RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 PRO1854Q9UHT4 67 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 NACAE9PAV3 2078 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 TRAV10A0A0B4J240 114 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 IGHV3OR16-9A0A0B4J2B5 98 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 LINC00959A0A1B0GUT2 108 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 IBA57-AS1B1ANH7 110 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 H3BUT2 72 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 K7EP34 96 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 COX7A2LO14548 114 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 CRPP02741 224 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 SPINK8P0C7L1 97 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 COX17Q14061 63 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 MEIG1Q5JSS6 88 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 C10orf126Q8N4M7 172 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 TTTY13Q9BZ97 58 aa4.41□□□□□ -1.7
SF3A3-208ENST00000489537 TRAV8-3A0A0A6YYJ7 113 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 IGLL5B9A064 214 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 F8W1H4 67 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 ANGP03950 147 aaKnown RBP4.4□□□□□ -1.71
SF3A3-208ENST00000489537 HTN3P15516 51 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 MALP21145 153 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 TSPEAR-AS2P59090 65 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 RNASE13Q5GAN3 156 aaKnown RBP4.4□□□□□ -1.71
SF3A3-208ENST00000489537 C6orf226Q5I0X4 101 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 CFAP161Q6P656 301 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 Q8IZM0 81 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 TM2D3Q9BRN9 247 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 Q9H8V8 135 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 ERG28Q9UKR5 140 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 SPCS1Q9Y6A9 102 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 DNAH7Q8WXX0 4024 aa4.4□□□□□ -1.71
SF3A3-208ENST00000489537 IGHV3-64A0A075B6Q5 118 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 DEFB131BA0A096LNP1 70 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 A0A096LPF7 62 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 J3QR89 54 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 K7EIL1 84 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 DEFB4AO15263 64 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 CKS1BP61024 79 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 REG3AQ06141 175 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 LYPD5Q6UWN5 251 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 RMI2Q96E14 147 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 ZNF625Q96I27 306 aaPredicted RBP4.39□□□□□ -1.71
SF3A3-208ENST00000489537 CELA1Q9UNI1 258 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 KLK5Q9Y337 293 aaPredicted RBP4.39□□□□□ -1.71
SF3A3-208ENST00000489537 CBY1Q9Y3M2 126 aa4.39□□□□□ -1.71
SF3A3-208ENST00000489537 IGLV4-60A0A075B6I1 120 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 TRAV13-2A0A0B4J235 113 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 A4D1N5 150 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 NHLRC4P0CG21 123 aaPredicted RBP4.38□□□□□ -1.71
SF3A3-208ENST00000489537 CFC1BP0CG36 223 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 CFC1P0CG37 223 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 SCGB1C2P0DMR2 95 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 COX6A2Q02221 97 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 DEFB121Q5J5C9 76 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 MUSTN1Q8IVN3 82 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 LINC00269Q8N2A0 174 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 PRR34Q9NV39 138 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 STARD9Q9P2P6 4700 aa4.38□□□□□ -1.71
SF3A3-208ENST00000489537 HYDINQ4G0P3 5121 aa4.37□□□□□ -1.71
SF3A3-208ENST00000489537 A0A0J9YWU9 116 aa4.37□□□□□ -1.71
SF3A3-208ENST00000489537 TRBV30A0A0K0K1B3 111 aa4.37□□□□□ -1.71
SF3A3-208ENST00000489537 K7ERU9 68 aa4.37□□□□□ -1.71
SF3A3-208ENST00000489537 SNCGO76070 127 aa4.37□□□□□ -1.71
SF3A3-208ENST00000489537 PSMB2P49721 201 aa4.37□□□□□ -1.71
SF3A3-208ENST00000489537 CCL18P55774 89 aa4.37□□□□□ -1.71
SF3A3-208ENST00000489537 Q1RN00 199 aa4.37□□□□□ -1.71
SF3A3-208ENST00000489537 Q8N1X5 172 aa4.37□□□□□ -1.71
SF3A3-208ENST00000489537 CHCHD10Q8WYQ3 142 aaPredicted RBP4.37□□□□□ -1.71
SF3A3-208ENST00000489537 LITAFQ99732 161 aa4.37□□□□□ -1.71
SF3A3-208ENST00000489537 EPPK1P58107 5090 aaKnown RBP4.37□□□□□ -1.71
SF3A3-208ENST00000489537 IGKV3OR2-268A0A0C4DH90 116 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 LOC107984156A0A0G2JMH3 177 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 SLPIP03973 132 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 XCL1P47992 114 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 LINC01556Q5JQF7 62 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 Q6ZTC4 211 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 ARL17AQ8IVW1 177 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 MRAPQ8TCY5 172 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 LINC00308Q8TCZ7 52 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 CDIP1Q9H305 208 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 TOMM7Q9P0U1 55 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 DNAH1Q9P2D7 4330 aa4.36□□□□□ -1.71
SF3A3-208ENST00000489537 M0QXV9 152 aa4.35□□□□□ -1.71
SF3A3-208ENST00000489537 IGHV3-33P01772 117 aa4.35□□□□□ -1.71
SF3A3-208ENST00000489537 LINC00158P58513 81 aa4.35□□□□□ -1.71
SF3A3-208ENST00000489537 PLECQ15149 4684 aaKnown RBP4.35□□□□□ -1.71
SF3A3-208ENST00000489537 ATXN8Q156A1 80 aa4.35□□□□□ -1.71
SF3A3-208ENST00000489537 C5orf38Q86SI9 138 aa4.35□□□□□ -1.71
SF3A3-208ENST00000489537 TENM3Q9P273 2699 aa4.34□□□□□ -1.71
SF3A3-208ENST00000489537 GVQW2A0A096LPI5 108 aaPredicted RBP4.34□□□□□ -1.71
SF3A3-208ENST00000489537 K7ERJ3 54 aa4.34□□□□□ -1.71
SF3A3-208ENST00000489537 NDUFC2O95298 119 aa4.34□□□□□ -1.71
SF3A3-208ENST00000489537 TSPAN13O95857 204 aa4.34□□□□□ -1.71
SF3A3-208ENST00000489537 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.71
SF3A3-208ENST00000489537 CARD19Q96LW7 228 aa4.34□□□□□ -1.71
SF3A3-208ENST00000489537 WWC2-AS2Q96NR7 200 aa4.34□□□□□ -1.71
SF3A3-208ENST00000489537 B9D2Q9BPU9 175 aa4.34□□□□□ -1.71
SF3A3-208ENST00000489537 C1orf43Q9BWL3 253 aa4.34□□□□□ -1.71
SF3A3-208ENST00000489537 KLK12Q9UKR0 248 aa4.34□□□□□ -1.71
SF3A3-208ENST00000489537 PKIGQ9Y2B9 76 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms