RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 NEBP20929 6669 aa8.1□□□□□ -1.11
U2AF1-211ENST00000486519 C9orf92A6NGG3 77 aa8.1□□□□□ -1.11
U2AF1-211ENST00000486519 C6orf226Q5I0X4 101 aa8.1□□□□□ -1.11
U2AF1-211ENST00000486519 Q8IZM0 81 aa8.1□□□□□ -1.11
U2AF1-211ENST00000486519 hCG_2014768A0A024R1R8 64 aa8.09□□□□□ -1.11
U2AF1-211ENST00000486519 IGLV4-3A0A075B6K6 122 aa8.09□□□□□ -1.11
U2AF1-211ENST00000486519 CFC1P0CG37 223 aa8.09□□□□□ -1.11
U2AF1-211ENST00000486519 KRTAP6-3Q3LI67 103 aa8.09□□□□□ -1.11
U2AF1-211ENST00000486519 LINC01561Q8N1V8 128 aa8.09□□□□□ -1.11
U2AF1-211ENST00000486519 NKAPP1Q8N9T2 125 aa8.09□□□□□ -1.11
U2AF1-211ENST00000486519 ALKBH7Q9BT30 221 aaPredicted RBP8.09□□□□□ -1.11
U2AF1-211ENST00000486519 F8VRH5 84 aa8.08□□□□□ -1.12
U2AF1-211ENST00000486519 TCAPO15273 167 aa8.08□□□□□ -1.12
U2AF1-211ENST00000486519 GIPP09681 153 aaPredicted RBP8.08□□□□□ -1.12
U2AF1-211ENST00000486519 ARPC5O15511 151 aa8.07□□□□□ -1.12
U2AF1-211ENST00000486519 GATCO43716 136 aaKnown RBP8.07□□□□□ -1.12
U2AF1-211ENST00000486519 UMAD1C9J7I0 102 aa8.06□□□□□ -1.12
U2AF1-211ENST00000486519 SLC25A20O43772 301 aa8.06□□□□□ -1.12
U2AF1-211ENST00000486519 Q6ZN92 141 aa8.06□□□□□ -1.12
U2AF1-211ENST00000486519 FAM19A2Q8N3H0 131 aa8.06□□□□□ -1.12
U2AF1-211ENST00000486519 A0A1B0GUT8 65 aa8.05□□□□□ -1.12
U2AF1-211ENST00000486519 MRPL51Q4U2R6 128 aaKnown RBP8.05□□□□□ -1.12
U2AF1-211ENST00000486519 Q8NDZ9 215 aa8.05□□□□□ -1.12
U2AF1-211ENST00000486519 HIGD1CA8MV81 97 aa8.04□□□□□ -1.12
U2AF1-211ENST00000486519 A8MWL6 223 aa8.04□□□□□ -1.12
U2AF1-211ENST00000486519 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
U2AF1-211ENST00000486519 GNB1LQ9BYB4 327 aa8.04□□□□□ -1.12
U2AF1-211ENST00000486519 PPP1R2P9O14990 202 aa8.03□□□□□ -1.12
U2AF1-211ENST00000486519 PDE6DO43924 150 aa8.03□□□□□ -1.12
U2AF1-211ENST00000486519 RAB5BP61020 215 aa8.03□□□□□ -1.12
U2AF1-211ENST00000486519 MOBPQ13875 183 aa8.03□□□□□ -1.12
U2AF1-211ENST00000486519 FAM231DQ6ZW35 169 aa8.02□□□□□ -1.13
U2AF1-211ENST00000486519 AKAP14Q86UN6 197 aa8.02□□□□□ -1.13
U2AF1-211ENST00000486519 BORCS7Q96B45 105 aa8.02□□□□□ -1.13
U2AF1-211ENST00000486519 SMIM2Q9BVW6 85 aa8.02□□□□□ -1.13
U2AF1-211ENST00000486519 VPREB1P12018 145 aa8.01□□□□□ -1.13
U2AF1-211ENST00000486519 TMEM141Q96I45 108 aa8.01□□□□□ -1.13
U2AF1-211ENST00000486519 EIF5A2Q9GZV4 153 aaKnown RBP8.01□□□□□ -1.13
U2AF1-211ENST00000486519 SMLR1H3BR10 107 aa8□□□□□ -1.13
U2AF1-211ENST00000486519 PPP1R17O96001 155 aa8□□□□□ -1.13
U2AF1-211ENST00000486519 IFI27P40305 119 aaPredicted RBP8□□□□□ -1.13
U2AF1-211ENST00000486519 C20orf78Q9BR46 151 aa8□□□□□ -1.13
U2AF1-211ENST00000486519 CDKN2A-AS1Q9UH64 79 aa8□□□□□ -1.13
U2AF1-211ENST00000486519 TRBV24-1A0A075B6N3 115 aa7.99□□□□□ -1.13
U2AF1-211ENST00000486519 IGLV9-49A0A0B4J1Y8 123 aa7.99□□□□□ -1.13
U2AF1-211ENST00000486519 MT2AP02795 61 aa7.99□□□□□ -1.13
U2AF1-211ENST00000486519 TEX43Q6ZNM6 134 aa7.99□□□□□ -1.13
U2AF1-211ENST00000486519 PYGO1Q9Y3Y4 419 aa7.99□□□□□ -1.13
U2AF1-211ENST00000486519 NPYP01303 97 aa7.97□□□□□ -1.13
U2AF1-211ENST00000486519 CT83Q5H943 113 aa7.97□□□□□ -1.13
U2AF1-211ENST00000486519 FAM104BQ5XKR9 115 aa7.97□□□□□ -1.13
U2AF1-211ENST00000486519 LINC00483Q53H64 154 aa7.96□□□□□ -1.14
U2AF1-211ENST00000486519 AMELXQ99217 191 aa7.96□□□□□ -1.14
U2AF1-211ENST00000486519 KRTAP9-3Q9BYQ3 159 aa7.96□□□□□ -1.14
U2AF1-211ENST00000486519 ZNF706Q9Y5V0 76 aaPredicted RBP7.96□□□□□ -1.14
U2AF1-211ENST00000486519 MT1FP04733 61 aa7.95□□□□□ -1.14
U2AF1-211ENST00000486519 Q6Q795 121 aa7.95□□□□□ -1.14
U2AF1-211ENST00000486519 TCTE3Q8IZS6 198 aa7.95□□□□□ -1.14
U2AF1-211ENST00000486519 SMCR5Q8TEV8 140 aa7.95□□□□□ -1.14
U2AF1-211ENST00000486519 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
U2AF1-211ENST00000486519 CKS2P33552 79 aa7.93□□□□□ -1.14
U2AF1-211ENST00000486519 CXCL5P42830 114 aa7.93□□□□□ -1.14
U2AF1-211ENST00000486519 RIGQ13278 110 aa7.93□□□□□ -1.14
U2AF1-211ENST00000486519 KRTAP19-6Q3LI70 58 aa7.93□□□□□ -1.14
U2AF1-211ENST00000486519 C2orf66Q6UXQ4 117 aa7.93□□□□□ -1.14
U2AF1-211ENST00000486519 FAM19A3Q7Z5A8 133 aa7.93□□□□□ -1.14
U2AF1-211ENST00000486519 C2orf88Q9BSF0 95 aa7.93□□□□□ -1.14
U2AF1-211ENST00000486519 D6R8Y8 96 aa7.92□□□□□ -1.14
U2AF1-211ENST00000486519 KRTAP20-1Q3LI63 56 aa7.92□□□□□ -1.14
U2AF1-211ENST00000486519 GAGE2AQ6NT46 116 aa7.92□□□□□ -1.14
U2AF1-211ENST00000486519 COX7B2Q8TF08 81 aa7.91□□□□□ -1.14
U2AF1-211ENST00000486519 GEMIN7Q9H840 131 aaKnown RBP7.91□□□□□ -1.14
U2AF1-211ENST00000486519 MUC12Q9UKN1 5478 aa7.9□□□□□ -1.14
U2AF1-211ENST00000486519 LINC00862A6NCI5 91 aa7.9□□□□□ -1.14
U2AF1-211ENST00000486519 IGLV6-57P01721 117 aa7.9□□□□□ -1.14
U2AF1-211ENST00000486519 RAB14P61106 215 aa7.9□□□□□ -1.14
U2AF1-211ENST00000486519 SSBP3-AS1Q7Z2R9 100 aa7.9□□□□□ -1.14
U2AF1-211ENST00000486519 SND1-IT1Q9HBX3 110 aa7.9□□□□□ -1.14
U2AF1-211ENST00000486519 HMSDA8MTL9 139 aa7.89□□□□□ -1.15
U2AF1-211ENST00000486519 PFN2P35080 140 aa7.89□□□□□ -1.15
U2AF1-211ENST00000486519 RPL37P61927 97 aaKnown RBP7.89□□□□□ -1.15
U2AF1-211ENST00000486519 VCX2Q9H322 139 aa7.89□□□□□ -1.15
U2AF1-211ENST00000486519 KANTRA0A1W2PQU2 76 aa7.88□□□□□ -1.15
U2AF1-211ENST00000486519 ERC2-IT1O76042 136 aa7.88□□□□□ -1.15
U2AF1-211ENST00000486519 ZNF345Q14585 488 aa7.88□□□□□ -1.15
U2AF1-211ENST00000486519 LINC01551Q86U37 167 aa7.88□□□□□ -1.15
U2AF1-211ENST00000486519 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
U2AF1-211ENST00000486519 V9GYV3 84 aa7.88□□□□□ -1.15
U2AF1-211ENST00000486519 HERVK_113P63121 156 aa7.86□□□□□ -1.15
U2AF1-211ENST00000486519 IGIPA6NJ69 53 aa7.85□□□□□ -1.15
U2AF1-211ENST00000486519 NPSP0C0P6 89 aa7.85□□□□□ -1.15
U2AF1-211ENST00000486519 RAB5AP20339 215 aa7.85□□□□□ -1.15
U2AF1-211ENST00000486519 LOC389332A0A1B0GUA5 103 aa7.84□□□□□ -1.15
U2AF1-211ENST00000486519 SPINK8P0C7L1 97 aa7.84□□□□□ -1.15
U2AF1-211ENST00000486519 CEBPGP53567 150 aa7.83□□□□□ -1.16
U2AF1-211ENST00000486519 PDZD11Q5EBL8 140 aa7.83□□□□□ -1.16
U2AF1-211ENST00000486519 OSTCQ9NRP0 149 aa7.83□□□□□ -1.16
U2AF1-211ENST00000486519 TEX46H3BTG2 121 aa7.82□□□□□ -1.16
U2AF1-211ENST00000486519 CYSLTR1Q9Y271 337 aa7.82□□□□□ -1.16
U2AF1-211ENST00000486519 CHTOPQ9Y3Y2 248 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms