RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
HLA-DOB-209ENST00000488325 MYCBP2O75592 4640 aa8.11□□□□□ -1.11
HLA-DOB-209ENST00000488325 K7EP13 123 aa8.11□□□□□ -1.11
HLA-DOB-209ENST00000488325 TSPEAR-AS2P59090 65 aa8.11□□□□□ -1.11
HLA-DOB-209ENST00000488325 C2orf91Q6ZV80 131 aa8.11□□□□□ -1.11
HLA-DOB-209ENST00000488325 C5orf38Q86SI9 138 aa8.11□□□□□ -1.11
HLA-DOB-209ENST00000488325 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
HLA-DOB-209ENST00000488325 IGLV10-54A0A075B6I4 117 aa8.1□□□□□ -1.11
HLA-DOB-209ENST00000488325 GAGE12HA6NDE8 117 aa8.1□□□□□ -1.11
HLA-DOB-209ENST00000488325 APOMO95445 188 aa8.1□□□□□ -1.11
HLA-DOB-209ENST00000488325 SFTA2Q6UW10 78 aa8.1□□□□□ -1.11
HLA-DOB-209ENST00000488325 C1orf43Q9BWL3 253 aa8.1□□□□□ -1.11
HLA-DOB-209ENST00000488325 TP73-AS1Q9UF72 201 aa8.1□□□□□ -1.11
HLA-DOB-209ENST00000488325 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.11
HLA-DOB-209ENST00000488325 M0R143 59 aa8.09□□□□□ -1.11
HLA-DOB-209ENST00000488325 INAFM2P0DMQ5 153 aa8.09□□□□□ -1.11
HLA-DOB-209ENST00000488325 MALP21145 153 aa8.09□□□□□ -1.11
HLA-DOB-209ENST00000488325 HSD52Q0P140 79 aa8.09□□□□□ -1.11
HLA-DOB-209ENST00000488325 FOXI1Q12951 378 aa8.09□□□□□ -1.11
HLA-DOB-209ENST00000488325 COX7B2Q8TF08 81 aa8.09□□□□□ -1.11
HLA-DOB-209ENST00000488325 RMI2Q96E14 147 aa8.09□□□□□ -1.11
HLA-DOB-209ENST00000488325 Q9H8V8 135 aa8.09□□□□□ -1.11
HLA-DOB-209ENST00000488325 IBA57-AS1B1ANH7 110 aa8.08□□□□□ -1.12
HLA-DOB-209ENST00000488325 NDUFA1O15239 70 aa8.08□□□□□ -1.12
HLA-DOB-209ENST00000488325 PRSS2P07478 247 aa8.08□□□□□ -1.12
HLA-DOB-209ENST00000488325 TAL2Q16559 108 aa8.08□□□□□ -1.12
HLA-DOB-209ENST00000488325 TOMM7Q9P0U1 55 aa8.08□□□□□ -1.12
HLA-DOB-209ENST00000488325 J3QL48 77 aa8.07□□□□□ -1.12
HLA-DOB-209ENST00000488325 HERV-K104P63124 156 aa8.07□□□□□ -1.12
HLA-DOB-209ENST00000488325 Q8IZM0 81 aa8.07□□□□□ -1.12
HLA-DOB-209ENST00000488325 TMEM238C9JI98 176 aa8.06□□□□□ -1.12
HLA-DOB-209ENST00000488325 CXCL5P42830 114 aa8.06□□□□□ -1.12
HLA-DOB-209ENST00000488325 CFAP161Q6P656 301 aa8.06□□□□□ -1.12
HLA-DOB-209ENST00000488325 ORAOV1Q8WV07 137 aa8.06□□□□□ -1.12
HLA-DOB-209ENST00000488325 SPANXB1Q9NS25 103 aaPredicted RBP8.06□□□□□ -1.12
HLA-DOB-209ENST00000488325 IGKV2D-24A0A075B6R9 120 aa8.05□□□□□ -1.12
HLA-DOB-209ENST00000488325 A0A0J9YXY3 114 aa8.05□□□□□ -1.12
HLA-DOB-209ENST00000488325 EPM2AB3EWF7 344 aa8.05□□□□□ -1.12
HLA-DOB-209ENST00000488325 TIMM17BO60830 172 aa8.05□□□□□ -1.12
HLA-DOB-209ENST00000488325 CIRBPQ14011 172 aaKnown RBP8.05□□□□□ -1.12
HLA-DOB-209ENST00000488325 C6orf226Q5I0X4 101 aa8.05□□□□□ -1.12
HLA-DOB-209ENST00000488325 HIST1H4GQ99525 98 aa8.05□□□□□ -1.12
HLA-DOB-209ENST00000488325 FLG2Q5D862 2391 aaPredicted RBP8.04□□□□□ -1.12
HLA-DOB-209ENST00000488325 HINT1P49773 126 aaPredicted RBP8.04□□□□□ -1.12
HLA-DOB-209ENST00000488325 SRSF9Q13242 221 aaKnown RBP eCLIP8.04□□□□□ -1.12
HLA-DOB-209ENST00000488325 TTC32Q5I0X7 151 aa8.04□□□□□ -1.12
HLA-DOB-209ENST00000488325 ZNF625Q96I27 306 aaPredicted RBP8.04□□□□□ -1.12
HLA-DOB-209ENST00000488325 Q9HAA7 133 aa8.04□□□□□ -1.12
HLA-DOB-209ENST00000488325 COX11Q9Y6N1 276 aa8.04□□□□□ -1.12
HLA-DOB-209ENST00000488325 BATFQ16520 125 aa8.03□□□□□ -1.12
HLA-DOB-209ENST00000488325 MEIG1Q5JSS6 88 aa8.03□□□□□ -1.12
HLA-DOB-209ENST00000488325 BVES-AS1Q5T3Y7 98 aa8.03□□□□□ -1.12
HLA-DOB-209ENST00000488325 KRTAP26-1Q6PEX3 210 aa8.03□□□□□ -1.12
HLA-DOB-209ENST00000488325 Q6ZR54 194 aa8.03□□□□□ -1.12
HLA-DOB-209ENST00000488325 Q6ZVH6 145 aa8.03□□□□□ -1.12
HLA-DOB-209ENST00000488325 SNHG12Q9BXW3 62 aa8.03□□□□□ -1.12
HLA-DOB-209ENST00000488325 GCSHP23434 173 aa8.02□□□□□ -1.13
HLA-DOB-209ENST00000488325 CKS1BP61024 79 aa8.02□□□□□ -1.13
HLA-DOB-209ENST00000488325 SPAG11BQ08648 103 aa8.02□□□□□ -1.13
HLA-DOB-209ENST00000488325 LBHQ53QV2 105 aaPredicted RBP8.02□□□□□ -1.13
HLA-DOB-209ENST00000488325 CEND1Q8N111 149 aa8.02□□□□□ -1.13
HLA-DOB-209ENST00000488325 TM2D2Q9BX73 214 aa8.02□□□□□ -1.13
HLA-DOB-209ENST00000488325 EREGO14944 169 aa8.01□□□□□ -1.13
HLA-DOB-209ENST00000488325 SPANXDQ9BXN6 97 aa8.01□□□□□ -1.13
HLA-DOB-209ENST00000488325 SPANXCQ9NY87 97 aa8.01□□□□□ -1.13
HLA-DOB-209ENST00000488325 HMCN2Q8NDA2 5059 aa8□□□□□ -1.13
HLA-DOB-209ENST00000488325 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
HLA-DOB-209ENST00000488325 A6NDN8 102 aa8□□□□□ -1.13
HLA-DOB-209ENST00000488325 A6NJY4 79 aa8□□□□□ -1.13
HLA-DOB-209ENST00000488325 PTTG1IPP53801 180 aa8□□□□□ -1.13
HLA-DOB-209ENST00000488325 TNP2Q05952 138 aa8□□□□□ -1.13
HLA-DOB-209ENST00000488325 KIAA0087Q14695 138 aa8□□□□□ -1.13
HLA-DOB-209ENST00000488325 C1orf134Q5TEV5 83 aa8□□□□□ -1.13
HLA-DOB-209ENST00000488325 COPS9Q8WXC6 57 aa8□□□□□ -1.13
HLA-DOB-209ENST00000488325 F8WDY8 70 aa7.99□□□□□ -1.13
HLA-DOB-209ENST00000488325 ZNF561-AS1K7EIQ3 104 aa7.99□□□□□ -1.13
HLA-DOB-209ENST00000488325 IFITM1P13164 125 aa7.99□□□□□ -1.13
HLA-DOB-209ENST00000488325 FAT1Q14517 4588 aa7.99□□□□□ -1.13
HLA-DOB-209ENST00000488325 COL5A1-AS1Q5SY13 56 aa7.99□□□□□ -1.13
HLA-DOB-209ENST00000488325 NBDYA0A0U1RRE5 68 aa7.98□□□□□ -1.13
HLA-DOB-209ENST00000488325 SMCPP49901 116 aaPredicted RBP7.98□□□□□ -1.13
HLA-DOB-209ENST00000488325 C2orf48Q96LS8 159 aa7.98□□□□□ -1.13
HLA-DOB-209ENST00000488325 LITAFQ99732 161 aa7.98□□□□□ -1.13
HLA-DOB-209ENST00000488325 FXYD2P54710 66 aa7.97□□□□□ -1.13
HLA-DOB-209ENST00000488325 RPL24P83731 157 aaKnown RBP7.97□□□□□ -1.13
HLA-DOB-209ENST00000488325 SMIM13P0DJ93 91 aa7.96□□□□□ -1.14
HLA-DOB-209ENST00000488325 LINC00158P58513 81 aa7.96□□□□□ -1.14
HLA-DOB-209ENST00000488325 COX17Q14061 63 aa7.96□□□□□ -1.14
HLA-DOB-209ENST00000488325 C2orf82Q6UX34 121 aa7.96□□□□□ -1.14
HLA-DOB-209ENST00000488325 C15orf56Q8N910 161 aa7.96□□□□□ -1.14
HLA-DOB-209ENST00000488325 NTN5Q8WTR8 489 aaPredicted RBP7.96□□□□□ -1.14
HLA-DOB-209ENST00000488325 ERG28Q9UKR5 140 aa7.96□□□□□ -1.14
HLA-DOB-209ENST00000488325 GVQW2A0A096LPI5 108 aaPredicted RBP7.95□□□□□ -1.14
HLA-DOB-209ENST00000488325 PSCAO43653 123 aa7.95□□□□□ -1.14
HLA-DOB-209ENST00000488325 HIGD2BQ4VC39 106 aa7.95□□□□□ -1.14
HLA-DOB-209ENST00000488325 ADAMTSL4-AS1Q5T5F5 129 aa7.95□□□□□ -1.14
HLA-DOB-209ENST00000488325 MUSTN1Q8IVN3 82 aa7.95□□□□□ -1.14
HLA-DOB-209ENST00000488325 CAMK2N2Q96S95 79 aa7.95□□□□□ -1.14
HLA-DOB-209ENST00000488325 KRTAP1-5Q9BYS1 174 aa7.95□□□□□ -1.14
HLA-DOB-209ENST00000488325 PPDPFQ9H3Y8 114 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms