RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 IGKV3D-20A0A0C4DH25 116 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 IBA57-AS1B1ANH7 110 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 TMEM256-PLSCR3K7ERE1 68 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 ZNF861PO60384 105 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 IGKV1-17P01599 117 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 CD28P10747 220 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 SORL1Q92673 2214 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 ZFHX4Q86UP3 3567 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 CEP250Q9BV73 2442 aa1.77□□□□□ -2.13
UBXN4-208ENST00000490163 H0YGX0 51 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 BUB1B-PAK6H3BSN5 160 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 VMO1Q7Z5L0 202 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 GPHB5Q86YW7 130 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 DEFB104AQ8WTQ1 72 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 DOPEY2Q9Y3R5 2298 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 MYO15AQ9UKN7 3530 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 MUC3AQ02505 3323 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 ICE1Q9Y2F5 2266 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 IGKV1D-17A0A075B6S4 117 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 CYSRT1A8MQ03 144 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 JMJD7-PLA2G4BH0Y9G9 81 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 ZNF73O43830 326 aaPredicted RBP1.76□□□□□ -2.13
UBXN4-208ENST00000490163 RNASE4P34096 147 aaKnown RBP1.76□□□□□ -2.13
UBXN4-208ENST00000490163 HAMPP81172 84 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 ZNF833PQ6ZTB9 187 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 LINC00612Q8N6U2 182 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 LINC00308Q8TCZ7 52 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 ANAPC11Q9NYG5 84 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 NCR3O14931 201 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 LECT2O14960 151 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 KRTAP5-9P26371 169 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 Q8N2B8 174 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 DEFB108BQ8NET1 73 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 SPTSSBQ8NFR3 76 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 ORMDL1Q9P0S3 153 aa1.76□□□□□ -2.13
UBXN4-208ENST00000490163 UBE2AP49459 152 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 NREPQ16612 68 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 FAM229BQ4G0N7 80 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 Q8N6K4 173 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 Q8NAQ8 132 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 TMEM254Q8TBM7 123 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 ZNF292O60281 2723 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 SDK1Q7Z5N4 2213 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 IGHV1-18A0A0C4DH31 117 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 C16orf90A8MZG2 172 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 I3L2K1 104 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 M0R378 163 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 MIR7-3HGQ8N6C7 128 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 BDP1A6H8Y1 2624 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 IGHV3OR16-8A0A075B7F1 116 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 E7EQL1 145 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 NDUFA1O15239 70 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 POLR2KP53803 58 aaKnown RBP1.75□□□□□ -2.13
UBXN4-208ENST00000490163 FAM74A4Q5TZK3 123 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 TTTY12Q9BZ98 90 aa1.75□□□□□ -2.13
UBXN4-208ENST00000490163 RP1L1Q8IWN7 2480 aaPredicted RBP1.74□□□□□ -2.13
UBXN4-208ENST00000490163 OTOGLQ3ZCN5 2332 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 K7EIM0 57 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 KRTAP10-12P60413 245 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 PHF5AQ7RTV0 110 aaKnown RBP1.74□□□□□ -2.13
UBXN4-208ENST00000490163 C22orf24Q9Y442 160 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 ABCA4P78363 2273 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 TRAV10A0A0B4J240 114 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 TRBV6-5A0A0K0K1A5 114 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 ERC2-IT1O76042 136 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 Q1T7F1 81 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 LCA10Q71F78 164 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 FDCSPQ8NFU4 85 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 LENEPQ9Y5L5 61 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 WDR87Q6ZQQ6 2873 aa1.74□□□□□ -2.13
UBXN4-208ENST00000490163 LRCOL1A6NCL2 159 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 CHKB-CPT1BH3BT56 60 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 VCANP13611 3396 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 C7orf65Q6ZTY9 151 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 LINC00269Q8N2A0 174 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 OBSCN-AS1Q96MR7 158 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 CCL3L1P16619 93 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 CMC4P56277 68 aaPredicted RBP1.73□□□□□ -2.13
UBXN4-208ENST00000490163 PRB3Q04118 309 aaPredicted RBP1.73□□□□□ -2.13
UBXN4-208ENST00000490163 SPINK14Q6IE38 97 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 ADM2Q7Z4H4 148 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 CACNA1GO43497 2377 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 TRAV22A0A0B4J277 110 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 TRBV7-4A0A0J9YYF1 115 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 TRBV10-1A0A0K0K1A3 114 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 hDV103S1A0JD37 113 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 PRB1P04280 392 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 GAFA1Q96PS6 74 aa1.73□□□□□ -2.13
UBXN4-208ENST00000490163 DNAH14Q0VDD8 3507 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 TRIOO75962 3097 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 ATP11AUNQ6ZP68 121 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 SMIM11BQ8TCY0 68 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 SMAD5-AS1Q9Y6J3 95 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 CEP290O15078 2479 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 IGKV2-29A2NJV5 120 aaPredicted RBP1.72□□□□□ -2.13
UBXN4-208ENST00000490163 A8MWP4 228 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 XAGE1AQ9HD64 81 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 CDKN2A-AS1Q9UH64 79 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms