RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 TMEM223A0PJW6 202 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 TSTD3H0UI37 97 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 IGHV3-30P01768 117 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 IGHV3-33P01772 117 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 ANGP03950 147 aaKnown RBP5.06□□□□□ -1.6
CLDN1-202ENST00000490800 IGHV3-30-3P0DP02 117 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 IGHV3-30-5P0DP03 117 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 HERVK_113P63121 156 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 CLPSL2Q6UWE3 100 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 LINC00269Q8N2A0 174 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 LINC00469Q8N7U9 141 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 MAPKAPK5-AS1Q8N8E1 139 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 C14orf144Q96I85 54 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 GEMIN7Q9H840 131 aaKnown RBP5.06□□□□□ -1.6
CLDN1-202ENST00000490800 CDKN2A-AS1Q9UH64 79 aa5.06□□□□□ -1.6
CLDN1-202ENST00000490800 E9PLD3 99 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 DNAH10OSP0CZ25 163 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 COX8AP10176 69 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 NMUP48645 174 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 HERVK_113P61574 105 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 SEC11AP67812 179 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 REG3AQ06141 175 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 LINC01556Q5JQF7 62 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 PCP2Q8IVA1 136 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 PRR34Q9NV39 138 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 TP73-AS1Q9UF72 201 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 KLK12Q9UKR0 248 aa5.05□□□□□ -1.6
CLDN1-202ENST00000490800 PCP4L1A6NKN8 68 aa5.04□□□□□ -1.6
CLDN1-202ENST00000490800 H3BRM9 83 aa5.04□□□□□ -1.6
CLDN1-202ENST00000490800 CCL25O15444 150 aa5.04□□□□□ -1.6
CLDN1-202ENST00000490800 SPINK8P0C7L1 97 aa5.04□□□□□ -1.6
CLDN1-202ENST00000490800 TSPEAR-AS2P59090 65 aa5.04□□□□□ -1.6
CLDN1-202ENST00000490800 SS18Q15532 418 aa5.04□□□□□ -1.6
CLDN1-202ENST00000490800 ENHOQ6UWT2 76 aa5.04□□□□□ -1.6
CLDN1-202ENST00000490800 Q6ZRN7 208 aaPredicted RBP5.04□□□□□ -1.6
CLDN1-202ENST00000490800 BOD1L2Q8IYS8 172 aa5.04□□□□□ -1.6
CLDN1-202ENST00000490800 MIEN1Q9BRT3 115 aa5.04□□□□□ -1.6
CLDN1-202ENST00000490800 TTTY13Q9BZ97 58 aa5.04□□□□□ -1.6
CLDN1-202ENST00000490800 UQCR10Q9UDW1 63 aa5.04□□□□□ -1.6
CLDN1-202ENST00000490800 IGHV3-64A0A075B6Q5 118 aa5.03□□□□□ -1.6
CLDN1-202ENST00000490800 TRAV8-3A0A0A6YYJ7 113 aa5.03□□□□□ -1.6
CLDN1-202ENST00000490800 IGHV3OR16-9A0A0B4J2B5 98 aa5.03□□□□□ -1.6
CLDN1-202ENST00000490800 IGHV1-58A0A0C4DH39 117 aa5.03□□□□□ -1.6
CLDN1-202ENST00000490800 IGLV5-39A0A0G2JS06 123 aa5.03□□□□□ -1.6
CLDN1-202ENST00000490800 LEPROTO15243 131 aa5.03□□□□□ -1.6
CLDN1-202ENST00000490800 DLEU1O43261 78 aa5.03□□□□□ -1.6
CLDN1-202ENST00000490800 FUSP35637 526 aaKnown RBP eCLIP5.03□□□□□ -1.6
CLDN1-202ENST00000490800 XCL1P47992 114 aa5.03□□□□□ -1.6
CLDN1-202ENST00000490800 SLC25A34Q6PIV7 304 aa5.03□□□□□ -1.6
CLDN1-202ENST00000490800 CHCHD10Q8WYQ3 142 aaPredicted RBP5.03□□□□□ -1.6
CLDN1-202ENST00000490800 UBE2WQ96B02 151 aa5.03□□□□□ -1.6
CLDN1-202ENST00000490800 IGLV10-54A0A075B6I4 117 aa5.02□□□□□ -1.61
CLDN1-202ENST00000490800 A0A087WZ39 114 aa5.02□□□□□ -1.61
CLDN1-202ENST00000490800 SMIM1B2RUZ4 78 aa5.02□□□□□ -1.61
CLDN1-202ENST00000490800 J3QQQ9 107 aa5.02□□□□□ -1.61
CLDN1-202ENST00000490800 DDTP30046 118 aa5.02□□□□□ -1.61
CLDN1-202ENST00000490800 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
CLDN1-202ENST00000490800 CD164L2Q6UWJ8 174 aa5.02□□□□□ -1.61
CLDN1-202ENST00000490800 C5orf38Q86SI9 138 aa5.02□□□□□ -1.61
CLDN1-202ENST00000490800 PLEKHB2Q96CS7 222 aa5.02□□□□□ -1.61
CLDN1-202ENST00000490800 FAT1Q14517 4588 aa5.02□□□□□ -1.61
CLDN1-202ENST00000490800 TRAV8-4A0A0B4J246 113 aa5.01□□□□□ -1.61
CLDN1-202ENST00000490800 CRPP02741 224 aa5.01□□□□□ -1.61
CLDN1-202ENST00000490800 MIAQ16674 131 aa5.01□□□□□ -1.61
CLDN1-202ENST00000490800 KRTAP26-1Q6PEX3 210 aa5.01□□□□□ -1.61
CLDN1-202ENST00000490800 C2orf91Q6ZV80 131 aa5.01□□□□□ -1.61
CLDN1-202ENST00000490800 LINC01561Q8N1V8 128 aa5.01□□□□□ -1.61
CLDN1-202ENST00000490800 MYMXA0A1B0GTQ4 84 aa5□□□□□ -1.61
CLDN1-202ENST00000490800 ZNF815PA8K554 130 aa5□□□□□ -1.61
CLDN1-202ENST00000490800 LINC00587B1AMM8 73 aa5□□□□□ -1.61
CLDN1-202ENST00000490800 IBA57-AS1B1ANH7 110 aa5□□□□□ -1.61
CLDN1-202ENST00000490800 LGALS3P17931 250 aaKnown RBP5□□□□□ -1.61
CLDN1-202ENST00000490800 HNRNPA3P51991 378 aaKnown RBP5□□□□□ -1.61
CLDN1-202ENST00000490800 A0A087WTM6 91 aa4.99□□□□□ -1.61
CLDN1-202ENST00000490800 COX7A2LO14548 114 aa4.99□□□□□ -1.61
CLDN1-202ENST00000490800 XGP55808 180 aa4.99□□□□□ -1.61
CLDN1-202ENST00000490800 CTAG1AP78358 180 aa4.99□□□□□ -1.61
CLDN1-202ENST00000490800 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
CLDN1-202ENST00000490800 C10orf126Q8N4M7 172 aa4.99□□□□□ -1.61
CLDN1-202ENST00000490800 K7EP13 123 aa4.98□□□□□ -1.61
CLDN1-202ENST00000490800 KRTAP10-1P60331 282 aa4.98□□□□□ -1.61
CLDN1-202ENST00000490800 COX7B2Q8TF08 81 aa4.98□□□□□ -1.61
CLDN1-202ENST00000490800 Q9HAA7 133 aa4.98□□□□□ -1.61
CLDN1-202ENST00000490800 HIGD1BQ9P298 99 aa4.98□□□□□ -1.61
CLDN1-202ENST00000490800 NDUFA12Q9UI09 145 aa4.98□□□□□ -1.61
CLDN1-202ENST00000490800 IGKV2D-24A0A075B6R9 120 aa4.97□□□□□ -1.61
CLDN1-202ENST00000490800 NDUFA1O15239 70 aa4.97□□□□□ -1.61
CLDN1-202ENST00000490800 ORAOV1Q8WV07 137 aa4.97□□□□□ -1.61
CLDN1-202ENST00000490800 ZNF625Q96I27 306 aaPredicted RBP4.97□□□□□ -1.61
CLDN1-202ENST00000490800 TOMM7Q9P0U1 55 aa4.97□□□□□ -1.61
CLDN1-202ENST00000490800 A0A0A0MQY5 61 aa4.96□□□□□ -1.62
CLDN1-202ENST00000490800 A0A0J9YXY3 114 aa4.96□□□□□ -1.62
CLDN1-202ENST00000490800 EPM2AB3EWF7 344 aa4.96□□□□□ -1.62
CLDN1-202ENST00000490800 KIAA0087Q14695 138 aa4.96□□□□□ -1.62
CLDN1-202ENST00000490800 SCGB1D4Q6XE38 83 aa4.96□□□□□ -1.62
CLDN1-202ENST00000490800 Q8IZM0 81 aa4.96□□□□□ -1.62
CLDN1-202ENST00000490800 COX11Q9Y6N1 276 aa4.96□□□□□ -1.62
CLDN1-202ENST00000490800 HERC1Q15751 4861 aa4.96□□□□□ -1.62
CLDN1-202ENST00000490800 LRCOL1A6NCL2 159 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms