RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 DOPEY1Q5JWR5 2465 aa6.36□□□□□ -1.39
LSAMP-205ENST00000490035 A0A0J9YWU9 116 aa6.35□□□□□ -1.39
LSAMP-205ENST00000490035 FHL2Q14192 279 aa6.35□□□□□ -1.39
LSAMP-205ENST00000490035 IGLV2-18A0A075B6J9 118 aa6.35□□□□□ -1.39
LSAMP-205ENST00000490035 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
LSAMP-205ENST00000490035 LOC100131303A0A0U1RQF7 123 aa6.34□□□□□ -1.39
LSAMP-205ENST00000490035 FAM30AQ9NZY2 134 aa6.34□□□□□ -1.39
LSAMP-205ENST00000490035 IGLV9-49A0A0B4J1Y8 123 aa6.34□□□□□ -1.39
LSAMP-205ENST00000490035 ESRGQ1W209 222 aa6.34□□□□□ -1.4
LSAMP-205ENST00000490035 PLA2G2AP14555 144 aa6.34□□□□□ -1.4
LSAMP-205ENST00000490035 ANKRD17O75179 2603 aaKnown RBP6.33□□□□□ -1.4
LSAMP-205ENST00000490035 CCDC179H3BU77 68 aa6.33□□□□□ -1.4
LSAMP-205ENST00000490035 A8MZ25 164 aa6.33□□□□□ -1.4
LSAMP-205ENST00000490035 UNQ6190/PRO20217Q6UXQ8 127 aa6.33□□□□□ -1.4
LSAMP-205ENST00000490035 H3BNG1 76 aa6.33□□□□□ -1.4
LSAMP-205ENST00000490035 C10orf99Q6UWK7 81 aa6.33□□□□□ -1.4
LSAMP-205ENST00000490035 TRBV7-7A0A0K0K1E9 115 aa6.32□□□□□ -1.4
LSAMP-205ENST00000490035 LINC00575Q6W349 94 aa6.32□□□□□ -1.4
LSAMP-205ENST00000490035 Q8N3U1 123 aa6.32□□□□□ -1.4
LSAMP-205ENST00000490035 H3BPC8 53 aa6.32□□□□□ -1.4
LSAMP-205ENST00000490035 NANOS2P60321 138 aaKnown RBP6.32□□□□□ -1.4
LSAMP-205ENST00000490035 LINC00208Q96KT6 92 aa6.32□□□□□ -1.4
LSAMP-205ENST00000490035 ABCA12Q86UK0 2595 aa6.31□□□□□ -1.4
LSAMP-205ENST00000490035 URB1-AS1Q96HZ7 61 aa6.31□□□□□ -1.4
LSAMP-205ENST00000490035 IGLV5-52A0A0A0MRZ9 124 aa6.31□□□□□ -1.4
LSAMP-205ENST00000490035 HCG22E2RYF7 251 aa6.31□□□□□ -1.4
LSAMP-205ENST00000490035 LINC00694P0DN24 101 aa6.31□□□□□ -1.4
LSAMP-205ENST00000490035 COX6A2Q02221 97 aa6.31□□□□□ -1.4
LSAMP-205ENST00000490035 CELA1Q9UNI1 258 aa6.31□□□□□ -1.4
LSAMP-205ENST00000490035 A0A0U1RQV1 116 aa6.31□□□□□ -1.4
LSAMP-205ENST00000490035 PPDPFQ9H3Y8 114 aa6.31□□□□□ -1.4
LSAMP-205ENST00000490035 Q9BRP9 147 aa6.31□□□□□ -1.4
LSAMP-205ENST00000490035 LINC00310P59036 64 aa6.3□□□□□ -1.4
LSAMP-205ENST00000490035 LINC01547P58512 204 aaPredicted RBP6.3□□□□□ -1.4
LSAMP-205ENST00000490035 FSHBP01225 129 aa6.3□□□□□ -1.4
LSAMP-205ENST00000490035 H0Y9P7 68 aa6.3□□□□□ -1.4
LSAMP-205ENST00000490035 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
LSAMP-205ENST00000490035 C18orf65Q6ZTR6 163 aa6.29□□□□□ -1.4
LSAMP-205ENST00000490035 TLN2Q9Y4G6 2542 aa6.29□□□□□ -1.4
LSAMP-205ENST00000490035 A0A087WYN8 130 aa6.29□□□□□ -1.4
LSAMP-205ENST00000490035 LY6G6CO95867 125 aa6.29□□□□□ -1.4
LSAMP-205ENST00000490035 C6orf223Q8N319 242 aa6.29□□□□□ -1.4
LSAMP-205ENST00000490035 CIRBP-AS1Q8TBR5 109 aa6.28□□□□□ -1.4
LSAMP-205ENST00000490035 IGLV5-39A0A0G2JS06 123 aa6.28□□□□□ -1.4
LSAMP-205ENST00000490035 IGF2RP11717 2491 aa6.28□□□□□ -1.4
LSAMP-205ENST00000490035 GAS8-AS1O95177 125 aa6.28□□□□□ -1.4
LSAMP-205ENST00000490035 RPS28P62857 69 aaKnown RBP6.28□□□□□ -1.4
LSAMP-205ENST00000490035 LYPD5Q6UWN5 251 aa6.28□□□□□ -1.4
LSAMP-205ENST00000490035 IGLV4-60A0A075B6I1 120 aa6.27□□□□□ -1.41
LSAMP-205ENST00000490035 HRCT1Q6UXD1 115 aa6.27□□□□□ -1.41
LSAMP-205ENST00000490035 ADAMTSL4-AS1Q5T5F5 129 aa6.27□□□□□ -1.41
LSAMP-205ENST00000490035 TMEM254Q8TBM7 123 aa6.27□□□□□ -1.41
LSAMP-205ENST00000490035 F8P00451 2351 aa6.27□□□□□ -1.41
LSAMP-205ENST00000490035 LINC01556Q5JQF7 62 aa6.26□□□□□ -1.41
LSAMP-205ENST00000490035 IGLV5-45A0A087WSX0 123 aa6.26□□□□□ -1.41
LSAMP-205ENST00000490035 TSPEAR-AS2P59090 65 aa6.26□□□□□ -1.41
LSAMP-205ENST00000490035 COL4A2P08572 1712 aa6.26□□□□□ -1.41
LSAMP-205ENST00000490035 FAM19A4Q96LR4 140 aa6.25□□□□□ -1.41
LSAMP-205ENST00000490035 A0A096LNJ9 63 aa6.25□□□□□ -1.41
LSAMP-205ENST00000490035 USP9XQ93008 2570 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-205ENST00000490035 C1orf134Q5TEV5 83 aa6.25□□□□□ -1.41
LSAMP-205ENST00000490035 ANKRD11Q6UB99 2663 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-205ENST00000490035 IGHV6-1A0A0B4J1U7 121 aa6.24□□□□□ -1.41
LSAMP-205ENST00000490035 CRYGAP11844 174 aa6.24□□□□□ -1.41
LSAMP-205ENST00000490035 FHL3Q13643 280 aa6.24□□□□□ -1.41
LSAMP-205ENST00000490035 Q6ZTC4 211 aa6.24□□□□□ -1.41
LSAMP-205ENST00000490035 AVPP01185 164 aa6.24□□□□□ -1.41
LSAMP-205ENST00000490035 KIF25-AS1Q9Y6Z4 181 aa6.24□□□□□ -1.41
LSAMP-205ENST00000490035 ACYP2P14621 99 aa6.24□□□□□ -1.41
LSAMP-205ENST00000490035 M0R2N4 97 aa6.23□□□□□ -1.41
LSAMP-205ENST00000490035 OXLD1Q5BKU9 147 aa6.23□□□□□ -1.41
LSAMP-205ENST00000490035 C9orf116Q5BN46 136 aaPredicted RBP6.23□□□□□ -1.41
LSAMP-205ENST00000490035 LOC110117498A0A087WWA1 95 aa6.22□□□□□ -1.41
LSAMP-205ENST00000490035 IGHV3OR16-9A0A0B4J2B5 98 aa6.22□□□□□ -1.41
LSAMP-205ENST00000490035 A0A087WSZ3 146 aa6.22□□□□□ -1.41
LSAMP-205ENST00000490035 C11orf72Q8NBR9 251 aa6.22□□□□□ -1.41
LSAMP-205ENST00000490035 LINC00337Q8N6G1 96 aa6.21□□□□□ -1.42
LSAMP-205ENST00000490035 LINC00846Q9NV44 126 aa6.21□□□□□ -1.42
LSAMP-205ENST00000490035 PRM2P04554 102 aa6.2□□□□□ -1.42
LSAMP-205ENST00000490035 C1orf64Q8NEQ6 169 aa6.2□□□□□ -1.42
LSAMP-205ENST00000490035 PRO0628Q9UI54 55 aa6.19□□□□□ -1.42
LSAMP-205ENST00000490035 PRR4Q16378 134 aa6.19□□□□□ -1.42
LSAMP-205ENST00000490035 C22orf24Q9Y442 160 aa6.19□□□□□ -1.42
LSAMP-205ENST00000490035 PRR3P79522 188 aaKnown RBP6.19□□□□□ -1.42
LSAMP-205ENST00000490035 Q6ZRU5 148 aa6.19□□□□□ -1.42
LSAMP-205ENST00000490035 KLK9Q2XQG4 91 aa6.18□□□□□ -1.42
LSAMP-205ENST00000490035 ELOF1P60002 83 aaKnown RBP6.18□□□□□ -1.42
LSAMP-205ENST00000490035 GVQW2A0A096LPI5 108 aaPredicted RBP6.18□□□□□ -1.42
LSAMP-205ENST00000490035 NCOR2Q9Y618 2525 aa6.18□□□□□ -1.42
LSAMP-205ENST00000490035 CDSNQ15517 529 aa6.18□□□□□ -1.42
LSAMP-205ENST00000490035 Q6ZSN1 163 aa6.18□□□□□ -1.42
LSAMP-205ENST00000490035 SMCR5Q8TEV8 140 aa6.17□□□□□ -1.42
LSAMP-205ENST00000490035 ERC2-IT1O76042 136 aa6.17□□□□□ -1.42
LSAMP-205ENST00000490035 PKD1L2Q7Z442 2459 aa6.17□□□□□ -1.42
LSAMP-205ENST00000490035 A0A087WVE0 104 aa6.16□□□□□ -1.42
LSAMP-205ENST00000490035 SBSPONQ8IVN8 264 aa6.16□□□□□ -1.42
LSAMP-205ENST00000490035 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
LSAMP-205ENST00000490035 A0A1B0GU69 56 aa6.16□□□□□ -1.42
LSAMP-205ENST00000490035 SPATA3Q8NHX4 192 aa6.16□□□□□ -1.42
LSAMP-205ENST00000490035 JMJD1CQ15652 2540 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms