RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 C18orf32Q8TCD1 76 aa3.59□□□□□ -1.83
CUX1-208ENST00000485792 RPS10P5Q9NQ39 176 aa3.59□□□□□ -1.83
CUX1-208ENST00000485792 A0A096LNI7 61 aa3.58□□□□□ -1.84
CUX1-208ENST00000485792 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.58□□□□□ -1.84
CUX1-208ENST00000485792 INAFM2P0DMQ5 153 aa3.58□□□□□ -1.84
CUX1-208ENST00000485792 SYCNQ0VAF6 134 aa3.58□□□□□ -1.84
CUX1-208ENST00000485792 Q6ZRU5 148 aa3.58□□□□□ -1.84
CUX1-208ENST00000485792 C5orf38Q86SI9 138 aa3.58□□□□□ -1.84
CUX1-208ENST00000485792 MRPL35Q9NZE8 188 aaKnown RBP3.58□□□□□ -1.84
CUX1-208ENST00000485792 IFITM10A6NMD0 228 aa3.57□□□□□ -1.84
CUX1-208ENST00000485792 KRTAP29-1A8MX34 341 aaPredicted RBP3.57□□□□□ -1.84
CUX1-208ENST00000485792 APOMO95445 188 aa3.57□□□□□ -1.84
CUX1-208ENST00000485792 FABP9Q0Z7S8 132 aa3.57□□□□□ -1.84
CUX1-208ENST00000485792 PDZD11Q5EBL8 140 aa3.57□□□□□ -1.84
CUX1-208ENST00000485792 C10orf25Q5T742 122 aa3.57□□□□□ -1.84
CUX1-208ENST00000485792 TEX43Q6ZNM6 134 aa3.57□□□□□ -1.84
CUX1-208ENST00000485792 CARD19Q96LW7 228 aa3.57□□□□□ -1.84
CUX1-208ENST00000485792 LINC00474Q9P2X8 69 aa3.57□□□□□ -1.84
CUX1-208ENST00000485792 A0A0J9YXV3 536 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 TINCRA0A1B0GVN0 87 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 LINC00614P0C842 121 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 MT1HL1P0DM35 61 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 SEC11AP67812 179 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 NDUFA5Q16718 116 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 PAPPA-AS1Q5QFB9 102 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 CBLN2Q8IUK8 224 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 SLC7A5P1Q8MH63 180 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 VCX2Q9H322 139 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 CST9LQ9H4G1 147 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 PKIGQ9Y2B9 76 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 TRAPPC1Q9Y5R8 145 aa3.56□□□□□ -1.84
CUX1-208ENST00000485792 TRBV30A0A0K0K1B3 111 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 LOC107984640A0A0U1RRK4 108 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 A0A1W2PNN7 141 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 COLCA2A8K830 154 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 HERVK_113P63121 156 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 SPAG11BQ08648 103 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 SRSF9Q13242 221 aaKnown RBP eCLIP3.55□□□□□ -1.84
CUX1-208ENST00000485792 UNQ6190/PRO20217Q6UXQ8 127 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 Q6ZN92 141 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 Q6ZRP5 223 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 Q8IZM0 81 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 ORAOV1Q8WV07 137 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 SCGB3A1Q96QR1 104 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 C6orf48Q9UBA6 75 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 CDKN2A-AS1Q9UH64 79 aa3.55□□□□□ -1.84
CUX1-208ENST00000485792 IGLV5-39A0A0G2JS06 123 aa3.54□□□□□ -1.84
CUX1-208ENST00000485792 SMIM1B2RUZ4 78 aa3.54□□□□□ -1.84
CUX1-208ENST00000485792 NDUFA1O15239 70 aa3.54□□□□□ -1.84
CUX1-208ENST00000485792 OXTP01178 125 aa3.54□□□□□ -1.84
CUX1-208ENST00000485792 IGLC3P0DOY3 106 aa3.54□□□□□ -1.84
CUX1-208ENST00000485792 PMVKQ15126 192 aa3.54□□□□□ -1.84
CUX1-208ENST00000485792 STPG4Q8N801 248 aa3.54□□□□□ -1.84
CUX1-208ENST00000485792 CAMK2N2Q96S95 79 aa3.54□□□□□ -1.84
CUX1-208ENST00000485792 C2orf88Q9BSF0 95 aa3.54□□□□□ -1.84
CUX1-208ENST00000485792 SMCO4Q9NRQ5 59 aa3.54□□□□□ -1.84
CUX1-208ENST00000485792 FAM168BA1KXE4 195 aa3.53□□□□□ -1.84
CUX1-208ENST00000485792 NDUFC2-KCTD14E9PQ53 114 aa3.53□□□□□ -1.84
CUX1-208ENST00000485792 HBDP02042 147 aa3.53□□□□□ -1.84
CUX1-208ENST00000485792 RPL37AP61513 92 aaKnown RBP3.53□□□□□ -1.84
CUX1-208ENST00000485792 PMCHL1Q16048 86 aa3.53□□□□□ -1.84
CUX1-208ENST00000485792 MAJINQ3KP22 176 aa3.53□□□□□ -1.84
CUX1-208ENST00000485792 C2orf82Q6UX34 121 aa3.53□□□□□ -1.84
CUX1-208ENST00000485792 FA2HQ7L5A8 372 aa3.53□□□□□ -1.84
CUX1-208ENST00000485792 Q8NDZ9 215 aa3.53□□□□□ -1.84
CUX1-208ENST00000485792 CHCHD1Q96BP2 118 aaKnown RBP3.53□□□□□ -1.84
CUX1-208ENST00000485792 LRP2P98164 4655 aa3.53□□□□□ -1.84
CUX1-208ENST00000485792 LPAP08519 4548 aa3.52□□□□□ -1.85
CUX1-208ENST00000485792 TRAV12-1A0A0B4J245 112 aa3.52□□□□□ -1.85
CUX1-208ENST00000485792 IGKV2-24A0A0C4DH68 120 aa3.52□□□□□ -1.85
CUX1-208ENST00000485792 PRYO14603 147 aa3.52□□□□□ -1.85
CUX1-208ENST00000485792 SCO1O75880 301 aa3.52□□□□□ -1.85
CUX1-208ENST00000485792 RAB5BP61020 215 aa3.52□□□□□ -1.85
CUX1-208ENST00000485792 PRR3P79522 188 aaKnown RBP3.52□□□□□ -1.85
CUX1-208ENST00000485792 C9orf116Q5BN46 136 aaPredicted RBP3.52□□□□□ -1.85
CUX1-208ENST00000485792 C9orf129Q5T035 196 aaKnown RBP3.52□□□□□ -1.85
CUX1-208ENST00000485792 F8VRH5 84 aa3.51□□□□□ -1.85
CUX1-208ENST00000485792 NUPR1O60356 82 aa3.51□□□□□ -1.85
CUX1-208ENST00000485792 ATP5LO75964 103 aa3.51□□□□□ -1.85
CUX1-208ENST00000485792 SCGB1D1O95968 90 aa3.51□□□□□ -1.85
CUX1-208ENST00000485792 TRGC2P03986 189 aa3.51□□□□□ -1.85
CUX1-208ENST00000485792 ZNF22P17026 224 aaPredicted RBP3.51□□□□□ -1.85
CUX1-208ENST00000485792 CXCL5P42830 114 aa3.51□□□□□ -1.85
CUX1-208ENST00000485792 C11orf86A6NJI1 115 aa3.5□□□□□ -1.85
CUX1-208ENST00000485792 GAGE2BQ13066 116 aa3.5□□□□□ -1.85
CUX1-208ENST00000485792 C6orf226Q5I0X4 101 aa3.5□□□□□ -1.85
CUX1-208ENST00000485792 C7orf33Q8WU49 177 aa3.5□□□□□ -1.85
CUX1-208ENST00000485792 ZNF625Q96I27 306 aaPredicted RBP3.5□□□□□ -1.85
CUX1-208ENST00000485792 GEMIN7Q9H840 131 aaKnown RBP3.5□□□□□ -1.85
CUX1-208ENST00000485792 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
CUX1-208ENST00000485792 IGLV5-37A0A075B6J1 123 aa3.49□□□□□ -1.85
CUX1-208ENST00000485792 KRTAP10-8P60410 259 aa3.49□□□□□ -1.85
CUX1-208ENST00000485792 SERTAD4-AS1Q5TG53 156 aa3.49□□□□□ -1.85
CUX1-208ENST00000485792 SPINK6Q6UWN8 80 aa3.49□□□□□ -1.85
CUX1-208ENST00000485792 LINC00469Q8N7U9 141 aa3.49□□□□□ -1.85
CUX1-208ENST00000485792 COX7B2Q8TF08 81 aa3.49□□□□□ -1.85
CUX1-208ENST00000485792 IFI27L1Q96BM0 104 aa3.49□□□□□ -1.85
CUX1-208ENST00000485792 DPH3Q96FX2 82 aa3.49□□□□□ -1.85
CUX1-208ENST00000485792 LINC01600Q96MT4 127 aa3.49□□□□□ -1.85
CUX1-208ENST00000485792 TP73-AS1Q9UF72 201 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms