RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TMEM136Q6ZRR5 245 aa7.45□□□□□ -1.22
VPS16-208ENST00000487461 ATP5L2Q7Z4Y8 100 aa7.45□□□□□ -1.22
VPS16-208ENST00000487461 KRTAP11-1Q8IUC1 163 aa7.45□□□□□ -1.22
VPS16-208ENST00000487461 FAM168BA1KXE4 195 aa7.44□□□□□ -1.22
VPS16-208ENST00000487461 PPBPP02775 128 aa7.44□□□□□ -1.22
VPS16-208ENST00000487461 C6orf48Q9UBA6 75 aa7.44□□□□□ -1.22
VPS16-208ENST00000487461 NDUFA1O15239 70 aa7.43□□□□□ -1.22
VPS16-208ENST00000487461 TLX1NBP0CAT3 122 aa7.43□□□□□ -1.22
VPS16-208ENST00000487461 KIAA0087Q14695 138 aa7.43□□□□□ -1.22
VPS16-208ENST00000487461 LBHQ53QV2 105 aaPredicted RBP7.43□□□□□ -1.22
VPS16-208ENST00000487461 A0A087WZ39 114 aa7.42□□□□□ -1.22
VPS16-208ENST00000487461 IGLV7-43P04211 117 aa7.42□□□□□ -1.22
VPS16-208ENST00000487461 DDTP30046 118 aa7.42□□□□□ -1.22
VPS16-208ENST00000487461 GAGE2EQ4V326 116 aa7.42□□□□□ -1.22
VPS16-208ENST00000487461 LINC00242Q5T6M2 205 aa7.42□□□□□ -1.22
VPS16-208ENST00000487461 KRTAP7-1Q8IUC3 87 aa7.42□□□□□ -1.22
VPS16-208ENST00000487461 ORMDL3Q8N138 153 aa7.42□□□□□ -1.22
VPS16-208ENST00000487461 PRELID3AQ96N28 172 aa7.42□□□□□ -1.22
VPS16-208ENST00000487461 GAGE2DQ9UEU5 116 aa7.42□□□□□ -1.22
VPS16-208ENST00000487461 PYGO1Q9Y3Y4 419 aa7.42□□□□□ -1.22
VPS16-208ENST00000487461 IGLV4-3A0A075B6K6 122 aa7.41□□□□□ -1.22
VPS16-208ENST00000487461 NUPR1O60356 82 aa7.41□□□□□ -1.22
VPS16-208ENST00000487461 BAGE3Q86Y29 109 aa7.41□□□□□ -1.22
VPS16-208ENST00000487461 LOC389332A0A1B0GUA5 103 aa7.4□□□□□ -1.22
VPS16-208ENST00000487461 PRSS47A8MTI9 375 aa7.4□□□□□ -1.22
VPS16-208ENST00000487461 IFI27P40305 119 aaPredicted RBP7.4□□□□□ -1.22
VPS16-208ENST00000487461 LINC00310P59036 64 aa7.4□□□□□ -1.22
VPS16-208ENST00000487461 FAM19A5Q7Z5A7 132 aaPredicted RBP7.4□□□□□ -1.22
VPS16-208ENST00000487461 PRR26Q8N8Z3 221 aa7.4□□□□□ -1.22
VPS16-208ENST00000487461 DIRC1Q969H9 104 aa7.4□□□□□ -1.22
VPS16-208ENST00000487461 SERF1AO75920 110 aa7.39□□□□□ -1.23
VPS16-208ENST00000487461 C2orf82Q6UX34 121 aa7.39□□□□□ -1.23
VPS16-208ENST00000487461 TMEM141Q96I45 108 aa7.39□□□□□ -1.23
VPS16-208ENST00000487461 C14orf144Q96I85 54 aa7.39□□□□□ -1.23
VPS16-208ENST00000487461 SCGB1D1O95968 90 aa7.38□□□□□ -1.23
VPS16-208ENST00000487461 UBE2D1P51668 147 aa7.38□□□□□ -1.23
VPS16-208ENST00000487461 ZC2HC1BQ5TFG8 222 aa7.38□□□□□ -1.23
VPS16-208ENST00000487461 TEX43Q6ZNM6 134 aa7.38□□□□□ -1.23
VPS16-208ENST00000487461 TRBV30A0A0K0K1B3 111 aa7.37□□□□□ -1.23
VPS16-208ENST00000487461 H0Y9J4 135 aa7.37□□□□□ -1.23
VPS16-208ENST00000487461 C9orf129Q5T035 196 aaKnown RBP7.37□□□□□ -1.23
VPS16-208ENST00000487461 C2orf88Q9BSF0 95 aa7.37□□□□□ -1.23
VPS16-208ENST00000487461 NDUFC2-KCTD14E9PQ53 114 aa7.36□□□□□ -1.23
VPS16-208ENST00000487461 M0QXV9 152 aa7.36□□□□□ -1.23
VPS16-208ENST00000487461 LINC00173Q6ZV60 143 aa7.36□□□□□ -1.23
VPS16-208ENST00000487461 LINC01561Q8N1V8 128 aa7.36□□□□□ -1.23
VPS16-208ENST00000487461 Q8N8P6 123 aa7.36□□□□□ -1.23
VPS16-208ENST00000487461 AMELXQ99217 191 aa7.36□□□□□ -1.23
VPS16-208ENST00000487461 ALKBH7Q9BT30 221 aaPredicted RBP7.36□□□□□ -1.23
VPS16-208ENST00000487461 PRO1933Q9H354 126 aa7.36□□□□□ -1.23
VPS16-208ENST00000487461 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
VPS16-208ENST00000487461 LAMTOR2Q9Y2Q5 125 aa7.36□□□□□ -1.23
VPS16-208ENST00000487461 KRTAP1-4P0C5Y4 121 aa7.35□□□□□ -1.23
VPS16-208ENST00000487461 C2orf66Q6UXQ4 117 aa7.35□□□□□ -1.23
VPS16-208ENST00000487461 C18orf32Q8TCD1 76 aa7.35□□□□□ -1.23
VPS16-208ENST00000487461 VCX2Q9H322 139 aa7.35□□□□□ -1.23
VPS16-208ENST00000487461 CYSLTR1Q9Y271 337 aa7.35□□□□□ -1.23
VPS16-208ENST00000487461 IGIPA6NJ69 53 aa7.34□□□□□ -1.23
VPS16-208ENST00000487461 UBE2BP63146 152 aa7.34□□□□□ -1.23
VPS16-208ENST00000487461 KIAA1644Q3SXP7 199 aa7.34□□□□□ -1.23
VPS16-208ENST00000487461 CHCHD1Q96BP2 118 aaKnown RBP7.34□□□□□ -1.23
VPS16-208ENST00000487461 LPAP08519 4548 aa7.33□□□□□ -1.24
VPS16-208ENST00000487461 Q6ZN92 141 aa7.33□□□□□ -1.24
VPS16-208ENST00000487461 MIEN1Q9BRT3 115 aa7.33□□□□□ -1.24
VPS16-208ENST00000487461 TOMM7Q9P0U1 55 aa7.33□□□□□ -1.24
VPS16-208ENST00000487461 IGLV1-50A0A075B6I6 118 aa7.32□□□□□ -1.24
VPS16-208ENST00000487461 C20orf202A1L168 122 aa7.32□□□□□ -1.24
VPS16-208ENST00000487461 PRSS2P07478 247 aa7.32□□□□□ -1.24
VPS16-208ENST00000487461 PMCHL1Q16048 86 aa7.32□□□□□ -1.24
VPS16-208ENST00000487461 ORMDL2Q53FV1 153 aa7.32□□□□□ -1.24
VPS16-208ENST00000487461 FAM19A3Q7Z5A8 133 aa7.32□□□□□ -1.24
VPS16-208ENST00000487461 LINC00469Q8N7U9 141 aa7.32□□□□□ -1.24
VPS16-208ENST00000487461 HSBP1O75506 76 aa7.31□□□□□ -1.24
VPS16-208ENST00000487461 NPSP0C0P6 89 aa7.31□□□□□ -1.24
VPS16-208ENST00000487461 CKS1BP61024 79 aa7.31□□□□□ -1.24
VPS16-208ENST00000487461 C6orf226Q5I0X4 101 aa7.31□□□□□ -1.24
VPS16-208ENST00000487461 VAMP8Q9BV40 100 aa7.31□□□□□ -1.24
VPS16-208ENST00000487461 K7EMI3 77 aa7.3□□□□□ -1.24
VPS16-208ENST00000487461 M0R143 59 aa7.3□□□□□ -1.24
VPS16-208ENST00000487461 Q8IZM0 81 aa7.3□□□□□ -1.24
VPS16-208ENST00000487461 CDKN2A-AS1Q9UH64 79 aa7.3□□□□□ -1.24
VPS16-208ENST00000487461 C22orf24Q9Y442 160 aa7.3□□□□□ -1.24
VPS16-208ENST00000487461 C3orf79P0CE67 100 aa7.29□□□□□ -1.24
VPS16-208ENST00000487461 XAGE1AQ9HD64 81 aa7.29□□□□□ -1.24
VPS16-208ENST00000487461 NXT2Q9NPJ8 142 aaKnown RBP7.29□□□□□ -1.24
VPS16-208ENST00000487461 ZNF861PO60384 105 aa7.28□□□□□ -1.24
VPS16-208ENST00000487461 LINC00614P0C842 121 aa7.28□□□□□ -1.24
VPS16-208ENST00000487461 KRTDAPP60985 99 aa7.28□□□□□ -1.24
VPS16-208ENST00000487461 HERVK_113P63121 156 aa7.28□□□□□ -1.24
VPS16-208ENST00000487461 TOMM6Q96B49 74 aa7.28□□□□□ -1.24
VPS16-208ENST00000487461 SEC11AP67812 179 aa7.27□□□□□ -1.25
VPS16-208ENST00000487461 URB1-AS1Q96HZ7 61 aa7.27□□□□□ -1.25
VPS16-208ENST00000487461 TIMM17AQ99595 171 aa7.27□□□□□ -1.25
VPS16-208ENST00000487461 GEMIN7Q9H840 131 aaKnown RBP7.27□□□□□ -1.25
VPS16-208ENST00000487461 F8VRH5 84 aa7.26□□□□□ -1.25
VPS16-208ENST00000487461 G0S2P27469 103 aa7.26□□□□□ -1.25
VPS16-208ENST00000487461 RPL13AP40429 203 aaKnown RBP7.26□□□□□ -1.25
VPS16-208ENST00000487461 PAPPA-AS1Q5QFB9 102 aa7.26□□□□□ -1.25
VPS16-208ENST00000487461 FAM19A2Q8N3H0 131 aa7.26□□□□□ -1.25
VPS16-208ENST00000487461 SNHG12Q9BXW3 62 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms