GAGE2D	Q9UEU5	116 aa		3.11	□□□□□ -1.91
SEC13-219	ENST00000492602	RPL39	P62891	51 aa	Known RBP	3.1	□□□□□ -1.91
SEC13-219	ENST00000492602	HERVK_113	P63121	156 aa		3.1	□□□□□ -1.91
SEC13-219	ENST00000492602		Q8N8P6	123 aa		3.1	□□□□□ -1.91
SEC13-219	ENST00000492602	TYMSOS	Q8TAI1	123 aa		3.1	□□□□□ -1.91
SEC13-219	ENST00000492602	ALKBH7	Q9BT30	221 aa	Predicted RBP	3.1	□□□□□ -1.91
SEC13-219	ENST00000492602	TOMM7	Q9P0U1	55 aa		3.1	□□□□□ -1.91
SEC13-219	ENST00000492602	IGHV3OR16-9	A0A0B4J2B5	98 aa		3.09	□□□□□ -1.91
SEC13-219	ENST00000492602	C9orf118	A6NHY6	69 aa		3.09	□□□□□ -1.91
SEC13-219	ENST00000492602		B5MCH6	92 aa		3.09	□□□□□ -1.91
SEC13-219	ENST00000492602	NDUFC2-KCTD14	E9PQ53	114 aa		3.09	□□□□□ -1.91
SEC13-219	ENST00000492602	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	3.09	□□□□□ -1.91
SEC13-219	ENST00000492602		H3BRM9	83 aa		3.09	□□□□□ -1.91
SEC13-219	ENST00000492602	TLX1NB	P0CAT3	122 aa		3.09	□□□□□ -1.91
SEC13-219	ENST00000492602	COX19	Q49B96	90 aa		3.09	□□□□□ -1.91
SEC13-219	ENST00000492602	UNQ6190/PRO20217	Q6UXQ8	127 aa		3.09	□□□□□ -1.91
SEC13-219	ENST00000492602		Q6ZUT4	128 aa		3.09	□□□□□ -1.91
SEC13-219	ENST00000492602	SCGB3A1	Q96QR1	104 aa		3.09	□□□□□ -1.91
SEC13-219	ENST00000492602	SMCO4	Q9NRQ5	59 aa		3.09	□□□□□ -1.91
SEC13-219	ENST00000492602	MUC12	Q9UKN1	5478 aa		3.08	□□□□□ -1.92
SEC13-219	ENST00000492602		A0A087X002	238 aa		3.08	□□□□□ -1.92
SEC13-219	ENST00000492602	PRSS47	A8MTI9	375 aa		3.08	□□□□□ -1.92
SEC13-219	ENST00000492602	NPY	P01303	97 aa		3.08	□□□□□ -1.92
SEC13-219	ENST00000492602	CXCL5	P42830	114 aa		3.08	□□□□□ -1.92
SEC13-219	ENST00000492602	RPL28	P46779	137 aa	Known RBP	3.08	□□□□□ -1.92
SEC13-219	ENST00000492602	C2orf66	Q6UXQ4	117 aa		3.08	□□□□□ -1.92
SEC13-219	ENST00000492602	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	3.08	□□□□□ -1.92
SEC13-219	ENST00000492602	KRTAP11-1	Q8IUC1	163 aa		3.08	□□□□□ -1.92
SEC13-219	ENST00000492602	IGLV4-3	A0A075B6K6	122 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	TRAV9-1	A0A075B6T8	112 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602		A0A1B0GXF2	115 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602		F8VRH5	84 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602		M0QXV9	152 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	NUPR1	O60356	82 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	ATP6V1G1	O75348	118 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	ATP5L	O75964	103 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	S100A12	P80511	92 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	LINC00242	Q5T6M2	205 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	SFTA2	Q6UW10	78 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	UQCC3	Q6UW78	93 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	FA2H	Q7L5A8	372 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	ERAS	Q7Z444	233 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602		Q8IZM0	81 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	LINC00469	Q8N7U9	141 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602	NKAPP1	Q8N9T2	125 aa		3.07	□□□□□ -1.92
SEC13-219	ENST00000492602		C9JQL5	133 aa		3.06	□□□□□ -1.92
SEC13-219	ENST00000492602	NDUFA6	P56556	154 aa		3.06	□□□□□ -1.92
SEC13-219	ENST00000492602	RAB5B	P61020	215 aa		3.06	□□□□□ -1.92
SEC13-219	ENST00000492602	RPL24	P83731	157 aa	Known RBP	3.06	□□□□□ -1.92
SEC13-219	ENST00000492602	TIMM17A	Q99595	171 aa		3.06	□□□□□ -1.92
SEC13-219	ENST00000492602	TINCR	A0A1B0GVN0	87 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	LINC00587	B1AMM8	73 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	ZNF861P	O60384	105 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	UBE2A	P49459	152 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	LINC00310	P59036	64 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	FABP9	Q0Z7S8	132 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	NDUFA5	Q16718	116 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	KRTAP13-3	Q3SY46	172 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	PDZD11	Q5EBL8	140 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	C2orf82	Q6UX34	121 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	LINC00304	Q8N9R0	145 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	TOMM6	Q96B49	74 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	AMELX	Q99217	191 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	GNB1L	Q9BYB4	327 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	C6orf48	Q9UBA6	75 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	C22orf24	Q9Y442	160 aa		3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	FLG	P20930	4061 aa	Predicted RBP	3.05	□□□□□ -1.92
SEC13-219	ENST00000492602	FAM168B	A1KXE4	195 aa		3.04	□□□□□ -1.92
SEC13-219	ENST00000492602	IGIP	A6NJ69	53 aa		3.04	□□□□□ -1.92
SEC13-219	ENST00000492602	PMVK	Q15126	192 aa		3.04	□□□□□ -1.92
SEC13-219	ENST00000492602	RHEB	Q15382	184 aa		3.04	□□□□□ -1.92
SEC13-219	ENST00000492602	C10orf25	Q5T742	122 aa		3.04	□□□□□ -1.92
SEC13-219	ENST00000492602	MRPL55	Q7Z7F7	128 aa	Known RBP	3.04	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms