RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 F8WDY8 70 aa6.03□□□□□ -1.44
SHROOM3-207ENST00000485780 KRTDAPP60985 99 aa6.03□□□□□ -1.44
SHROOM3-207ENST00000485780 KIAA0087Q14695 138 aa6.03□□□□□ -1.44
SHROOM3-207ENST00000485780 ODF1Q14990 250 aa6.03□□□□□ -1.44
SHROOM3-207ENST00000485780 HIGD2BQ4VC39 106 aa6.03□□□□□ -1.44
SHROOM3-207ENST00000485780 XP32Q5T750 250 aa6.03□□□□□ -1.44
SHROOM3-207ENST00000485780 C9orf163Q8N9P6 203 aa6.03□□□□□ -1.44
SHROOM3-207ENST00000485780 C2orf48Q96LS8 159 aa6.03□□□□□ -1.44
SHROOM3-207ENST00000485780 CHAC1Q9BUX1 264 aa6.03□□□□□ -1.44
SHROOM3-207ENST00000485780 PRO1933Q9H354 126 aa6.03□□□□□ -1.44
SHROOM3-207ENST00000485780 C11orf86A6NJI1 115 aa6.02□□□□□ -1.45
SHROOM3-207ENST00000485780 EPM2AB3EWF7 344 aa6.02□□□□□ -1.45
SHROOM3-207ENST00000485780 F8VRH5 84 aa6.02□□□□□ -1.45
SHROOM3-207ENST00000485780 ZNF22P17026 224 aaPredicted RBP6.02□□□□□ -1.45
SHROOM3-207ENST00000485780 SPAG11BQ08648 103 aa6.02□□□□□ -1.45
SHROOM3-207ENST00000485780 PET117Q6UWS5 81 aa6.02□□□□□ -1.45
SHROOM3-207ENST00000485780 Q6ZSA8 131 aa6.02□□□□□ -1.45
SHROOM3-207ENST00000485780 LINC00469Q8N7U9 141 aa6.02□□□□□ -1.45
SHROOM3-207ENST00000485780 ORAOV1Q8WV07 137 aa6.02□□□□□ -1.45
SHROOM3-207ENST00000485780 CHTOPQ9Y3Y2 248 aaKnown RBP6.02□□□□□ -1.45
SHROOM3-207ENST00000485780 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.01□□□□□ -1.45
SHROOM3-207ENST00000485780 IGLV5-39A0A0G2JS06 123 aa6.01□□□□□ -1.45
SHROOM3-207ENST00000485780 TMEM238LA0A1B0GVL6 79 aa6.01□□□□□ -1.45
SHROOM3-207ENST00000485780 SYS1-DBNDD2H3BUS1 97 aa6.01□□□□□ -1.45
SHROOM3-207ENST00000485780 ZNF561-AS1K7EIQ3 104 aa6.01□□□□□ -1.45
SHROOM3-207ENST00000485780 XGP55808 180 aa6.01□□□□□ -1.45
SHROOM3-207ENST00000485780 Q8IZM0 81 aa6.01□□□□□ -1.45
SHROOM3-207ENST00000485780 C14orf144Q96I85 54 aa6.01□□□□□ -1.45
SHROOM3-207ENST00000485780 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
SHROOM3-207ENST00000485780 MRPL35Q9NZE8 188 aaKnown RBP6.01□□□□□ -1.45
SHROOM3-207ENST00000485780 C20orf202A1L168 122 aa6□□□□□ -1.45
SHROOM3-207ENST00000485780 H3BRM9 83 aa6□□□□□ -1.45
SHROOM3-207ENST00000485780 LINC00526Q96FQ7 95 aa6□□□□□ -1.45
SHROOM3-207ENST00000485780 MIEN1Q9BRT3 115 aa6□□□□□ -1.45
SHROOM3-207ENST00000485780 HAMPP81172 84 aa5.99□□□□□ -1.45
SHROOM3-207ENST00000485780 SYCNQ0VAF6 134 aa5.99□□□□□ -1.45
SHROOM3-207ENST00000485780 RNF151Q2KHN1 245 aa5.99□□□□□ -1.45
SHROOM3-207ENST00000485780 Q5VSD8 79 aa5.99□□□□□ -1.45
SHROOM3-207ENST00000485780 LINC01545Q5VT33 79 aa5.99□□□□□ -1.45
SHROOM3-207ENST00000485780 SDIM1Q6ZPB5 146 aa5.99□□□□□ -1.45
SHROOM3-207ENST00000485780 Q6ZRU5 148 aa5.99□□□□□ -1.45
SHROOM3-207ENST00000485780 CARD19Q96LW7 228 aa5.99□□□□□ -1.45
SHROOM3-207ENST00000485780 VAMP8Q9BV40 100 aa5.99□□□□□ -1.45
SHROOM3-207ENST00000485780 MAP1LC3CQ9BXW4 147 aa5.99□□□□□ -1.45
SHROOM3-207ENST00000485780 TMEM223A0PJW6 202 aa5.98□□□□□ -1.45
SHROOM3-207ENST00000485780 FAM229AH3BQW9 127 aa5.98□□□□□ -1.45
SHROOM3-207ENST00000485780 SMR3BP02814 79 aaPredicted RBP5.98□□□□□ -1.45
SHROOM3-207ENST00000485780 PLNP26678 52 aa5.98□□□□□ -1.45
SHROOM3-207ENST00000485780 CXCL5P42830 114 aa5.98□□□□□ -1.45
SHROOM3-207ENST00000485780 CIRBPQ14011 172 aaKnown RBP5.98□□□□□ -1.45
SHROOM3-207ENST00000485780 LINC01620Q4KN68 170 aa5.98□□□□□ -1.45
SHROOM3-207ENST00000485780 CAMK2N2Q96S95 79 aa5.98□□□□□ -1.45
SHROOM3-207ENST00000485780 TRBV30A0A0K0K1B3 111 aa5.97□□□□□ -1.45
SHROOM3-207ENST00000485780 NDUFA1O15239 70 aa5.97□□□□□ -1.45
SHROOM3-207ENST00000485780 SPINK8P0C7L1 97 aa5.97□□□□□ -1.45
SHROOM3-207ENST00000485780 LBHQ53QV2 105 aaPredicted RBP5.97□□□□□ -1.45
SHROOM3-207ENST00000485780 TMEM170BQ5T4T1 132 aa5.97□□□□□ -1.45
SHROOM3-207ENST00000485780 C10orf25Q5T742 122 aa5.97□□□□□ -1.45
SHROOM3-207ENST00000485780 COX7B2Q8TF08 81 aa5.97□□□□□ -1.45
SHROOM3-207ENST00000485780 PKIGQ9Y2B9 76 aa5.97□□□□□ -1.45
SHROOM3-207ENST00000485780 PAM16Q9Y3D7 125 aa5.97□□□□□ -1.45
SHROOM3-207ENST00000485780 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.96□□□□□ -1.46
SHROOM3-207ENST00000485780 H0Y8G0 127 aa5.96□□□□□ -1.46
SHROOM3-207ENST00000485780 DPM2O94777 84 aa5.96□□□□□ -1.46
SHROOM3-207ENST00000485780 PRSS2P07478 247 aa5.96□□□□□ -1.46
SHROOM3-207ENST00000485780 TLX1NBP0CAT3 122 aa5.96□□□□□ -1.46
SHROOM3-207ENST00000485780 INAFM2P0DMQ5 153 aa5.96□□□□□ -1.46
SHROOM3-207ENST00000485780 SPATA45Q537H7 98 aa5.96□□□□□ -1.46
SHROOM3-207ENST00000485780 UNQ6190/PRO20217Q6UXQ8 127 aa5.96□□□□□ -1.46
SHROOM3-207ENST00000485780 FAM30AQ9NZY2 134 aa5.96□□□□□ -1.46
SHROOM3-207ENST00000485780 C6orf48Q9UBA6 75 aa5.96□□□□□ -1.46
SHROOM3-207ENST00000485780 IGKCP01834 107 aa5.95□□□□□ -1.46
SHROOM3-207ENST00000485780 MAJINQ3KP22 176 aa5.95□□□□□ -1.46
SHROOM3-207ENST00000485780 C6orf226Q5I0X4 101 aa5.95□□□□□ -1.46
SHROOM3-207ENST00000485780 C2orf82Q6UX34 121 aa5.95□□□□□ -1.46
SHROOM3-207ENST00000485780 TOMM7Q9P0U1 55 aa5.95□□□□□ -1.46
SHROOM3-207ENST00000485780 UQCR10Q9UDW1 63 aa5.95□□□□□ -1.46
SHROOM3-207ENST00000485780 PANO1I0J062 215 aa5.94□□□□□ -1.46
SHROOM3-207ENST00000485780 SMCPP49901 116 aaPredicted RBP5.94□□□□□ -1.46
SHROOM3-207ENST00000485780 SVIPQ8NHG7 77 aa5.94□□□□□ -1.46
SHROOM3-207ENST00000485780 SPACA4Q8TDM5 124 aa5.94□□□□□ -1.46
SHROOM3-207ENST00000485780 ZNF625Q96I27 306 aaPredicted RBP5.94□□□□□ -1.46
SHROOM3-207ENST00000485780 PMCHL2Q9BQD1 86 aa5.94□□□□□ -1.46
SHROOM3-207ENST00000485780 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.94□□□□□ -1.46
SHROOM3-207ENST00000485780 A0A096LNI7 61 aa5.93□□□□□ -1.46
SHROOM3-207ENST00000485780 LOC107984640A0A0U1RRK4 108 aa5.93□□□□□ -1.46
SHROOM3-207ENST00000485780 CKS1BP61024 79 aa5.93□□□□□ -1.46
SHROOM3-207ENST00000485780 SFTA2Q6UW10 78 aa5.93□□□□□ -1.46
SHROOM3-207ENST00000485780 ATOH7Q8N100 152 aa5.93□□□□□ -1.46
SHROOM3-207ENST00000485780 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
SHROOM3-207ENST00000485780 M0R143 59 aa5.92□□□□□ -1.46
SHROOM3-207ENST00000485780 PTTG1IPP53801 180 aa5.92□□□□□ -1.46
SHROOM3-207ENST00000485780 SCXQ7RTU7 201 aa5.92□□□□□ -1.46
SHROOM3-207ENST00000485780 SNHG12Q9BXW3 62 aa5.92□□□□□ -1.46
SHROOM3-207ENST00000485780 LINC00474Q9P2X8 69 aa5.92□□□□□ -1.46
SHROOM3-207ENST00000485780 MYCBP2O75592 4640 aa5.92□□□□□ -1.46
SHROOM3-207ENST00000485780 SRRM2Q9UQ35 2752 aaKnown RBP5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 E9PLD3 99 aa5.91□□□□□ -1.46
SHROOM3-207ENST00000485780 NDUFC2-KCTD14E9PQ53 114 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms