RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 TP53AIP1Q9HCN2 124 aa0.95□□□□□ -2.26
VPS26A-206ENST00000489794 PLAC8Q9NZF1 115 aa0.95□□□□□ -2.26
VPS26A-206ENST00000489794 C5P01031 1676 aa0.94□□□□□ -2.26
VPS26A-206ENST00000489794 HMGN2P05204 90 aaKnown RBP0.94□□□□□ -2.26
VPS26A-206ENST00000489794 C6orf201Q7Z4U5 140 aa0.94□□□□□ -2.26
VPS26A-206ENST00000489794 NHSL1Q5SYE7 1610 aa0.93□□□□□ -2.26
VPS26A-206ENST00000489794 CRYBG1Q9Y4K1 1723 aa0.93□□□□□ -2.26
VPS26A-206ENST00000489794 A0A1B0GU69 56 aa0.93□□□□□ -2.26
VPS26A-206ENST00000489794 I3L2K1 104 aa0.93□□□□□ -2.26
VPS26A-206ENST00000489794 KRTAP19-3Q7Z4W3 81 aa0.93□□□□□ -2.26
VPS26A-206ENST00000489794 CUX1P39880 1505 aa0.93□□□□□ -2.26
VPS26A-206ENST00000489794 PAPPAQ13219 1627 aa0.93□□□□□ -2.26
VPS26A-206ENST00000489794 F8P00451 2351 aa0.92□□□□□ -2.26
VPS26A-206ENST00000489794 ANKRD36A6QL64 1941 aa0.92□□□□□ -2.26
VPS26A-206ENST00000489794 LINC00959A0A1B0GUT2 108 aa0.92□□□□□ -2.26
VPS26A-206ENST00000489794 RABAC1Q9UI14 185 aa0.92□□□□□ -2.26
VPS26A-206ENST00000489794 NEXMIFQ5QGS0 1516 aa0.92□□□□□ -2.26
VPS26A-206ENST00000489794 MAP3K4Q9Y6R4 1608 aa0.92□□□□□ -2.26
VPS26A-206ENST00000489794 SUPT6HQ7KZ85 1726 aaKnown RBP0.92□□□□□ -2.26
VPS26A-206ENST00000489794 ZFHX3Q15911 3703 aa0.91□□□□□ -2.26
VPS26A-206ENST00000489794 TRBV7-4A0A0J9YYF1 115 aa0.91□□□□□ -2.26
VPS26A-206ENST00000489794 A0A0G2JMZ2 1700 aa0.91□□□□□ -2.26
VPS26A-206ENST00000489794 MAGI2Q86UL8 1455 aa0.91□□□□□ -2.26
VPS26A-206ENST00000489794 ARHGAP35Q9NRY4 1499 aa0.91□□□□□ -2.26
VPS26A-206ENST00000489794 MEGF8Q7Z7M0 2845 aa0.91□□□□□ -2.26
VPS26A-206ENST00000489794 TULP4Q9NRJ4 1543 aa0.9□□□□□ -2.26
VPS26A-206ENST00000489794 FXYD6-FXYD2A0A087WZ82 144 aa0.9□□□□□ -2.27
VPS26A-206ENST00000489794 SNRPFP62306 86 aaKnown RBP0.9□□□□□ -2.27
VPS26A-206ENST00000489794 ALKAL2Q6UX46 152 aa0.9□□□□□ -2.27
VPS26A-206ENST00000489794 SPTBN2O15020 2390 aa0.9□□□□□ -2.27
VPS26A-206ENST00000489794 C2CD3Q4AC94 2353 aa0.9□□□□□ -2.27
VPS26A-206ENST00000489794 POLQO75417 2590 aa0.9□□□□□ -2.27
VPS26A-206ENST00000489794 DOPEY2Q9Y3R5 2298 aa0.89□□□□□ -2.27
VPS26A-206ENST00000489794 IQCF6A8MYZ5 107 aa0.89□□□□□ -2.27
VPS26A-206ENST00000489794 PIGYQ3MUY2 71 aa0.89□□□□□ -2.27
VPS26A-206ENST00000489794 Q8IZM0 81 aa0.89□□□□□ -2.27
VPS26A-206ENST00000489794 UBE2D4Q9Y2X8 147 aa0.89□□□□□ -2.27
VPS26A-206ENST00000489794 ANKRD17O75179 2603 aaKnown RBP0.88□□□□□ -2.27
VPS26A-206ENST00000489794 WFDC2Q14508 124 aa0.88□□□□□ -2.27
VPS26A-206ENST00000489794 NMSQ5H8A3 153 aa0.88□□□□□ -2.27
VPS26A-206ENST00000489794 S100A13Q99584 98 aa0.88□□□□□ -2.27
VPS26A-206ENST00000489794 BIVM-ERCC5R4GMW8 1640 aa0.88□□□□□ -2.27
VPS26A-206ENST00000489794 BDP1A6H8Y1 2624 aa0.87□□□□□ -2.27
VPS26A-206ENST00000489794 TMEM131LA2VDJ0 1609 aa0.87□□□□□ -2.27
VPS26A-206ENST00000489794 LINC00643Q86TS7 51 aa0.87□□□□□ -2.27
VPS26A-206ENST00000489794 URB1O60287 2271 aaKnown RBP0.87□□□□□ -2.27
VPS26A-206ENST00000489794 ABCA12Q86UK0 2595 aa0.87□□□□□ -2.27
VPS26A-206ENST00000489794 SAMD9Q5K651 1589 aa0.87□□□□□ -2.27
VPS26A-206ENST00000489794 DIP2BQ9P265 1576 aa0.87□□□□□ -2.27
VPS26A-206ENST00000489794 PKD1L3Q7Z443 1732 aa0.86□□□□□ -2.27
VPS26A-206ENST00000489794 CACNA1EQ15878 2313 aa0.86□□□□□ -2.27
VPS26A-206ENST00000489794 MYMXA0A1B0GTQ4 84 aa0.86□□□□□ -2.27
VPS26A-206ENST00000489794 IGLC2P0DOY2 106 aa0.86□□□□□ -2.27
VPS26A-206ENST00000489794 IGLC3P0DOY3 106 aa0.86□□□□□ -2.27
VPS26A-206ENST00000489794 SETBP1Q9Y6X0 1596 aa0.86□□□□□ -2.27
VPS26A-206ENST00000489794 ALKQ9UM73 1620 aa0.86□□□□□ -2.27
VPS26A-206ENST00000489794 USF3Q68DE3 2245 aa0.85□□□□□ -2.27
VPS26A-206ENST00000489794 PLGLAQ15195 96 aa0.85□□□□□ -2.27
VPS26A-206ENST00000489794 ERVK-7P63135 1459 aa0.85□□□□□ -2.27
VPS26A-206ENST00000489794 KANTRA0A1W2PQU2 76 aa0.84□□□□□ -2.27
VPS26A-206ENST00000489794 ADIRFQ15847 76 aa0.84□□□□□ -2.27
VPS26A-206ENST00000489794 SPINK6Q6UWN8 80 aa0.84□□□□□ -2.27
VPS26A-206ENST00000489794 ST20Q9HBF5 79 aa0.84□□□□□ -2.27
VPS26A-206ENST00000489794 KIAA0556O60303 1618 aa0.84□□□□□ -2.28
VPS26A-206ENST00000489794 KIF20BQ96Q89 1820 aa0.84□□□□□ -2.28
VPS26A-206ENST00000489794 SLIT1O75093 1534 aa0.84□□□□□ -2.28
VPS26A-206ENST00000489794 DCAF1Q9Y4B6 1507 aa0.84□□□□□ -2.28
VPS26A-206ENST00000489794 PIEZO1Q92508 2521 aa0.83□□□□□ -2.28
VPS26A-206ENST00000489794 ACYP1P07311 99 aa0.83□□□□□ -2.28
VPS26A-206ENST00000489794 DEFB123Q8N688 67 aa0.83□□□□□ -2.28
VPS26A-206ENST00000489794 TPRP12270 2363 aaKnown RBP0.83□□□□□ -2.28
VPS26A-206ENST00000489794 ATP7BP35670 1465 aa0.82□□□□□ -2.28
VPS26A-206ENST00000489794 PRH1P02810 166 aa0.82□□□□□ -2.28
VPS26A-206ENST00000489794 KRTAP2-3P0C7H8 128 aa0.82□□□□□ -2.28
VPS26A-206ENST00000489794 KRTAP2-4Q9BYR9 128 aa0.82□□□□□ -2.28
VPS26A-206ENST00000489794 KRTAP2-1Q9BYU5 128 aa0.82□□□□□ -2.28
VPS26A-206ENST00000489794 DEFB112Q30KQ8 113 aa0.81□□□□□ -2.28
VPS26A-206ENST00000489794 A0A1B0GUT8 65 aa0.8□□□□□ -2.28
VPS26A-206ENST00000489794 CEBPZOSA8MTT3 80 aa0.8□□□□□ -2.28
VPS26A-206ENST00000489794 K7EQZ3 153 aa0.8□□□□□ -2.28
VPS26A-206ENST00000489794 LRRC37AA6NMS7 1700 aa0.8□□□□□ -2.28
VPS26A-206ENST00000489794 RGPD1P0DJD0 1748 aa0.79□□□□□ -2.28
VPS26A-206ENST00000489794 TNCP24821 2201 aa0.79□□□□□ -2.28
VPS26A-206ENST00000489794 SMR3AQ99954 134 aa0.79□□□□□ -2.28
VPS26A-206ENST00000489794 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.79□□□□□ -2.28
VPS26A-206ENST00000489794 LRRC7Q96NW7 1537 aa0.79□□□□□ -2.28
VPS26A-206ENST00000489794 RGPD2P0DJD1 1756 aa0.78□□□□□ -2.28
VPS26A-206ENST00000489794 COX6B1P14854 86 aa0.78□□□□□ -2.28
VPS26A-206ENST00000489794 CCDC141Q6ZP82 1450 aa0.78□□□□□ -2.28
VPS26A-206ENST00000489794 LRRC9Q6ZRR7 1453 aa0.78□□□□□ -2.28
VPS26A-206ENST00000489794 KDM5DQ9BY66 1539 aa0.78□□□□□ -2.28
VPS26A-206ENST00000489794 APCP25054 2843 aa0.78□□□□□ -2.29
VPS26A-206ENST00000489794 FRAS1Q86XX4 4008 aa0.77□□□□□ -2.29
VPS26A-206ENST00000489794 H3BUT2 72 aa0.77□□□□□ -2.29
VPS26A-206ENST00000489794 USMG5Q96IX5 58 aa0.77□□□□□ -2.29
VPS26A-206ENST00000489794 TSC2P49815 1807 aa0.77□□□□□ -2.29
VPS26A-206ENST00000489794 PTPRZ1P23471 2315 aaPredicted RBP0.77□□□□□ -2.29
VPS26A-206ENST00000489794 SPTBN1Q01082 2364 aaKnown RBP0.76□□□□□ -2.29
VPS26A-206ENST00000489794 PTPRQQ9UMZ3 2332 aa0.76□□□□□ -2.29
VPS26A-206ENST00000489794 COL14A1Q05707 1796 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms