RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 TRAPPC1Q9Y5R8 145 aa4.01□□□□□ -1.77
RTFDC1-209ENST00000487211 IGKV3OR2-268A0A0C4DH90 116 aa4□□□□□ -1.77
RTFDC1-209ENST00000487211 E9PLD3 99 aa4□□□□□ -1.77
RTFDC1-209ENST00000487211 LECT2O14960 151 aa4□□□□□ -1.77
RTFDC1-209ENST00000487211 SCO1O75880 301 aa4□□□□□ -1.77
RTFDC1-209ENST00000487211 MT-ND6P03923 174 aa4□□□□□ -1.77
RTFDC1-209ENST00000487211 ZNF25P17030 456 aaPredicted RBP4□□□□□ -1.77
RTFDC1-209ENST00000487211 RAB5AP20339 215 aa4□□□□□ -1.77
RTFDC1-209ENST00000487211 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
RTFDC1-209ENST00000487211 MIAQ16674 131 aa4□□□□□ -1.77
RTFDC1-209ENST00000487211 RNASE13Q5GAN3 156 aaKnown RBP4□□□□□ -1.77
RTFDC1-209ENST00000487211 ZNF664Q8N3J9 261 aa4□□□□□ -1.77
RTFDC1-209ENST00000487211 CSDC2Q9Y534 153 aaKnown RBP4□□□□□ -1.77
RTFDC1-209ENST00000487211 DNAH8Q96JB1 4490 aa3.99□□□□□ -1.77
RTFDC1-209ENST00000487211 TRAV8-4A0A0B4J246 113 aa3.99□□□□□ -1.77
RTFDC1-209ENST00000487211 LINC00959A0A1B0GUT2 108 aa3.99□□□□□ -1.77
RTFDC1-209ENST00000487211 LINC01546A6NGU7 62 aa3.99□□□□□ -1.77
RTFDC1-209ENST00000487211 COLCA2A8K830 154 aa3.99□□□□□ -1.77
RTFDC1-209ENST00000487211 CRPP02741 224 aa3.99□□□□□ -1.77
RTFDC1-209ENST00000487211 Q8N814 137 aa3.99□□□□□ -1.77
RTFDC1-209ENST00000487211 OR5A1Q8NGJ0 315 aa3.99□□□□□ -1.77
RTFDC1-209ENST00000487211 RMI2Q96E14 147 aa3.99□□□□□ -1.77
RTFDC1-209ENST00000487211 TMEM101Q96IK0 257 aa3.99□□□□□ -1.77
RTFDC1-209ENST00000487211 TIMM21Q9BVV7 248 aa3.99□□□□□ -1.77
RTFDC1-209ENST00000487211 IGIPA6NJ69 53 aa3.98□□□□□ -1.77
RTFDC1-209ENST00000487211 Q6ZUT4 128 aa3.98□□□□□ -1.77
RTFDC1-209ENST00000487211 LINC01561Q8N1V8 128 aa3.98□□□□□ -1.77
RTFDC1-209ENST00000487211 C18orf32Q8TCD1 76 aa3.98□□□□□ -1.77
RTFDC1-209ENST00000487211 CHCHD10Q8WYQ3 142 aaPredicted RBP3.98□□□□□ -1.77
RTFDC1-209ENST00000487211 NXT2Q9NPJ8 142 aaKnown RBP3.98□□□□□ -1.77
RTFDC1-209ENST00000487211 LRP2P98164 4655 aa3.97□□□□□ -1.77
RTFDC1-209ENST00000487211 C16orf90A8MZG2 172 aa3.97□□□□□ -1.77
RTFDC1-209ENST00000487211 K7EMI3 77 aa3.97□□□□□ -1.77
RTFDC1-209ENST00000487211 CCL25O15444 150 aa3.97□□□□□ -1.77
RTFDC1-209ENST00000487211 TRGC2P03986 189 aa3.97□□□□□ -1.77
RTFDC1-209ENST00000487211 XCL1P47992 114 aa3.97□□□□□ -1.77
RTFDC1-209ENST00000487211 MRPS36P82909 103 aaKnown RBP3.97□□□□□ -1.77
RTFDC1-209ENST00000487211 ORMDL2Q53FV1 153 aa3.97□□□□□ -1.77
RTFDC1-209ENST00000487211 SPANXA1Q9NS26 97 aa3.97□□□□□ -1.77
RTFDC1-209ENST00000487211 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.96□□□□□ -1.78
RTFDC1-209ENST00000487211 A0A096LNJ9 63 aa3.96□□□□□ -1.78
RTFDC1-209ENST00000487211 TRAV13-1A0A0B4J241 112 aa3.96□□□□□ -1.78
RTFDC1-209ENST00000487211 C1orf196B1AJZ1 125 aa3.96□□□□□ -1.78
RTFDC1-209ENST00000487211 LINC00614P0C842 121 aa3.96□□□□□ -1.78
RTFDC1-209ENST00000487211 KRTAP10-1P60331 282 aa3.96□□□□□ -1.78
RTFDC1-209ENST00000487211 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
RTFDC1-209ENST00000487211 SS18Q15532 418 aa3.96□□□□□ -1.78
RTFDC1-209ENST00000487211 TOMM6Q96B49 74 aa3.96□□□□□ -1.78
RTFDC1-209ENST00000487211 CYSLTR1Q9Y271 337 aa3.96□□□□□ -1.78
RTFDC1-209ENST00000487211 FAM168BA1KXE4 195 aa3.95□□□□□ -1.78
RTFDC1-209ENST00000487211 COX6A2Q02221 97 aa3.95□□□□□ -1.78
RTFDC1-209ENST00000487211 SMAGPQ0VAQ4 97 aa3.95□□□□□ -1.78
RTFDC1-209ENST00000487211 PMCHL1Q16048 86 aa3.95□□□□□ -1.78
RTFDC1-209ENST00000487211 LINC00173Q6ZV60 143 aa3.95□□□□□ -1.78
RTFDC1-209ENST00000487211 FA2HQ7L5A8 372 aa3.95□□□□□ -1.78
RTFDC1-209ENST00000487211 C15orf56Q8N910 161 aa3.95□□□□□ -1.78
RTFDC1-209ENST00000487211 TMEM141Q96I45 108 aa3.95□□□□□ -1.78
RTFDC1-209ENST00000487211 AMELXQ99217 191 aa3.95□□□□□ -1.78
RTFDC1-209ENST00000487211 PPDPFQ9H3Y8 114 aa3.95□□□□□ -1.78
RTFDC1-209ENST00000487211 IGLV8-61A0A075B6I0 122 aa3.94□□□□□ -1.78
RTFDC1-209ENST00000487211 IGHV3OR16-9A0A0B4J2B5 98 aa3.94□□□□□ -1.78
RTFDC1-209ENST00000487211 NUPR1O60356 82 aa3.94□□□□□ -1.78
RTFDC1-209ENST00000487211 G0S2P27469 103 aa3.94□□□□□ -1.78
RTFDC1-209ENST00000487211 C5orf38Q86SI9 138 aa3.94□□□□□ -1.78
RTFDC1-209ENST00000487211 LINC00526Q96FQ7 95 aa3.94□□□□□ -1.78
RTFDC1-209ENST00000487211 SCGB3A1Q96QR1 104 aa3.94□□□□□ -1.78
RTFDC1-209ENST00000487211 TIMM17AQ99595 171 aa3.94□□□□□ -1.78
RTFDC1-209ENST00000487211 VCX2Q9H322 139 aa3.94□□□□□ -1.78
RTFDC1-209ENST00000487211 VPS13BQ7Z7G8 4022 aa3.93□□□□□ -1.78
RTFDC1-209ENST00000487211 UBE2D1P51668 147 aa3.93□□□□□ -1.78
RTFDC1-209ENST00000487211 PDZD11Q5EBL8 140 aa3.93□□□□□ -1.78
RTFDC1-209ENST00000487211 TEX43Q6ZNM6 134 aa3.93□□□□□ -1.78
RTFDC1-209ENST00000487211 GVQW2A0A096LPI5 108 aaPredicted RBP3.92□□□□□ -1.78
RTFDC1-209ENST00000487211 COX7A2LO14548 114 aa3.92□□□□□ -1.78
RTFDC1-209ENST00000487211 S100A1P23297 94 aa3.92□□□□□ -1.78
RTFDC1-209ENST00000487211 RAB5BP61020 215 aa3.92□□□□□ -1.78
RTFDC1-209ENST00000487211 Q6ZN92 141 aa3.92□□□□□ -1.78
RTFDC1-209ENST00000487211 SDIM1Q6ZPB5 146 aa3.92□□□□□ -1.78
RTFDC1-209ENST00000487211 FAM19A3Q7Z5A8 133 aa3.92□□□□□ -1.78
RTFDC1-209ENST00000487211 FAM19A2Q8N3H0 131 aa3.92□□□□□ -1.78
RTFDC1-209ENST00000487211 C9orf163Q8N9P6 203 aa3.92□□□□□ -1.78
RTFDC1-209ENST00000487211 CHCHD1Q96BP2 118 aaKnown RBP3.92□□□□□ -1.78
RTFDC1-209ENST00000487211 CST9LQ9H4G1 147 aa3.92□□□□□ -1.78
RTFDC1-209ENST00000487211 IGHV1-58A0A0C4DH39 117 aa3.91□□□□□ -1.78
RTFDC1-209ENST00000487211 A0A0J9YXV3 536 aa3.91□□□□□ -1.78
RTFDC1-209ENST00000487211 LINC01549A6NIU2 74 aa3.91□□□□□ -1.78
RTFDC1-209ENST00000487211 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.91□□□□□ -1.78
RTFDC1-209ENST00000487211 HBDP02042 147 aa3.91□□□□□ -1.78
RTFDC1-209ENST00000487211 CNBPP62633 177 aaKnown RBP3.91□□□□□ -1.78
RTFDC1-209ENST00000487211 HAMPP81172 84 aa3.91□□□□□ -1.78
RTFDC1-209ENST00000487211 PRR4Q16378 134 aa3.91□□□□□ -1.78
RTFDC1-209ENST00000487211 BAGE3Q86Y29 109 aa3.91□□□□□ -1.78
RTFDC1-209ENST00000487211 MTURNQ8N3F0 131 aa3.91□□□□□ -1.78
RTFDC1-209ENST00000487211 PKHD1L1Q86WI1 4243 aa3.91□□□□□ -1.78
RTFDC1-209ENST00000487211 IGLV4-69A0A075B6H9 119 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 IGHV3-64A0A075B6Q5 118 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 PANO1I0J062 215 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 HIST1H2BKO60814 126 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 SERF1AO75920 110 aa3.9□□□□□ -1.79
RTFDC1-209ENST00000487211 HIST1H2BJP06899 126 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms