RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 LCN9Q8WX39 176 aa-0.88□□□□□ -2.55
CCDC66-221ENST00000487739 LINC01600Q96MT4 127 aa-0.88□□□□□ -2.55
CCDC66-221ENST00000487739 UQCR10Q9UDW1 63 aa-0.88□□□□□ -2.55
CCDC66-221ENST00000487739 AKAP9Q99996 3911 aa-0.89□□□□□ -2.55
CCDC66-221ENST00000487739 MARF1Q9Y4F3 1742 aaKnown RBP-0.89□□□□□ -2.55
CCDC66-221ENST00000487739 PKHD1L1Q86WI1 4243 aa-0.89□□□□□ -2.55
CCDC66-221ENST00000487739 DMXL1Q9Y485 3027 aa-0.89□□□□□ -2.55
CCDC66-221ENST00000487739 ZFHX3Q15911 3703 aa-0.89□□□□□ -2.55
CCDC66-221ENST00000487739 C9orf153Q5TBE3 101 aa-0.89□□□□□ -2.55
CCDC66-221ENST00000487739 TSC22D3Q99576 134 aa-0.89□□□□□ -2.55
CCDC66-221ENST00000487739 EPPK1P58107 5090 aaKnown RBP-0.89□□□□□ -2.55
CCDC66-221ENST00000487739 EHBP1L1Q8N3D4 1523 aa-0.89□□□□□ -2.55
CCDC66-221ENST00000487739 FAT3Q8TDW7 4589 aa-0.89□□□□□ -2.55
CCDC66-221ENST00000487739 CUBNO60494 3623 aa-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 COL14A1Q05707 1796 aaKnown RBP-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 COL4A6Q14031 1691 aa-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 A2ML1A8K2U0 1454 aa-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 KTN1Q86UP2 1357 aaKnown RBP-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 MT1AP04731 61 aa-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 AKAIN1P0CW23 69 aa-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 COX8AP10176 69 aa-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 C9orf62Q8N4C0 152 aa-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 XRN1Q8IZH2 1706 aaKnown RBP-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 TOP2BQ02880 1626 aa-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 AKAP13Q12802 2813 aa-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 KALRNO60229 2985 aa-0.9□□□□□ -2.55
CCDC66-221ENST00000487739 LAMA2P24043 3122 aaKnown RBP-0.91□□□□□ -2.55
CCDC66-221ENST00000487739 SETBP1Q9Y6X0 1596 aa-0.91□□□□□ -2.55
CCDC66-221ENST00000487739 C1orf167Q5SNV9 1468 aa-0.91□□□□□ -2.55
CCDC66-221ENST00000487739 MUC17Q685J3 4493 aa-0.91□□□□□ -2.55
CCDC66-221ENST00000487739 FASNP49327 2511 aaKnown RBP-0.91□□□□□ -2.55
CCDC66-221ENST00000487739 K7EP13 123 aa-0.91□□□□□ -2.56
CCDC66-221ENST00000487739 SFTA2Q6UW10 78 aa-0.91□□□□□ -2.56
CCDC66-221ENST00000487739 RYR3Q15413 4870 aa-0.91□□□□□ -2.56
CCDC66-221ENST00000487739 A0A0G2JMZ2 1700 aa-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 NALCNQ8IZF0 1738 aa-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 NBASA2RRP1 2371 aa-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 UBE2L5PA0A1B0GUS4 154 aa-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 GNG11P61952 73 aa-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 UBE2L3P68036 154 aaKnown RBP-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 WHAMMP3Q1A5X7 153 aa-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 PP6455Q8WZ26 134 aa-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 USMG5Q96IX5 58 aa-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 ZZEF1O43149 2961 aa-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 ADAMTS12P58397 1594 aa-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 VPS13BQ7Z7G8 4022 aa-0.92□□□□□ -2.56
CCDC66-221ENST00000487739 LELP1Q5T871 98 aa-0.93□□□□□ -2.56
CCDC66-221ENST00000487739 FAM167A-AS1Q96KT0 104 aa-0.93□□□□□ -2.56
CCDC66-221ENST00000487739 DPH3P1Q9H4G8 78 aa-0.93□□□□□ -2.56
CCDC66-221ENST00000487739 MANBALQ9NQG1 85 aa-0.93□□□□□ -2.56
CCDC66-221ENST00000487739 TROQ12816 1431 aaPredicted RBP-0.93□□□□□ -2.56
CCDC66-221ENST00000487739 SPG11Q96JI7 2443 aa-0.93□□□□□ -2.56
CCDC66-221ENST00000487739 PDCD11Q14690 1871 aaKnown RBP-0.93□□□□□ -2.56
CCDC66-221ENST00000487739 TEP1Q99973 2627 aaKnown RBP-0.93□□□□□ -2.56
CCDC66-221ENST00000487739 ADGRL2O95490 1459 aa-0.93□□□□□ -2.56
CCDC66-221ENST00000487739 PTPN23Q9H3S7 1636 aa-0.93□□□□□ -2.56
CCDC66-221ENST00000487739 SLIT1O75093 1534 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 A0A0C4DFX4 3053 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 NIPBLQ6KC79 2804 aaeCLIP-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 SCAPERQ9BY12 1400 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 FAM223BA6NKX1 122 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 H0YGG7 62 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 H3BNG1 76 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 S100A12P80511 92 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 Q0VG73 95 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 PRO1933Q9H354 126 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 ANKRD36A6QL64 1941 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 MYO18BQ8IUG5 2567 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 NLRP1Q9C000 1473 aa-0.94□□□□□ -2.56
CCDC66-221ENST00000487739 HYDINQ4G0P3 5121 aa-0.95□□□□□ -2.56
CCDC66-221ENST00000487739 ROCK2O75116 1388 aaKnown RBP-0.95□□□□□ -2.56
CCDC66-221ENST00000487739 BIRC6Q9NR09 4857 aa-0.95□□□□□ -2.56
CCDC66-221ENST00000487739 VPS13DQ5THJ4 4388 aa-0.95□□□□□ -2.56
CCDC66-221ENST00000487739 SNAPC5O75971 98 aa-0.95□□□□□ -2.56
CCDC66-221ENST00000487739 UBE2D3P61077 147 aa-0.95□□□□□ -2.56
CCDC66-221ENST00000487739 UBE2D2P62837 147 aa-0.95□□□□□ -2.56
CCDC66-221ENST00000487739 DIP2CQ9Y2E4 1556 aa-0.96□□□□□ -2.56
CCDC66-221ENST00000487739 RYR1P21817 5038 aa-0.96□□□□□ -2.56
CCDC66-221ENST00000487739 NKTRP30414 1462 aaKnown RBP-0.96□□□□□ -2.56
CCDC66-221ENST00000487739 MYOM2P54296 1465 aa-0.96□□□□□ -2.56
CCDC66-221ENST00000487739 A0A1B0GWA3 101 aa-0.96□□□□□ -2.56
CCDC66-221ENST00000487739 FAM24AA6NFZ4 105 aa-0.96□□□□□ -2.56
CCDC66-221ENST00000487739 TRAPPC2P0DI81 140 aa-0.96□□□□□ -2.56
CCDC66-221ENST00000487739 TRAPPC2BP0DI82 140 aa-0.96□□□□□ -2.56
CCDC66-221ENST00000487739 HEPN1Q6WQI6 88 aa-0.96□□□□□ -2.56
CCDC66-221ENST00000487739 C1orf54Q8WWF1 131 aa-0.96□□□□□ -2.56
CCDC66-221ENST00000487739 REV3LO60673 3130 aa-0.96□□□□□ -2.56
CCDC66-221ENST00000487739 DOPEY1Q5JWR5 2465 aa-0.97□□□□□ -2.56
CCDC66-221ENST00000487739 F6UZH7 168 aa-0.97□□□□□ -2.56
CCDC66-221ENST00000487739 I3L3M4 83 aa-0.97□□□□□ -2.56
CCDC66-221ENST00000487739 HMGN1P05114 100 aa-0.97□□□□□ -2.56
CCDC66-221ENST00000487739 ATP5EP56381 51 aaPredicted RBP-0.97□□□□□ -2.56
CCDC66-221ENST00000487739 ANKRD11Q6UB99 2663 aaPredicted RBP-0.97□□□□□ -2.57
CCDC66-221ENST00000487739 TRANK1O15050 2925 aa-0.98□□□□□ -2.57
CCDC66-221ENST00000487739 PLEKHH2Q8IVE3 1493 aa-0.98□□□□□ -2.57
CCDC66-221ENST00000487739 SEC11AP67812 179 aa-0.98□□□□□ -2.57
CCDC66-221ENST00000487739 WFDC13Q8IUB5 93 aa-0.98□□□□□ -2.57
CCDC66-221ENST00000487739 CC2D2AQ9P2K1 1620 aa-0.98□□□□□ -2.57
CCDC66-221ENST00000487739 CHD1O14646 1710 aa-0.98□□□□□ -2.57
CCDC66-221ENST00000487739 RGPD2P0DJD1 1756 aa-0.98□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms