RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 UBR4Q5T4S7 5183 aa-0.71□□□□□ -2.52
SEMA3A-207ENST00000490883 ADGRL2O95490 1459 aa-0.71□□□□□ -2.52
SEMA3A-207ENST00000490883 NAP1L6A6NFF2 107 aa-0.71□□□□□ -2.52
SEMA3A-207ENST00000490883 SPINK4O60575 86 aa-0.71□□□□□ -2.52
SEMA3A-207ENST00000490883 C2orf88Q9BSF0 95 aa-0.71□□□□□ -2.52
SEMA3A-207ENST00000490883 PRO1854Q9UHT4 67 aa-0.71□□□□□ -2.52
SEMA3A-207ENST00000490883 DNAH6Q9C0G6 4158 aa-0.72□□□□□ -2.52
SEMA3A-207ENST00000490883 MUC17Q685J3 4493 aa-0.72□□□□□ -2.52
SEMA3A-207ENST00000490883 H3BQ15 152 aa-0.72□□□□□ -2.52
SEMA3A-207ENST00000490883 TRAPPC2P0DI81 140 aa-0.72□□□□□ -2.52
SEMA3A-207ENST00000490883 TRAPPC2BP0DI82 140 aa-0.72□□□□□ -2.52
SEMA3A-207ENST00000490883 SFTA2Q6UW10 78 aa-0.72□□□□□ -2.52
SEMA3A-207ENST00000490883 FDCSPQ8NFU4 85 aa-0.72□□□□□ -2.52
SEMA3A-207ENST00000490883 PRO1933Q9H354 126 aa-0.72□□□□□ -2.52
SEMA3A-207ENST00000490883 DIP2CQ9Y2E4 1556 aa-0.72□□□□□ -2.52
SEMA3A-207ENST00000490883 MRC2Q9UBG0 1479 aa-0.73□□□□□ -2.53
SEMA3A-207ENST00000490883 A0A1B0GWA3 101 aa-0.73□□□□□ -2.53
SEMA3A-207ENST00000490883 FAM223BA6NKX1 122 aa-0.73□□□□□ -2.53
SEMA3A-207ENST00000490883 LCN9Q8WX39 176 aa-0.73□□□□□ -2.53
SEMA3A-207ENST00000490883 SVEP1Q4LDE5 3571 aa-0.73□□□□□ -2.53
SEMA3A-207ENST00000490883 C1orf167Q5SNV9 1468 aa-0.73□□□□□ -2.53
SEMA3A-207ENST00000490883 TGP01266 2768 aa-0.74□□□□□ -2.53
SEMA3A-207ENST00000490883 LINC00846Q9NV44 126 aa-0.74□□□□□ -2.53
SEMA3A-207ENST00000490883 PKHD1L1Q86WI1 4243 aa-0.74□□□□□ -2.53
SEMA3A-207ENST00000490883 MAPKBP1O60336 1514 aa-0.74□□□□□ -2.53
SEMA3A-207ENST00000490883 MXRA5Q9NR99 2828 aa-0.74□□□□□ -2.53
SEMA3A-207ENST00000490883 SETBP1Q9Y6X0 1596 aa-0.74□□□□□ -2.53
SEMA3A-207ENST00000490883 ITPR3Q14573 2671 aa-0.75□□□□□ -2.53
SEMA3A-207ENST00000490883 LOC730098B7Z3J9 87 aa-0.75□□□□□ -2.53
SEMA3A-207ENST00000490883 S100A1P23297 94 aa-0.75□□□□□ -2.53
SEMA3A-207ENST00000490883 SPRR2AP35326 72 aa-0.75□□□□□ -2.53
SEMA3A-207ENST00000490883 TMEM203Q969S6 136 aa-0.75□□□□□ -2.53
SEMA3A-207ENST00000490883 C12orf57Q99622 126 aa-0.75□□□□□ -2.53
SEMA3A-207ENST00000490883 CNOT1A5YKK6 2376 aaKnown RBP-0.75□□□□□ -2.53
SEMA3A-207ENST00000490883 NRKQ7Z2Y5 1582 aa-0.75□□□□□ -2.53
SEMA3A-207ENST00000490883 SCN7AQ01118 1682 aa-0.75□□□□□ -2.53
SEMA3A-207ENST00000490883 KIAA1109Q2LD37 5005 aa-0.76□□□□□ -2.53
SEMA3A-207ENST00000490883 SONP18583 2426 aaKnown RBP-0.76□□□□□ -2.53
SEMA3A-207ENST00000490883 EPG5Q9HCE0 2579 aa-0.76□□□□□ -2.53
SEMA3A-207ENST00000490883 LINC00587B1AMM8 73 aa-0.76□□□□□ -2.53
SEMA3A-207ENST00000490883 SAA2P0DJI9 122 aaPredicted RBP-0.76□□□□□ -2.53
SEMA3A-207ENST00000490883 SARNPP82979 210 aaKnown RBP-0.76□□□□□ -2.53
SEMA3A-207ENST00000490883 DEFB105AQ8NG35 78 aa-0.76□□□□□ -2.53
SEMA3A-207ENST00000490883 GNG8Q9UK08 70 aa-0.76□□□□□ -2.53
SEMA3A-207ENST00000490883 KIAA0556O60303 1618 aa-0.76□□□□□ -2.53
SEMA3A-207ENST00000490883 NBPF19A0A087WUL8 3843 aa-0.76□□□□□ -2.53
SEMA3A-207ENST00000490883 HECTD1Q9ULT8 2610 aa-0.77□□□□□ -2.53
SEMA3A-207ENST00000490883 ARHGAP5Q13017 1502 aa-0.77□□□□□ -2.53
SEMA3A-207ENST00000490883 PZPP20742 1482 aa-0.77□□□□□ -2.53
SEMA3A-207ENST00000490883 SPRR2EP22531 72 aa-0.77□□□□□ -2.53
SEMA3A-207ENST00000490883 KLK9Q2XQG4 91 aa-0.77□□□□□ -2.53
SEMA3A-207ENST00000490883 USMG5Q96IX5 58 aa-0.77□□□□□ -2.53
SEMA3A-207ENST00000490883 FXYD6Q9H0Q3 95 aa-0.77□□□□□ -2.53
SEMA3A-207ENST00000490883 USP9YO00507 2555 aaPredicted RBP-0.77□□□□□ -2.53
SEMA3A-207ENST00000490883 BIRC6Q9NR09 4857 aa-0.77□□□□□ -2.53
SEMA3A-207ENST00000490883 EIF4G3O43432 1585 aaKnown RBP-0.78□□□□□ -2.53
SEMA3A-207ENST00000490883 MYO18BQ8IUG5 2567 aa-0.78□□□□□ -2.53
SEMA3A-207ENST00000490883 SPHKAPQ2M3C7 1700 aa-0.78□□□□□ -2.53
SEMA3A-207ENST00000490883 VPS13DQ5THJ4 4388 aa-0.78□□□□□ -2.53
SEMA3A-207ENST00000490883 DNAH3Q8TD57 4116 aa-0.79□□□□□ -2.54
SEMA3A-207ENST00000490883 COX8AP10176 69 aa-0.79□□□□□ -2.54
SEMA3A-207ENST00000490883 SNCAP37840 140 aa-0.79□□□□□ -2.54
SEMA3A-207ENST00000490883 MRPS10P82664 201 aaKnown RBP-0.79□□□□□ -2.54
SEMA3A-207ENST00000490883 A0A0G2JMZ2 1700 aa-0.79□□□□□ -2.54
SEMA3A-207ENST00000490883 COL4A6Q14031 1691 aa-0.79□□□□□ -2.54
SEMA3A-207ENST00000490883 RYR2Q92736 4967 aa-0.79□□□□□ -2.54
SEMA3A-207ENST00000490883 NUP188Q5SRE5 1749 aa-0.8□□□□□ -2.54
SEMA3A-207ENST00000490883 XRN1Q8IZH2 1706 aaKnown RBP-0.8□□□□□ -2.54
SEMA3A-207ENST00000490883 LAMA2P24043 3122 aaKnown RBP-0.8□□□□□ -2.54
SEMA3A-207ENST00000490883 CRYM-AS1A6NIL9 109 aa-0.8□□□□□ -2.54
SEMA3A-207ENST00000490883 KRTDAPP60985 99 aa-0.8□□□□□ -2.54
SEMA3A-207ENST00000490883 KRTAP6-2Q3LI66 62 aa-0.8□□□□□ -2.54
SEMA3A-207ENST00000490883 DNAH2Q9P225 4427 aa-0.8□□□□□ -2.54
SEMA3A-207ENST00000490883 FASNP49327 2511 aaKnown RBP-0.81□□□□□ -2.54
SEMA3A-207ENST00000490883 TOP2BQ02880 1626 aa-0.81□□□□□ -2.54
SEMA3A-207ENST00000490883 FAT3Q8TDW7 4589 aa-0.81□□□□□ -2.54
SEMA3A-207ENST00000490883 PDCD11Q14690 1871 aaKnown RBP-0.81□□□□□ -2.54
SEMA3A-207ENST00000490883 SYS1-DBNDD2H3BUS1 97 aa-0.81□□□□□ -2.54
SEMA3A-207ENST00000490883 M0R2T5 61 aa-0.81□□□□□ -2.54
SEMA3A-207ENST00000490883 CGREF1Q99674 301 aa-0.81□□□□□ -2.54
SEMA3A-207ENST00000490883 PLEKHH2Q8IVE3 1493 aa-0.81□□□□□ -2.54
SEMA3A-207ENST00000490883 TMEM262E9PQX1 116 aa-0.82□□□□□ -2.54
SEMA3A-207ENST00000490883 SEC11AP67812 179 aa-0.82□□□□□ -2.54
SEMA3A-207ENST00000490883 FMN2Q9NZ56 1722 aa-0.82□□□□□ -2.54
SEMA3A-207ENST00000490883 hADV29S1A0JD25 119 aa-0.83□□□□□ -2.54
SEMA3A-207ENST00000490883 HSD52Q0P140 79 aa-0.83□□□□□ -2.54
SEMA3A-207ENST00000490883 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.83□□□□□ -2.54
SEMA3A-207ENST00000490883 PCNX1Q96RV3 2341 aa-0.83□□□□□ -2.54
SEMA3A-207ENST00000490883 GTF2H5Q6ZYL4 71 aa-0.84□□□□□ -2.54
SEMA3A-207ENST00000490883 PLECQ15149 4684 aaKnown RBP-0.84□□□□□ -2.54
SEMA3A-207ENST00000490883 TEP1Q99973 2627 aaKnown RBP-0.85□□□□□ -2.54
SEMA3A-207ENST00000490883 IQSEC2Q5JU85 1478 aa-0.85□□□□□ -2.55
SEMA3A-207ENST00000490883 CC2D2AQ9P2K1 1620 aa-0.85□□□□□ -2.55
SEMA3A-207ENST00000490883 LAMA3Q16787 3333 aa-0.85□□□□□ -2.55
SEMA3A-207ENST00000490883 PKD1P98161 4303 aa-0.85□□□□□ -2.55
SEMA3A-207ENST00000490883 CPSF4LA6NMK7 179 aaKnown RBP-0.85□□□□□ -2.55
SEMA3A-207ENST00000490883 CHD1O14646 1710 aa-0.85□□□□□ -2.55
SEMA3A-207ENST00000490883 APLNQ9ULZ1 77 aa-0.85□□□□□ -2.55
SEMA3A-207ENST00000490883 NLRP1Q9C000 1473 aa-0.86□□□□□ -2.55
SEMA3A-207ENST00000490883 A0A087WVE0 104 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms