RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ARMS2P0C7Q2 107 aa0.37□□□□□ -2.35
XRN1-213ENST00000489241 ZNF720Q7Z2F6 126 aa0.37□□□□□ -2.35
XRN1-213ENST00000489241 PKDREJQ9NTG1 2253 aa0.37□□□□□ -2.35
XRN1-213ENST00000489241 CLTCQ00610 1675 aaKnown RBP0.37□□□□□ -2.35
XRN1-213ENST00000489241 URB1O60287 2271 aaKnown RBP0.36□□□□□ -2.35
XRN1-213ENST00000489241 TSC2P49815 1807 aa0.36□□□□□ -2.35
XRN1-213ENST00000489241 XRN1Q8IZH2 1706 aaKnown RBP0.36□□□□□ -2.35
XRN1-213ENST00000489241 TRBV7-7A0A0K0K1E9 115 aa0.36□□□□□ -2.35
XRN1-213ENST00000489241 A0A1B0GU69 56 aa0.36□□□□□ -2.35
XRN1-213ENST00000489241 LRP1Q07954 4544 aaKnown RBP0.36□□□□□ -2.35
XRN1-213ENST00000489241 RAPGEF2Q9Y4G8 1499 aa0.35□□□□□ -2.35
XRN1-213ENST00000489241 ZFHX3Q15911 3703 aa0.35□□□□□ -2.35
XRN1-213ENST00000489241 LEPROTL1O95214 131 aa0.35□□□□□ -2.35
XRN1-213ENST00000489241 DEFB109BQ30KR1 87 aa0.35□□□□□ -2.35
XRN1-213ENST00000489241 ETDBQ3ZM63 59 aa0.35□□□□□ -2.35
XRN1-213ENST00000489241 BAZ1AQ9NRL2 1556 aaPredicted RBP0.35□□□□□ -2.35
XRN1-213ENST00000489241 PAPPA2Q9BXP8 1791 aa0.34□□□□□ -2.35
XRN1-213ENST00000489241 PPRC1Q5VV67 1664 aaKnown RBP0.34□□□□□ -2.35
XRN1-213ENST00000489241 A0A0G2JMZ2 1700 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 D6R8Y8 96 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 F8WEM9 126 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 H0Y9P7 68 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 GYPAP02724 150 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 COX6B1P14854 86 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 SPRR1AP35321 89 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 Q5VSD8 79 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 MON2Q7Z3U7 1717 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 C6orf201Q7Z4U5 140 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 MUSTN1Q8IVN3 82 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 SETBP1Q9Y6X0 1596 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 RGPD4Q7Z3J3 1758 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 NRXN1Q9ULB1 1477 aa0.34□□□□□ -2.36
XRN1-213ENST00000489241 AKAP6Q13023 2319 aa0.33□□□□□ -2.36
XRN1-213ENST00000489241 KMT2DO14686 5537 aa0.33□□□□□ -2.36
XRN1-213ENST00000489241 DEFB123Q8N688 67 aa0.33□□□□□ -2.36
XRN1-213ENST00000489241 PSENENQ9NZ42 101 aa0.33□□□□□ -2.36
XRN1-213ENST00000489241 HIGD1BQ9P298 99 aa0.33□□□□□ -2.36
XRN1-213ENST00000489241 ABCC2Q92887 1545 aa0.33□□□□□ -2.36
XRN1-213ENST00000489241 TULP4Q9NRJ4 1543 aa0.33□□□□□ -2.36
XRN1-213ENST00000489241 RGPD3A6NKT7 1758 aaPredicted RBP0.32□□□□□ -2.36
XRN1-213ENST00000489241 SMIM11AP58511 58 aa0.32□□□□□ -2.36
XRN1-213ENST00000489241 HMGN3Q15651 99 aa0.32□□□□□ -2.36
XRN1-213ENST00000489241 C20orf78Q9BR46 151 aa0.32□□□□□ -2.36
XRN1-213ENST00000489241 FXYD6Q9H0Q3 95 aa0.32□□□□□ -2.36
XRN1-213ENST00000489241 V9GYS6 101 aa0.32□□□□□ -2.36
XRN1-213ENST00000489241 UNC79Q9P2D8 2635 aa0.32□□□□□ -2.36
XRN1-213ENST00000489241 KIF20BQ96Q89 1820 aa0.31□□□□□ -2.36
XRN1-213ENST00000489241 SHPRHQ149N8 1683 aa0.31□□□□□ -2.36
XRN1-213ENST00000489241 SPTBN1Q01082 2364 aaKnown RBP0.31□□□□□ -2.36
XRN1-213ENST00000489241 K7EQZ3 153 aa0.31□□□□□ -2.36
XRN1-213ENST00000489241 SPRR1BP22528 89 aa0.31□□□□□ -2.36
XRN1-213ENST00000489241 ALKAL2Q6UX46 152 aa0.31□□□□□ -2.36
XRN1-213ENST00000489241 USMG5Q96IX5 58 aa0.31□□□□□ -2.36
XRN1-213ENST00000489241 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
XRN1-213ENST00000489241 TARBP1Q13395 1621 aaKnown RBP0.31□□□□□ -2.36
XRN1-213ENST00000489241 C5P01031 1676 aa0.3□□□□□ -2.36
XRN1-213ENST00000489241 FMN2Q9NZ56 1722 aa0.3□□□□□ -2.36
XRN1-213ENST00000489241 MAST4O15021 2626 aa0.3□□□□□ -2.36
XRN1-213ENST00000489241 PEA15Q15121 130 aa0.3□□□□□ -2.36
XRN1-213ENST00000489241 NCOR1O75376 2440 aa0.3□□□□□ -2.36
XRN1-213ENST00000489241 CRYBG1Q9Y4K1 1723 aa0.3□□□□□ -2.36
XRN1-213ENST00000489241 EDC4Q6P2E9 1401 aaKnown RBP0.3□□□□□ -2.36
XRN1-213ENST00000489241 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
XRN1-213ENST00000489241 TTC37Q6PGP7 1564 aa0.29□□□□□ -2.36
XRN1-213ENST00000489241 COX8AP10176 69 aa0.29□□□□□ -2.36
XRN1-213ENST00000489241 ATP10BO94823 1461 aa0.29□□□□□ -2.36
XRN1-213ENST00000489241 SMARCA2P51531 1590 aa0.28□□□□□ -2.36
XRN1-213ENST00000489241 COL14A1Q05707 1796 aaKnown RBP0.28□□□□□ -2.36
XRN1-213ENST00000489241 PYY3Q5JQD4 70 aa0.28□□□□□ -2.36
XRN1-213ENST00000489241 CRIPTQ9P021 101 aa0.28□□□□□ -2.36
XRN1-213ENST00000489241 EPRSP07814 1512 aaKnown RBP0.28□□□□□ -2.37
XRN1-213ENST00000489241 WNK2Q9Y3S1 2297 aa0.27□□□□□ -2.37
XRN1-213ENST00000489241 CSMD3Q7Z407 3707 aa0.27□□□□□ -2.37
XRN1-213ENST00000489241 ANKRD17O75179 2603 aaKnown RBP0.27□□□□□ -2.37
XRN1-213ENST00000489241 TROQ12816 1431 aaPredicted RBP0.27□□□□□ -2.37
XRN1-213ENST00000489241 FANCAO15360 1455 aa0.27□□□□□ -2.37
XRN1-213ENST00000489241 CCDC141Q6ZP82 1450 aa0.27□□□□□ -2.37
XRN1-213ENST00000489241 KIAA0556O60303 1618 aa0.27□□□□□ -2.37
XRN1-213ENST00000489241 PIEZO2Q9H5I5 2752 aa0.27□□□□□ -2.37
XRN1-213ENST00000489241 KIAA1551Q9HCM1 1747 aa0.27□□□□□ -2.37
XRN1-213ENST00000489241 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
XRN1-213ENST00000489241 UBR5O95071 2799 aaPredicted RBP0.26□□□□□ -2.37
XRN1-213ENST00000489241 PVALEFA0A1B0GWK0 134 aa0.26□□□□□ -2.37
XRN1-213ENST00000489241 CPSF4LA6NMK7 179 aaKnown RBP0.26□□□□□ -2.37
XRN1-213ENST00000489241 I3L3M4 83 aa0.26□□□□□ -2.37
XRN1-213ENST00000489241 HMGN2P05204 90 aaKnown RBP0.26□□□□□ -2.37
XRN1-213ENST00000489241 IGLC2P0DOY2 106 aa0.26□□□□□ -2.37
XRN1-213ENST00000489241 IGLC3P0DOY3 106 aa0.26□□□□□ -2.37
XRN1-213ENST00000489241 GNG2P59768 71 aa0.26□□□□□ -2.37
XRN1-213ENST00000489241 DEFB105AQ8NG35 78 aa0.26□□□□□ -2.37
XRN1-213ENST00000489241 S100A16Q96FQ6 103 aaKnown RBP0.26□□□□□ -2.37
XRN1-213ENST00000489241 APLNQ9ULZ1 77 aa0.26□□□□□ -2.37
XRN1-213ENST00000489241 UBR3Q6ZT12 1888 aa0.26□□□□□ -2.37
XRN1-213ENST00000489241 HIVEP3Q5T1R4 2406 aa0.25□□□□□ -2.37
XRN1-213ENST00000489241 CSPG4Q6UVK1 2322 aa0.25□□□□□ -2.37
XRN1-213ENST00000489241 PKD1L3Q7Z443 1732 aa0.25□□□□□ -2.37
XRN1-213ENST00000489241 UBR1Q8IWV7 1749 aa0.25□□□□□ -2.37
XRN1-213ENST00000489241 CUX1P39880 1505 aa0.25□□□□□ -2.37
XRN1-213ENST00000489241 K7EP34 96 aa0.25□□□□□ -2.37
XRN1-213ENST00000489241 SPINK4O60575 86 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms