RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 UQCR10Q9UDW1 63 aa5.05□□□□□ -1.6
APOBEC3A-203ENST00000488758 IGLV5-39A0A0G2JS06 123 aa5.04□□□□□ -1.6
APOBEC3A-203ENST00000488758 ZNF815PA8K554 130 aa5.04□□□□□ -1.6
APOBEC3A-203ENST00000488758 PSCAO43653 123 aa5.04□□□□□ -1.6
APOBEC3A-203ENST00000488758 KRTAP26-1Q6PEX3 210 aa5.04□□□□□ -1.6
APOBEC3A-203ENST00000488758 PCP2Q8IVA1 136 aa5.04□□□□□ -1.6
APOBEC3A-203ENST00000488758 BOD1L2Q8IYS8 172 aa5.04□□□□□ -1.6
APOBEC3A-203ENST00000488758 MAPKAPK5-AS1Q8N8E1 139 aa5.04□□□□□ -1.6
APOBEC3A-203ENST00000488758 ORAOV1Q8WV07 137 aa5.04□□□□□ -1.6
APOBEC3A-203ENST00000488758 MIEN1Q9BRT3 115 aa5.04□□□□□ -1.6
APOBEC3A-203ENST00000488758 KRTAP1-5Q9BYS1 174 aa5.04□□□□□ -1.6
APOBEC3A-203ENST00000488758 STARD9Q9P2P6 4700 aa5.04□□□□□ -1.6
APOBEC3A-203ENST00000488758 PLECQ15149 4684 aaKnown RBP5.03□□□□□ -1.6
APOBEC3A-203ENST00000488758 DLEU1O43261 78 aa5.03□□□□□ -1.6
APOBEC3A-203ENST00000488758 TSPEAR-AS2P59090 65 aa5.03□□□□□ -1.6
APOBEC3A-203ENST00000488758 CKS1BP61024 79 aa5.03□□□□□ -1.6
APOBEC3A-203ENST00000488758 TTTY13Q9BZ97 58 aa5.03□□□□□ -1.6
APOBEC3A-203ENST00000488758 NDUFA12Q9UI09 145 aa5.03□□□□□ -1.6
APOBEC3A-203ENST00000488758 SACSQ9NZJ4 4579 aa5.02□□□□□ -1.61
APOBEC3A-203ENST00000488758 PCP4L1A6NKN8 68 aa5.02□□□□□ -1.61
APOBEC3A-203ENST00000488758 ZNF561-AS1K7EIQ3 104 aa5.02□□□□□ -1.61
APOBEC3A-203ENST00000488758 HNRNPA3P51991 378 aaKnown RBP5.02□□□□□ -1.61
APOBEC3A-203ENST00000488758 SPAG11BQ08648 103 aa5.02□□□□□ -1.61
APOBEC3A-203ENST00000488758 SFTA2Q6UW10 78 aa5.02□□□□□ -1.61
APOBEC3A-203ENST00000488758 SCGB1D4Q6XE38 83 aa5.02□□□□□ -1.61
APOBEC3A-203ENST00000488758 Q8IZM0 81 aa5.02□□□□□ -1.61
APOBEC3A-203ENST00000488758 PLA2G2DQ9UNK4 145 aa5.02□□□□□ -1.61
APOBEC3A-203ENST00000488758 LCE6AA0A183 80 aa5.01□□□□□ -1.61
APOBEC3A-203ENST00000488758 NDUFA1O15239 70 aa5.01□□□□□ -1.61
APOBEC3A-203ENST00000488758 CXCL5P42830 114 aa5.01□□□□□ -1.61
APOBEC3A-203ENST00000488758 HERV-K104P63124 156 aa5.01□□□□□ -1.61
APOBEC3A-203ENST00000488758 CIRBPQ14011 172 aaKnown RBP5.01□□□□□ -1.61
APOBEC3A-203ENST00000488758 HIGD2BQ4VC39 106 aa5.01□□□□□ -1.61
APOBEC3A-203ENST00000488758 C6orf223Q8N319 242 aa5.01□□□□□ -1.61
APOBEC3A-203ENST00000488758 ZNF625Q96I27 306 aaPredicted RBP5.01□□□□□ -1.61
APOBEC3A-203ENST00000488758 LINC00587B1AMM8 73 aa5□□□□□ -1.61
APOBEC3A-203ENST00000488758 USP17L23D6RBM5 183 aa5□□□□□ -1.61
APOBEC3A-203ENST00000488758 DDTP30046 118 aa5□□□□□ -1.61
APOBEC3A-203ENST00000488758 KIAA0087Q14695 138 aa5□□□□□ -1.61
APOBEC3A-203ENST00000488758 MEIG1Q5JSS6 88 aa5□□□□□ -1.61
APOBEC3A-203ENST00000488758 C1orf134Q5TEV5 83 aa5□□□□□ -1.61
APOBEC3A-203ENST00000488758 Q6ZR54 194 aa5□□□□□ -1.61
APOBEC3A-203ENST00000488758 C15orf56Q8N910 161 aa5□□□□□ -1.61
APOBEC3A-203ENST00000488758 NTN5Q8WTR8 489 aaPredicted RBP5□□□□□ -1.61
APOBEC3A-203ENST00000488758 DNAH1Q9P2D7 4330 aa5□□□□□ -1.61
APOBEC3A-203ENST00000488758 HYDINQ4G0P3 5121 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 GVQW2A0A096LPI5 108 aaPredicted RBP4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 A0A0J9YXY3 114 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 F8WDY8 70 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 LECT2O14960 151 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 C14orf177Q52M58 125 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 C2orf82Q6UX34 121 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 LINC00526Q96FQ7 95 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 C2orf48Q96LS8 159 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 CAMK2N2Q96S95 79 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 LYSTQ99698 3801 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 HIGD1BQ9P298 99 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 TP73-AS1Q9UF72 201 aa4.99□□□□□ -1.61
APOBEC3A-203ENST00000488758 A0A0U1RRA0 63 aa4.98□□□□□ -1.61
APOBEC3A-203ENST00000488758 TIMM17BO60830 172 aa4.98□□□□□ -1.61
APOBEC3A-203ENST00000488758 SRSF9Q13242 221 aaKnown RBP eCLIP4.98□□□□□ -1.61
APOBEC3A-203ENST00000488758 UNQ6190/PRO20217Q6UXQ8 127 aa4.98□□□□□ -1.61
APOBEC3A-203ENST00000488758 Q6ZRN7 208 aaPredicted RBP4.98□□□□□ -1.61
APOBEC3A-203ENST00000488758 C2orf91Q6ZV80 131 aa4.98□□□□□ -1.61
APOBEC3A-203ENST00000488758 VPS13DQ5THJ4 4388 aa4.97□□□□□ -1.61
APOBEC3A-203ENST00000488758 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
APOBEC3A-203ENST00000488758 TMEM238C9JI98 176 aa4.97□□□□□ -1.61
APOBEC3A-203ENST00000488758 PFN2P35080 140 aa4.97□□□□□ -1.61
APOBEC3A-203ENST00000488758 LINC00158P58513 81 aa4.97□□□□□ -1.61
APOBEC3A-203ENST00000488758 CTAG1AP78358 180 aa4.97□□□□□ -1.61
APOBEC3A-203ENST00000488758 SYCNQ0VAF6 134 aa4.97□□□□□ -1.61
APOBEC3A-203ENST00000488758 TAL2Q16559 108 aa4.97□□□□□ -1.61
APOBEC3A-203ENST00000488758 HIST1H4GQ99525 98 aa4.97□□□□□ -1.61
APOBEC3A-203ENST00000488758 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
APOBEC3A-203ENST00000488758 ERG28Q9UKR5 140 aa4.97□□□□□ -1.61
APOBEC3A-203ENST00000488758 TRBV30A0A0K0K1B3 111 aa4.96□□□□□ -1.62
APOBEC3A-203ENST00000488758 PLA2G1BP04054 148 aaKnown RBP4.96□□□□□ -1.62
APOBEC3A-203ENST00000488758 SMIM13P0DJ93 91 aa4.96□□□□□ -1.62
APOBEC3A-203ENST00000488758 HSD52Q0P140 79 aa4.96□□□□□ -1.62
APOBEC3A-203ENST00000488758 C10orf25Q5T742 122 aa4.96□□□□□ -1.62
APOBEC3A-203ENST00000488758 Q6ZRU5 148 aa4.96□□□□□ -1.62
APOBEC3A-203ENST00000488758 Q6ZVH6 145 aa4.96□□□□□ -1.62
APOBEC3A-203ENST00000488758 SPANXB1Q9NS25 103 aaPredicted RBP4.96□□□□□ -1.62
APOBEC3A-203ENST00000488758 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 LRCOL1A6NCL2 159 aa4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 GCSHP23434 173 aa4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 COX17Q14061 63 aa4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 WFDC2Q14508 124 aa4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 C9orf116Q5BN46 136 aaPredicted RBP4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 ADAMTSL4-AS1Q5T5F5 129 aa4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 COPS9Q8WXC6 57 aa4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 CARD19Q96LW7 228 aa4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 SPANXDQ9BXN6 97 aa4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 SPANXCQ9NY87 97 aa4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 C6orf48Q9UBA6 75 aa4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 ALMS1Q8TCU4 4167 aa4.95□□□□□ -1.62
APOBEC3A-203ENST00000488758 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.94□□□□□ -1.62
APOBEC3A-203ENST00000488758 A0A087WTM6 91 aa4.94□□□□□ -1.62
APOBEC3A-203ENST00000488758 M0R143 59 aa4.94□□□□□ -1.62
APOBEC3A-203ENST00000488758 IFITM1P13164 125 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms