RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ORAOV1Q8WV07 137 aa8.14□□□□□ -1.11
SEC61A1-206ENST00000491668 MRPL35Q9NZE8 188 aaKnown RBP8.14□□□□□ -1.11
SEC61A1-206ENST00000491668 CDKN2A-AS1Q9UH64 79 aa8.14□□□□□ -1.11
SEC61A1-206ENST00000491668 PKHD1L1Q86WI1 4243 aa8.14□□□□□ -1.11
SEC61A1-206ENST00000491668 IGLV4-69A0A075B6H9 119 aa8.13□□□□□ -1.11
SEC61A1-206ENST00000491668 SYS1-DBNDD2H3BUS1 97 aa8.13□□□□□ -1.11
SEC61A1-206ENST00000491668 ODF1Q14990 250 aa8.13□□□□□ -1.11
SEC61A1-206ENST00000491668 C15orf56Q8N910 161 aa8.13□□□□□ -1.11
SEC61A1-206ENST00000491668 FAT3Q8TDW7 4589 aa8.13□□□□□ -1.11
SEC61A1-206ENST00000491668 C20orf202A1L168 122 aa8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 C5orf52A6NGY3 159 aa8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 C11orf86A6NJI1 115 aa8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 PRSS2P07478 247 aa8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 PLNP26678 52 aa8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 CNBPP62633 177 aaKnown RBP8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 PET117Q6UWS5 81 aa8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 LINC01561Q8N1V8 128 aa8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 OR10D4PQ8NGN7 298 aa8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 HIST1H2BLQ99880 126 aa8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 PMCHL2Q9BQD1 86 aa8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 TOMM7Q9P0U1 55 aa8.12□□□□□ -1.11
SEC61A1-206ENST00000491668 IGHV3-64A0A075B6Q5 118 aa8.11□□□□□ -1.11
SEC61A1-206ENST00000491668 DPM2O94777 84 aa8.11□□□□□ -1.11
SEC61A1-206ENST00000491668 SPINK8P0C7L1 97 aa8.11□□□□□ -1.11
SEC61A1-206ENST00000491668 C3orf79P0CE67 100 aa8.11□□□□□ -1.11
SEC61A1-206ENST00000491668 SPAG11BQ08648 103 aa8.11□□□□□ -1.11
SEC61A1-206ENST00000491668 IGLV5-45A0A087WSX0 123 aa8.1□□□□□ -1.11
SEC61A1-206ENST00000491668 GVQW2A0A096LPI5 108 aaPredicted RBP8.1□□□□□ -1.11
SEC61A1-206ENST00000491668 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.1□□□□□ -1.11
SEC61A1-206ENST00000491668 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
SEC61A1-206ENST00000491668 IGKCP01834 107 aa8.1□□□□□ -1.11
SEC61A1-206ENST00000491668 ZNF22P17026 224 aaPredicted RBP8.1□□□□□ -1.11
SEC61A1-206ENST00000491668 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
SEC61A1-206ENST00000491668 HNRNPA3P51991 378 aaKnown RBP8.09□□□□□ -1.11
SEC61A1-206ENST00000491668 C6orf226Q5I0X4 101 aa8.09□□□□□ -1.11
SEC61A1-206ENST00000491668 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
SEC61A1-206ENST00000491668 SMIM1B2RUZ4 78 aa8.08□□□□□ -1.12
SEC61A1-206ENST00000491668 CKS1BP61024 79 aa8.08□□□□□ -1.12
SEC61A1-206ENST00000491668 LINC01545Q5VT33 79 aa8.08□□□□□ -1.12
SEC61A1-206ENST00000491668 CAMK2N2Q96S95 79 aa8.08□□□□□ -1.12
SEC61A1-206ENST00000491668 CHTF8P0CG12 524 aa8.07□□□□□ -1.12
SEC61A1-206ENST00000491668 HERVK_113P61574 105 aa8.07□□□□□ -1.12
SEC61A1-206ENST00000491668 COX7B2Q8TF08 81 aa8.07□□□□□ -1.12
SEC61A1-206ENST00000491668 C2orf48Q96LS8 159 aa8.07□□□□□ -1.12
SEC61A1-206ENST00000491668 J3QL48 77 aa8.06□□□□□ -1.12
SEC61A1-206ENST00000491668 NDUFA1O15239 70 aa8.06□□□□□ -1.12
SEC61A1-206ENST00000491668 AKR1D1P51857 326 aa8.06□□□□□ -1.12
SEC61A1-206ENST00000491668 SYCNQ0VAF6 134 aa8.06□□□□□ -1.12
SEC61A1-206ENST00000491668 Q8IZM0 81 aa8.06□□□□□ -1.12
SEC61A1-206ENST00000491668 CARD19Q96LW7 228 aa8.06□□□□□ -1.12
SEC61A1-206ENST00000491668 TMEM223A0PJW6 202 aa8.05□□□□□ -1.12
SEC61A1-206ENST00000491668 F8WDY8 70 aa8.05□□□□□ -1.12
SEC61A1-206ENST00000491668 LCE2BO14633 110 aa8.05□□□□□ -1.12
SEC61A1-206ENST00000491668 RPL37AP61513 92 aaKnown RBP8.05□□□□□ -1.12
SEC61A1-206ENST00000491668 SCGB1D1O95968 90 aa8.04□□□□□ -1.12
SEC61A1-206ENST00000491668 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
SEC61A1-206ENST00000491668 A0A087WYN8 130 aa8.03□□□□□ -1.12
SEC61A1-206ENST00000491668 IGLV5-39A0A0G2JS06 123 aa8.03□□□□□ -1.12
SEC61A1-206ENST00000491668 CXCL5P42830 114 aa8.03□□□□□ -1.12
SEC61A1-206ENST00000491668 KIAA0087Q14695 138 aa8.03□□□□□ -1.12
SEC61A1-206ENST00000491668 C2orf82Q6UX34 121 aa8.03□□□□□ -1.12
SEC61A1-206ENST00000491668 Q6ZRU5 148 aa8.03□□□□□ -1.12
SEC61A1-206ENST00000491668 HMCN2Q8NDA2 5059 aa8.03□□□□□ -1.12
SEC61A1-206ENST00000491668 UNQ6190/PRO20217Q6UXQ8 127 aa8.02□□□□□ -1.13
SEC61A1-206ENST00000491668 ATOH7Q8N100 152 aa8.02□□□□□ -1.13
SEC61A1-206ENST00000491668 PKIGQ9Y2B9 76 aa8.02□□□□□ -1.13
SEC61A1-206ENST00000491668 PLEKHB2Q96CS7 222 aa8.01□□□□□ -1.13
SEC61A1-206ENST00000491668 PLAC8Q9NZF1 115 aa8.01□□□□□ -1.13
SEC61A1-206ENST00000491668 TRBV30A0A0K0K1B3 111 aa8□□□□□ -1.13
SEC61A1-206ENST00000491668 HSBP1L1C9JCN9 74 aa8□□□□□ -1.13
SEC61A1-206ENST00000491668 LEPROTO15243 131 aa8□□□□□ -1.13
SEC61A1-206ENST00000491668 LGALS3P17931 250 aaKnown RBP8□□□□□ -1.13
SEC61A1-206ENST00000491668 C10orf25Q5T742 122 aa8□□□□□ -1.13
SEC61A1-206ENST00000491668 SFTA2Q6UW10 78 aa8□□□□□ -1.13
SEC61A1-206ENST00000491668 STPG4Q8N801 248 aa8□□□□□ -1.13
SEC61A1-206ENST00000491668 OXTP01178 125 aa7.99□□□□□ -1.13
SEC61A1-206ENST00000491668 DPH3Q96FX2 82 aa7.99□□□□□ -1.13
SEC61A1-206ENST00000491668 C6orf48Q9UBA6 75 aa7.99□□□□□ -1.13
SEC61A1-206ENST00000491668 A0A096LNI7 61 aa7.98□□□□□ -1.13
SEC61A1-206ENST00000491668 LOC107984640A0A0U1RRK4 108 aa7.98□□□□□ -1.13
SEC61A1-206ENST00000491668 E9PLD3 99 aa7.98□□□□□ -1.13
SEC61A1-206ENST00000491668 J3QQQ9 107 aa7.98□□□□□ -1.13
SEC61A1-206ENST00000491668 SMCPP49901 116 aaPredicted RBP7.98□□□□□ -1.13
SEC61A1-206ENST00000491668 RPL18AQ02543 176 aaKnown RBP7.98□□□□□ -1.13
SEC61A1-206ENST00000491668 RNF151Q2KHN1 245 aa7.98□□□□□ -1.13
SEC61A1-206ENST00000491668 IGKV2-24A0A0C4DH68 120 aa7.97□□□□□ -1.13
SEC61A1-206ENST00000491668 MYMXA0A1B0GTQ4 84 aa7.97□□□□□ -1.13
SEC61A1-206ENST00000491668 ZNF625Q96I27 306 aaPredicted RBP7.97□□□□□ -1.13
SEC61A1-206ENST00000491668 NDUFA12Q9UI09 145 aa7.97□□□□□ -1.13
SEC61A1-206ENST00000491668 MT1HL1P0DM35 61 aa7.96□□□□□ -1.14
SEC61A1-206ENST00000491668 GAGE2BQ13066 116 aa7.96□□□□□ -1.14
SEC61A1-206ENST00000491668 MAJINQ3KP22 176 aa7.96□□□□□ -1.14
SEC61A1-206ENST00000491668 C9orf116Q5BN46 136 aaPredicted RBP7.96□□□□□ -1.14
SEC61A1-206ENST00000491668 PFN2P35080 140 aa7.95□□□□□ -1.14
SEC61A1-206ENST00000491668 NMUP48645 174 aa7.95□□□□□ -1.14
SEC61A1-206ENST00000491668 TSPEAR-AS2P59090 65 aa7.95□□□□□ -1.14
SEC61A1-206ENST00000491668 HERV-K104P63124 156 aa7.95□□□□□ -1.14
SEC61A1-206ENST00000491668 JOSD1Q15040 202 aaPredicted RBP7.95□□□□□ -1.14
SEC61A1-206ENST00000491668 MEIG1Q5JSS6 88 aa7.95□□□□□ -1.14
SEC61A1-206ENST00000491668 NDUFC2-KCTD14E9PQ53 114 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms