RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 IBA57-AS1B1ANH7 110 aa4.15□□□□□ -1.75
VAMP3-203ENST00000487194 SMIM13P0DJ93 91 aa4.15□□□□□ -1.75
VAMP3-203ENST00000487194 IFITM1P13164 125 aa4.15□□□□□ -1.75
VAMP3-203ENST00000487194 FXYD2P54710 66 aa4.15□□□□□ -1.75
VAMP3-203ENST00000487194 CKS1BP61024 79 aa4.15□□□□□ -1.75
VAMP3-203ENST00000487194 RPL24P83731 157 aaKnown RBP4.15□□□□□ -1.75
VAMP3-203ENST00000487194 MEIG1Q5JSS6 88 aa4.15□□□□□ -1.75
VAMP3-203ENST00000487194 UBE2DNLQ8IWF7 75 aa4.15□□□□□ -1.75
VAMP3-203ENST00000487194 SPANXDQ9BXN6 97 aa4.15□□□□□ -1.75
VAMP3-203ENST00000487194 SPANXCQ9NY87 97 aa4.15□□□□□ -1.75
VAMP3-203ENST00000487194 LITAFQ99732 161 aa4.14□□□□□ -1.75
VAMP3-203ENST00000487194 COX11Q9Y6N1 276 aa4.14□□□□□ -1.75
VAMP3-203ENST00000487194 IGKV2D-24A0A075B6R9 120 aa4.13□□□□□ -1.75
VAMP3-203ENST00000487194 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.13□□□□□ -1.75
VAMP3-203ENST00000487194 A0A1B0GWB2 263 aa4.13□□□□□ -1.75
VAMP3-203ENST00000487194 F8WDY8 70 aa4.13□□□□□ -1.75
VAMP3-203ENST00000487194 SPAG11BQ08648 103 aa4.13□□□□□ -1.75
VAMP3-203ENST00000487194 KIAA0087Q14695 138 aa4.13□□□□□ -1.75
VAMP3-203ENST00000487194 MUSTN1Q8IVN3 82 aa4.13□□□□□ -1.75
VAMP3-203ENST00000487194 PPDPFQ9H3Y8 114 aa4.13□□□□□ -1.75
VAMP3-203ENST00000487194 NHP2Q9NX24 153 aaKnown RBP4.13□□□□□ -1.75
VAMP3-203ENST00000487194 ZNF561-AS1K7EIQ3 104 aa4.12□□□□□ -1.75
VAMP3-203ENST00000487194 TAX1BP3O14907 124 aa4.12□□□□□ -1.75
VAMP3-203ENST00000487194 COX17Q14061 63 aa4.12□□□□□ -1.75
VAMP3-203ENST00000487194 TTC32Q5I0X7 151 aa4.12□□□□□ -1.75
VAMP3-203ENST00000487194 ADAMTSL4-AS1Q5T5F5 129 aa4.12□□□□□ -1.75
VAMP3-203ENST00000487194 KRTAP26-1Q6PEX3 210 aa4.12□□□□□ -1.75
VAMP3-203ENST00000487194 MUC7Q8TAX7 377 aa4.12□□□□□ -1.75
VAMP3-203ENST00000487194 Q9HAA7 133 aa4.12□□□□□ -1.75
VAMP3-203ENST00000487194 ERG28Q9UKR5 140 aa4.12□□□□□ -1.75
VAMP3-203ENST00000487194 STARD9Q9P2P6 4700 aa4.12□□□□□ -1.75
VAMP3-203ENST00000487194 GVQW2A0A096LPI5 108 aaPredicted RBP4.11□□□□□ -1.75
VAMP3-203ENST00000487194 A0A0B4J2C4 111 aa4.11□□□□□ -1.75
VAMP3-203ENST00000487194 A0A1B0GV90 55 aa4.11□□□□□ -1.75
VAMP3-203ENST00000487194 A4D1N5 150 aa4.11□□□□□ -1.75
VAMP3-203ENST00000487194 C9orf118A6NHY6 69 aa4.11□□□□□ -1.75
VAMP3-203ENST00000487194 LINC00158P58513 81 aa4.11□□□□□ -1.75
VAMP3-203ENST00000487194 LINC00308Q8TCZ7 52 aa4.11□□□□□ -1.75
VAMP3-203ENST00000487194 NTN5Q8WTR8 489 aaPredicted RBP4.11□□□□□ -1.75
VAMP3-203ENST00000487194 C2orf48Q96LS8 159 aa4.11□□□□□ -1.75
VAMP3-203ENST00000487194 TRBV30A0A0K0K1B3 111 aa4.1□□□□□ -1.75
VAMP3-203ENST00000487194 A0A0U1RRA0 63 aa4.1□□□□□ -1.75
VAMP3-203ENST00000487194 PFN2P35080 140 aa4.1□□□□□ -1.75
VAMP3-203ENST00000487194 C2orf82Q6UX34 121 aa4.1□□□□□ -1.75
VAMP3-203ENST00000487194 MIR7-3HGQ8N6C7 128 aa4.1□□□□□ -1.75
VAMP3-203ENST00000487194 DAND5Q8N907 189 aa4.1□□□□□ -1.75
VAMP3-203ENST00000487194 RAB37Q96AX2 223 aa4.1□□□□□ -1.75
VAMP3-203ENST00000487194 WWC2-AS2Q96NR7 200 aa4.1□□□□□ -1.75
VAMP3-203ENST00000487194 PRO1854Q9UHT4 67 aa4.1□□□□□ -1.75
VAMP3-203ENST00000487194 CSMD3Q7Z407 3707 aa4.09□□□□□ -1.75
VAMP3-203ENST00000487194 K7ERJ3 54 aa4.09□□□□□ -1.75
VAMP3-203ENST00000487194 CFC1BP0CG36 223 aa4.09□□□□□ -1.75
VAMP3-203ENST00000487194 CFC1P0CG37 223 aa4.09□□□□□ -1.75
VAMP3-203ENST00000487194 NPC2P61916 151 aa4.09□□□□□ -1.75
VAMP3-203ENST00000487194 UNQ6190/PRO20217Q6UXQ8 127 aa4.09□□□□□ -1.75
VAMP3-203ENST00000487194 C15orf56Q8N910 161 aa4.09□□□□□ -1.75
VAMP3-203ENST00000487194 CAMK2N2Q96S95 79 aa4.09□□□□□ -1.75
VAMP3-203ENST00000487194 DNAH10Q8IVF4 4471 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 LOC107984156A0A0G2JMH3 177 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 NBDYA0A0U1RRE5 68 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 H3BUT2 72 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 FABP2P12104 132 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 VAMP3Q15836 100 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 RNF151Q2KHN1 245 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 HIGD2BQ4VC39 106 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 LYRM7Q5U5X0 104 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 ARL17AQ8IVW1 177 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 C6orf223Q8N319 242 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 PGPEP1Q9NXJ5 209 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 DNAH2Q9P225 4427 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 DNAH6Q9C0G6 4158 aa4.08□□□□□ -1.76
VAMP3-203ENST00000487194 RYR1P21817 5038 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 ALMS1Q8TCU4 4167 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 TRAV13-2A0A0B4J235 113 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 A0A1W2PPM0 123 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 USP17L23D6RBM5 183 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 PSCAO43653 123 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 SYCNQ0VAF6 134 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 C14orf177Q52M58 125 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 C10orf25Q5T742 122 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 SOSTDC1Q6X4U4 206 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 LINC00526Q96FQ7 95 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 SND1-IT1Q9HBX3 110 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 C6orf48Q9UBA6 75 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 PCLOQ9Y6V0 5065 aa4.07□□□□□ -1.76
VAMP3-203ENST00000487194 C3orf84H3BNL1 204 aa4.06□□□□□ -1.76
VAMP3-203ENST00000487194 EIF4EBP3O60516 100 aaPredicted RBP4.06□□□□□ -1.76
VAMP3-203ENST00000487194 NDUFC2O95298 119 aa4.06□□□□□ -1.76
VAMP3-203ENST00000487194 TSPAN13O95857 204 aa4.06□□□□□ -1.76
VAMP3-203ENST00000487194 Q1RN00 199 aa4.06□□□□□ -1.76
VAMP3-203ENST00000487194 C9orf116Q5BN46 136 aaPredicted RBP4.06□□□□□ -1.76
VAMP3-203ENST00000487194 Q6ZRU5 148 aa4.06□□□□□ -1.76
VAMP3-203ENST00000487194 GTF2H5Q6ZYL4 71 aa4.06□□□□□ -1.76
VAMP3-203ENST00000487194 LYSTQ99698 3801 aa4.06□□□□□ -1.76
VAMP3-203ENST00000487194 KRTAP1-5Q9BYS1 174 aa4.06□□□□□ -1.76
VAMP3-203ENST00000487194 DNAH17Q9UFH2 4485 aa4.06□□□□□ -1.76
VAMP3-203ENST00000487194 GAGE10A6NGK3 116 aa4.05□□□□□ -1.76
VAMP3-203ENST00000487194 NDUFC2-KCTD14E9PQ53 114 aa4.05□□□□□ -1.76
VAMP3-203ENST00000487194 COX6CP09669 75 aa4.05□□□□□ -1.76
VAMP3-203ENST00000487194 RPL13AP40429 203 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms