RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ORMDL2Q53FV1 153 aa5.1□□□□□ -1.59
LSM2-213ENST00000491421 PHF5AQ7RTV0 110 aaKnown RBP5.1□□□□□ -1.59
LSM2-213ENST00000491421 C6orf48Q9UBA6 75 aa5.1□□□□□ -1.59
LSM2-213ENST00000491421 PSORS1C2Q9UIG4 136 aa5.1□□□□□ -1.59
LSM2-213ENST00000491421 TNXBP22105 4242 aa5.09□□□□□ -1.59
LSM2-213ENST00000491421 LOC105371267A0A1B0GV96 52 aa5.09□□□□□ -1.59
LSM2-213ENST00000491421 K7EMI3 77 aa5.09□□□□□ -1.59
LSM2-213ENST00000491421 TLX1NBP0CAT3 122 aa5.09□□□□□ -1.59
LSM2-213ENST00000491421 UBE2V1Q13404 147 aa5.09□□□□□ -1.59
LSM2-213ENST00000491421 KIAA0087Q14695 138 aa5.09□□□□□ -1.59
LSM2-213ENST00000491421 GAGE2EQ4V326 116 aa5.09□□□□□ -1.59
LSM2-213ENST00000491421 CLLU1Q5K131 121 aa5.09□□□□□ -1.59
LSM2-213ENST00000491421 NXT2Q9NPJ8 142 aaKnown RBP5.09□□□□□ -1.59
LSM2-213ENST00000491421 GAGE2DQ9UEU5 116 aa5.09□□□□□ -1.59
LSM2-213ENST00000491421 TRBV30A0A0K0K1B3 111 aa5.08□□□□□ -1.6
LSM2-213ENST00000491421 FAM168BA1KXE4 195 aa5.08□□□□□ -1.6
LSM2-213ENST00000491421 NPSP0C0P6 89 aa5.08□□□□□ -1.6
LSM2-213ENST00000491421 C5orf47Q569G3 176 aa5.08□□□□□ -1.6
LSM2-213ENST00000491421 C1orf137Q5JT78 98 aa5.08□□□□□ -1.6
LSM2-213ENST00000491421 ZC2HC1BQ5TFG8 222 aa5.08□□□□□ -1.6
LSM2-213ENST00000491421 C2orf82Q6UX34 121 aa5.08□□□□□ -1.6
LSM2-213ENST00000491421 LINC00173Q6ZV60 143 aa5.08□□□□□ -1.6
LSM2-213ENST00000491421 FAM19A5Q7Z5A7 132 aaPredicted RBP5.08□□□□□ -1.6
LSM2-213ENST00000491421 IGIPA6NJ69 53 aa5.07□□□□□ -1.6
LSM2-213ENST00000491421 PRYO14603 147 aa5.07□□□□□ -1.6
LSM2-213ENST00000491421 PRSS2P07478 247 aa5.07□□□□□ -1.6
LSM2-213ENST00000491421 ADCYAP1P18509 176 aa5.07□□□□□ -1.6
LSM2-213ENST00000491421 G0S2P27469 103 aa5.07□□□□□ -1.6
LSM2-213ENST00000491421 KRTAP10-8P60410 259 aa5.07□□□□□ -1.6
LSM2-213ENST00000491421 PAPPA-AS1Q5QFB9 102 aa5.07□□□□□ -1.6
LSM2-213ENST00000491421 UQCC3Q6UW78 93 aa5.07□□□□□ -1.6
LSM2-213ENST00000491421 LINC01561Q8N1V8 128 aa5.07□□□□□ -1.6
LSM2-213ENST00000491421 PACRGQ96M98 296 aaPredicted RBP5.07□□□□□ -1.6
LSM2-213ENST00000491421 AMELXQ99217 191 aa5.07□□□□□ -1.6
LSM2-213ENST00000491421 TRAV9-1A0A075B6T8 112 aa5.06□□□□□ -1.6
LSM2-213ENST00000491421 TMEM218A2RU14 115 aa5.06□□□□□ -1.6
LSM2-213ENST00000491421 NDUFC2-KCTD14E9PQ53 114 aa5.06□□□□□ -1.6
LSM2-213ENST00000491421 M0QXV9 152 aa5.06□□□□□ -1.6
LSM2-213ENST00000491421 CKS1BP61024 79 aa5.06□□□□□ -1.6
LSM2-213ENST00000491421 KIAA1644Q3SXP7 199 aa5.06□□□□□ -1.6
LSM2-213ENST00000491421 TOMM7Q9P0U1 55 aa5.06□□□□□ -1.6
LSM2-213ENST00000491421 LRP2P98164 4655 aa5.06□□□□□ -1.6
LSM2-213ENST00000491421 IGLV7-43P04211 117 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 LORP23490 312 aaPredicted RBP5.05□□□□□ -1.6
LSM2-213ENST00000491421 S100PP25815 95 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 HERVK_113P63121 156 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 UBE2BP63146 152 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 SEC11AP67812 179 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 GAGE2AQ6NT46 116 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 FAM19A3Q7Z5A8 133 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 KRTAP11-1Q8IUC1 163 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 Q8IZM0 81 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 DIRC1Q969H9 104 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 TOMM6Q96B49 74 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 TIMM17AQ99595 171 aa5.05□□□□□ -1.6
LSM2-213ENST00000491421 C9orf129Q5T035 196 aaKnown RBP5.04□□□□□ -1.6
LSM2-213ENST00000491421 KRTAP7-1Q8IUC3 87 aa5.04□□□□□ -1.6
LSM2-213ENST00000491421 SCGB3A1Q96QR1 104 aa5.04□□□□□ -1.6
LSM2-213ENST00000491421 CDKN2A-AS1Q9UH64 79 aa5.04□□□□□ -1.6
LSM2-213ENST00000491421 IFITM2Q01629 132 aa5.03□□□□□ -1.6
LSM2-213ENST00000491421 SEC11CQ9BY50 192 aa5.03□□□□□ -1.6
LSM2-213ENST00000491421 GNB1LQ9BYB4 327 aa5.03□□□□□ -1.6
LSM2-213ENST00000491421 LINC01549A6NIU2 74 aa5.02□□□□□ -1.61
LSM2-213ENST00000491421 F8VRH5 84 aa5.02□□□□□ -1.61
LSM2-213ENST00000491421 H0Y9J4 135 aa5.02□□□□□ -1.61
LSM2-213ENST00000491421 HSBP1O75506 76 aa5.02□□□□□ -1.61
LSM2-213ENST00000491421 COMMD7Q86VX2 200 aa5.02□□□□□ -1.61
LSM2-213ENST00000491421 XAGE1AQ9HD64 81 aa5.02□□□□□ -1.61
LSM2-213ENST00000491421 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
LSM2-213ENST00000491421 TINCRA0A1B0GVN0 87 aa5.01□□□□□ -1.61
LSM2-213ENST00000491421 LINC01546A6NGU7 62 aa5.01□□□□□ -1.61
LSM2-213ENST00000491421 CXCL5P42830 114 aa5.01□□□□□ -1.61
LSM2-213ENST00000491421 COX19Q49B96 90 aa5.01□□□□□ -1.61
LSM2-213ENST00000491421 FA2HQ7L5A8 372 aa5.01□□□□□ -1.61
LSM2-213ENST00000491421 PRR26Q8N8Z3 221 aa5.01□□□□□ -1.61
LSM2-213ENST00000491421 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
LSM2-213ENST00000491421 SMIM1B2RUZ4 78 aa5□□□□□ -1.61
LSM2-213ENST00000491421 FABP9Q0Z7S8 132 aa5□□□□□ -1.61
LSM2-213ENST00000491421 PDZD11Q5EBL8 140 aa5□□□□□ -1.61
LSM2-213ENST00000491421 BOD1L2Q8IYS8 172 aa5□□□□□ -1.61
LSM2-213ENST00000491421 COX7B2Q8TF08 81 aa5□□□□□ -1.61
LSM2-213ENST00000491421 MAP1LC3CQ9BXW4 147 aa5□□□□□ -1.61
LSM2-213ENST00000491421 CST9LQ9H4G1 147 aa5□□□□□ -1.61
LSM2-213ENST00000491421 RPS10P5Q9NQ39 176 aa5□□□□□ -1.61
LSM2-213ENST00000491421 SMCO4Q9NRQ5 59 aa5□□□□□ -1.61
LSM2-213ENST00000491421 C22orf24Q9Y442 160 aa5□□□□□ -1.61
LSM2-213ENST00000491421 RNF213Q63HN8 5207 aa5□□□□□ -1.61
LSM2-213ENST00000491421 IGLV5-45A0A087WSX0 123 aa4.99□□□□□ -1.61
LSM2-213ENST00000491421 RPL13AP40429 203 aaKnown RBP4.99□□□□□ -1.61
LSM2-213ENST00000491421 PMVKQ15126 192 aa4.99□□□□□ -1.61
LSM2-213ENST00000491421 RHEBQ15382 184 aa4.99□□□□□ -1.61
LSM2-213ENST00000491421 CARHSP1Q9Y2V2 147 aaKnown RBP4.99□□□□□ -1.61
LSM2-213ENST00000491421 IGLV1-50A0A075B6I6 118 aa4.98□□□□□ -1.61
LSM2-213ENST00000491421 NUPR1O60356 82 aa4.98□□□□□ -1.61
LSM2-213ENST00000491421 SPINK8P0C7L1 97 aa4.98□□□□□ -1.61
LSM2-213ENST00000491421 S100A1P23297 94 aa4.98□□□□□ -1.61
LSM2-213ENST00000491421 C10orf91Q5T1B1 145 aa4.98□□□□□ -1.61
LSM2-213ENST00000491421 TP73-AS1Q9UF72 201 aa4.98□□□□□ -1.61
LSM2-213ENST00000491421 H3BRM9 83 aa4.97□□□□□ -1.61
LSM2-213ENST00000491421 ZNF861PO60384 105 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms