RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 LINC00469Q8N7U9 141 aa14.56□□□□□ -0.08
STRADB-209ENST00000488196 TRBV30A0A0K0K1B3 111 aa14.55□□□□□ -0.08
STRADB-209ENST00000488196 TINCRA0A1B0GVN0 87 aa14.55□□□□□ -0.08
STRADB-209ENST00000488196 PRR3P79522 188 aaKnown RBP14.55□□□□□ -0.08
STRADB-209ENST00000488196 PMVKQ15126 192 aa14.55□□□□□ -0.08
STRADB-209ENST00000488196 GAGE2EQ4V326 116 aa14.55□□□□□ -0.08
STRADB-209ENST00000488196 PACRGQ96M98 296 aaPredicted RBP14.55□□□□□ -0.08
STRADB-209ENST00000488196 GAGE2DQ9UEU5 116 aa14.55□□□□□ -0.08
STRADB-209ENST00000488196 C6orf226Q5I0X4 101 aa14.54□□□□□ -0.08
STRADB-209ENST00000488196 Q8IZM0 81 aa14.54□□□□□ -0.08
STRADB-209ENST00000488196 FAT3Q8TDW7 4589 aa14.53□□□□□ -0.08
STRADB-209ENST00000488196 OXTP01178 125 aa14.53□□□□□ -0.08
STRADB-209ENST00000488196 CKS1BP61024 79 aa14.52□□□□□ -0.09
STRADB-209ENST00000488196 IGLV5-45A0A087WSX0 123 aa14.51□□□□□ -0.09
STRADB-209ENST00000488196 FAM168BA1KXE4 195 aa14.51□□□□□ -0.09
STRADB-209ENST00000488196 HBDP02042 147 aa14.51□□□□□ -0.09
STRADB-209ENST00000488196 SMIM1B2RUZ4 78 aa14.5□□□□□ -0.09
STRADB-209ENST00000488196 NDUFA6P56556 154 aa14.5□□□□□ -0.09
STRADB-209ENST00000488196 RAB5BP61020 215 aa14.5□□□□□ -0.09
STRADB-209ENST00000488196 PHF5AQ7RTV0 110 aaKnown RBP14.5□□□□□ -0.09
STRADB-209ENST00000488196 NDUFC2-KCTD14E9PQ53 114 aa14.49□□□□□ -0.09
STRADB-209ENST00000488196 PDZD11Q5EBL8 140 aa14.49□□□□□ -0.09
STRADB-209ENST00000488196 SPINK8P0C7L1 97 aa14.48□□□□□ -0.09
STRADB-209ENST00000488196 FAM19A5Q7Z5A7 132 aaPredicted RBP14.46□□□□□ -0.09
STRADB-209ENST00000488196 COX7B2Q8TF08 81 aa14.45□□□□□ -0.1
STRADB-209ENST00000488196 F8VRH5 84 aa14.44□□□□□ -0.1
STRADB-209ENST00000488196 IGLC3P0DOY3 106 aa14.44□□□□□ -0.1
STRADB-209ENST00000488196 C9orf129Q5T035 196 aaKnown RBP14.44□□□□□ -0.1
STRADB-209ENST00000488196 KRTAP7-1Q8IUC3 87 aa14.44□□□□□ -0.1
STRADB-209ENST00000488196 ATP5LO75964 103 aa14.43□□□□□ -0.1
STRADB-209ENST00000488196 PSORS1C2Q9UIG4 136 aa14.43□□□□□ -0.1
STRADB-209ENST00000488196 CXCL5P42830 114 aa14.42□□□□□ -0.1
STRADB-209ENST00000488196 CHCHD1Q96BP2 118 aaKnown RBP14.42□□□□□ -0.1
STRADB-209ENST00000488196 H3BRM9 83 aa14.41□□□□□ -0.1
STRADB-209ENST00000488196 TRGC2P03986 189 aa14.41□□□□□ -0.1
STRADB-209ENST00000488196 BAGE3Q86Y29 109 aa14.41□□□□□ -0.1
STRADB-209ENST00000488196 ZNF22P17026 224 aaPredicted RBP14.4□□□□□ -0.1
STRADB-209ENST00000488196 KRTAP11-1Q8IUC1 163 aa14.4□□□□□ -0.1
STRADB-209ENST00000488196 XAGE1AQ9HD64 81 aa14.39□□□□□ -0.11
STRADB-209ENST00000488196 SRSF9Q13242 221 aaKnown RBP eCLIP14.38□□□□□ -0.11
STRADB-209ENST00000488196 C11orf86A6NJI1 115 aa14.37□□□□□ -0.11
STRADB-209ENST00000488196 M0QXV9 152 aa14.37□□□□□ -0.11
STRADB-209ENST00000488196 MT1HL1P0DM35 61 aa14.37□□□□□ -0.11
STRADB-209ENST00000488196 SPINK6Q6UWN8 80 aa14.37□□□□□ -0.11
STRADB-209ENST00000488196 C1orf137Q5JT78 98 aa14.36□□□□□ -0.11
STRADB-209ENST00000488196 FAM19A2Q8N3H0 131 aa14.36□□□□□ -0.11
STRADB-209ENST00000488196 IGLV5-39A0A0G2JS06 123 aa14.35□□□□□ -0.11
STRADB-209ENST00000488196 COLCA2A8K830 154 aa14.35□□□□□ -0.11
STRADB-209ENST00000488196 SERTAD4-AS1Q5TG53 156 aa14.35□□□□□ -0.11
STRADB-209ENST00000488196 IFI27L1Q96BM0 104 aa14.35□□□□□ -0.11
STRADB-209ENST00000488196 HSBP1O75506 76 aa14.34□□□□□ -0.11
STRADB-209ENST00000488196 CHTOPQ9Y3Y2 248 aaKnown RBP14.34□□□□□ -0.11
STRADB-209ENST00000488196 TMEM170BQ5T4T1 132 aa14.33□□□□□ -0.12
STRADB-209ENST00000488196 LINC00310P59036 64 aa14.31□□□□□ -0.12
STRADB-209ENST00000488196 UBE2BP63146 152 aa14.31□□□□□ -0.12
STRADB-209ENST00000488196 SERF1AO75920 110 aa14.3□□□□□ -0.12
STRADB-209ENST00000488196 TRAV12-1A0A0B4J245 112 aa14.29□□□□□ -0.12
STRADB-209ENST00000488196 C22orf24Q9Y442 160 aa14.29□□□□□ -0.12
STRADB-209ENST00000488196 LINC01600Q96MT4 127 aa14.28□□□□□ -0.12
STRADB-209ENST00000488196 SCO1O75880 301 aa14.27□□□□□ -0.13
STRADB-209ENST00000488196 IGLV7-43P04211 117 aa14.27□□□□□ -0.13
STRADB-209ENST00000488196 REG3GQ6UW15 175 aa14.27□□□□□ -0.13
STRADB-209ENST00000488196 NUPR1O60356 82 aa14.26□□□□□ -0.13
STRADB-209ENST00000488196 PFN2P35080 140 aa14.25□□□□□ -0.13
STRADB-209ENST00000488196 ZNF625Q96I27 306 aaPredicted RBP14.24□□□□□ -0.13
STRADB-209ENST00000488196 TMEM223A0PJW6 202 aa14.23□□□□□ -0.13
STRADB-209ENST00000488196 H0Y8G0 127 aa14.23□□□□□ -0.13
STRADB-209ENST00000488196 TNXBP22105 4242 aa14.22□□□□□ -0.13
STRADB-209ENST00000488196 LEPROTL1O95214 131 aa14.22□□□□□ -0.13
STRADB-209ENST00000488196 LBHQ53QV2 105 aaPredicted RBP14.22□□□□□ -0.13
STRADB-209ENST00000488196 MRPL55Q7Z7F7 128 aaKnown RBP14.21□□□□□ -0.13
STRADB-209ENST00000488196 TP73-AS1Q9UF72 201 aa14.21□□□□□ -0.13
STRADB-209ENST00000488196 ERG28Q9UKR5 140 aa14.21□□□□□ -0.13
STRADB-209ENST00000488196 ODF1Q14990 250 aa14.2□□□□□ -0.14
STRADB-209ENST00000488196 FABP4P15090 132 aa14.19□□□□□ -0.14
STRADB-209ENST00000488196 PLA2G2DQ9UNK4 145 aa14.19□□□□□ -0.14
STRADB-209ENST00000488196 DIRC1Q969H9 104 aa14.18□□□□□ -0.14
STRADB-209ENST00000488196 LINC00167Q96N53 147 aa14.18□□□□□ -0.14
STRADB-209ENST00000488196 KRTAP10-8P60410 259 aa14.17□□□□□ -0.14
STRADB-209ENST00000488196 GAGE10A6NGK3 116 aa14.16□□□□□ -0.14
STRADB-209ENST00000488196 RPL37AP8A6NKH3 93 aa14.16□□□□□ -0.14
STRADB-209ENST00000488196 SND1-IT1Q9HBX3 110 aa14.16□□□□□ -0.14
STRADB-209ENST00000488196 IGLV5-37A0A075B6J1 123 aa14.15□□□□□ -0.14
STRADB-209ENST00000488196 H0Y9J4 135 aa14.15□□□□□ -0.14
STRADB-209ENST00000488196 COX17Q14061 63 aa14.15□□□□□ -0.14
STRADB-209ENST00000488196 SFTA2Q6UW10 78 aa14.15□□□□□ -0.14
STRADB-209ENST00000488196 HSPB8Q9UJY1 196 aa14.15□□□□□ -0.14
STRADB-209ENST00000488196 NKAPP1Q8N9T2 125 aa14.14□□□□□ -0.15
STRADB-209ENST00000488196 HIST1H2BKO60814 126 aa14.12□□□□□ -0.15
STRADB-209ENST00000488196 HIST1H2BJP06899 126 aa14.12□□□□□ -0.15
STRADB-209ENST00000488196 HIST1H2BOP23527 126 aa14.12□□□□□ -0.15
STRADB-209ENST00000488196 HIST1H2BBP33778 126 aa14.12□□□□□ -0.15
STRADB-209ENST00000488196 HIST1H2BDP58876 126 aa14.12□□□□□ -0.15
STRADB-209ENST00000488196 HIST1H2BCP62807 126 aa14.12□□□□□ -0.15
STRADB-209ENST00000488196 HIST2H2BEQ16778 126 aa14.12□□□□□ -0.15
STRADB-209ENST00000488196 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.12□□□□□ -0.15
STRADB-209ENST00000488196 HIST1H2BHQ93079 126 aa14.12□□□□□ -0.15
STRADB-209ENST00000488196 HIST1H2BNQ99877 126 aa14.12□□□□□ -0.15
STRADB-209ENST00000488196 HIST1H2BMQ99879 126 aa14.12□□□□□ -0.15
STRADB-209ENST00000488196 A0A0U1RRA0 63 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms