RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 LY6G6CO95867 125 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 CRYGDP07320 174 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 P0DMU3 169 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 FAM231AP0DMU4 169 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 FAM231CP0DMU5 169 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 LINC00315P59091 139 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 UBE2D3P61077 147 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 UBE2D2P62837 147 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 SMAGPQ0VAQ4 97 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 DAZ2Q13117 558 aaKnown RBP3.29□□□□□ -1.88
CSTF1-205ENST00000490539 SRSF9Q13242 221 aaKnown RBP eCLIP3.29□□□□□ -1.88
CSTF1-205ENST00000490539 PMVKQ15126 192 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 RHOHQ15669 191 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 UBE2DNLQ8IWF7 75 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 C15orf53Q8NAA6 179 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 KIR2DL4Q99706 377 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 LINC00467Q9BRT7 94 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 NOP10Q9NPE3 64 aaKnown RBP3.29□□□□□ -1.88
CSTF1-205ENST00000490539 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 KMT2AQ03164 3969 aa3.29□□□□□ -1.88
CSTF1-205ENST00000490539 HSPG2P98160 4391 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 TRGV1A0A0A0MS02 117 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 A0A0J9YY99 117 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 TRBV27A0A0K0K1C4 114 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 LEPROTO15243 131 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 GNRH2O43555 120 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 TSHBP01222 138 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 IGHV3-30P01768 117 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 IGHV3-30-5P0DP03 117 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 ZFP2Q6ZN57 461 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 MTURNQ8N3F0 131 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 SLC25A29Q8N8R3 303 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 PPDPFLQ8WWR9 84 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 PLEKHB2Q96CS7 222 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 LITAFQ99732 161 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 HMCN2Q8NDA2 5059 aa3.28□□□□□ -1.88
CSTF1-205ENST00000490539 LOC107984156A0A0G2JMH3 177 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 J3QQQ9 107 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 LGALS3P17931 250 aaKnown RBP3.27□□□□□ -1.89
CSTF1-205ENST00000490539 PSMB2P49721 201 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 CRYBA4P53673 196 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 CCL18P55774 89 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 TEN1Q86WV5 123 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 ARL17AQ8IVW1 177 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 C10orf126Q8N4M7 172 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 C9orf85Q96MD7 179 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 AMELXQ99217 191 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 CELA1Q9UNI1 258 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 DNAH11Q96DT5 4516 aa3.27□□□□□ -1.89
CSTF1-205ENST00000490539 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.26□□□□□ -1.89
CSTF1-205ENST00000490539 A0A0B4J2C4 111 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 TRGV4A0A0C4DH28 118 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 IGHV3-16A0A0C4DH30 117 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 A0A0U1RRA0 63 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 TMEM223A0PJW6 202 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 SDHAF1A6NFY7 115 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 A8MWV9 139 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 TMEM262E9PQX1 116 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 M0R2P5 195 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 TCL1BO95988 128 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 TSPEAR-AS2P59090 65 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 CKS1BP61024 79 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 RPL39P62891 51 aaKnown RBP3.26□□□□□ -1.89
CSTF1-205ENST00000490539 HERV-K104P63124 156 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 TMEM170BQ5T4T1 132 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 ZNRF2Q8NHG8 242 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 CARD19Q96LW7 228 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 LINC01600Q96MT4 127 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 PRO1854Q9UHT4 67 aa3.26□□□□□ -1.89
CSTF1-205ENST00000490539 TRAV26-1A0A087WT03 109 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 H3BNG1 76 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 M0QY20 66 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 IGHV3-33P01772 117 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 SPINK8P0C7L1 97 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 ZNF22P17026 224 aaPredicted RBP3.25□□□□□ -1.89
CSTF1-205ENST00000490539 ZNF56Q15929 161 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 Q6ZTI0 123 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 Q6ZUT4 128 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 C20orf203Q8NBC4 194 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 JPT2Q9H910 190 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 PRO0255Q9UI72 69 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 PYGO1Q9Y3Y4 419 aa3.25□□□□□ -1.89
CSTF1-205ENST00000490539 IGLV4-3A0A075B6K6 122 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 TRAV4A0A0B4J268 109 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 PLAC8L1A1L4L8 177 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 I3L3M4 83 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 MT-ATP8P03928 68 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 PRM2P04554 102 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 SCGB1C2P0DMR2 95 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 MRPL23Q16540 153 aaKnown RBP3.24□□□□□ -1.89
CSTF1-205ENST00000490539 ANKRD29Q8N6D5 301 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 C11orf72Q8NBR9 251 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 GEMIN7Q9H840 131 aaKnown RBP3.24□□□□□ -1.89
CSTF1-205ENST00000490539 ERG28Q9UKR5 140 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 APLNQ9ULZ1 77 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 ICOSQ9Y6W8 199 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 PKHD1P08F94 4074 aa3.24□□□□□ -1.89
CSTF1-205ENST00000490539 ALMS1Q8TCU4 4167 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 MYCBP2O75592 4640 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms