RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 IGKV2-29A2NJV5 120 aaPredicted RBP1.31□□□□□ -2.2
RC3H1-205ENST00000484867 INE1O15225 51 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 IGKV2D-40P01614 121 aaPredicted RBP1.31□□□□□ -2.2
RC3H1-205ENST00000484867 PRH1P02810 166 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 S100A3P33764 101 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 RPL37AP61513 92 aaKnown RBP1.31□□□□□ -2.2
RC3H1-205ENST00000484867 FXYD3Q14802 87 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 FAM74A4Q5TZK3 123 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 C5orf56Q8N8D9 126 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 LINC00208Q96KT6 92 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 WFDC6Q9BQY6 131 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 V9GYV3 84 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 UBR1Q8IWV7 1749 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 FMN2Q9NZ56 1722 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 RGPD8O14715 1765 aaPredicted RBP1.31□□□□□ -2.2
RC3H1-205ENST00000484867 RGPD5Q99666 1765 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 MRC1P22897 1456 aa1.31□□□□□ -2.2
RC3H1-205ENST00000484867 ASXL1Q8IXJ9 1541 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 KIAA0586Q9BVV6 1533 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 MAP3K4Q9Y6R4 1608 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 ABCA4P78363 2273 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 LAMB2P55268 1798 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 LOC110117498A0A087WWA1 95 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 M0R2N4 97 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 ZNF137PP52743 207 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 GDF5OSQ5U4N7 250 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 LINC00322Q6ZN03 302 aaPredicted RBP1.3□□□□□ -2.2
RC3H1-205ENST00000484867 ZNF625Q96I27 306 aaPredicted RBP1.3□□□□□ -2.2
RC3H1-205ENST00000484867 GNG13Q9P2W3 67 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 SNURFQ9Y675 71 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 SIP14410 1827 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 EHBP1L1Q8N3D4 1523 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 SAMD9Q5K651 1589 aa1.3□□□□□ -2.2
RC3H1-205ENST00000484867 LAMA4Q16363 1823 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 CR1P17927 2039 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 A0A087WVE0 104 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 CTXND1A0A1B0GTU2 59 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 UQCR11O14957 56 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 IFI27P40305 119 aaPredicted RBP1.29□□□□□ -2.2
RC3H1-205ENST00000484867 KRTAP12-1P59990 96 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 Q96NJ1 140 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 SPRR4Q96PI1 79 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 PLAC8Q9NZF1 115 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 PRRC2BQ5JSZ5 2229 aaKnown RBP1.29□□□□□ -2.2
RC3H1-205ENST00000484867 C1orf167Q5SNV9 1468 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 MROH2BQ7Z745 1585 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 MYO3AQ8NEV4 1616 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 LOC285556D6RIA3 1793 aa1.29□□□□□ -2.2
RC3H1-205ENST00000484867 COL14A1Q05707 1796 aaKnown RBP1.29□□□□□ -2.2
RC3H1-205ENST00000484867 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.28□□□□□ -2.2
RC3H1-205ENST00000484867 SMIM4Q8WVI0 70 aa1.28□□□□□ -2.2
RC3H1-205ENST00000484867 LINC00846Q9NV44 126 aa1.28□□□□□ -2.2
RC3H1-205ENST00000484867 ATP7BP35670 1465 aa1.28□□□□□ -2.2
RC3H1-205ENST00000484867 KIF21BO75037 1637 aa1.28□□□□□ -2.2
RC3H1-205ENST00000484867 PHRF1Q9P1Y6 1649 aaKnown RBP1.28□□□□□ -2.2
RC3H1-205ENST00000484867 C5P01031 1676 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 DEPDC5O75140 1603 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 ALKQ9UM73 1620 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 TRGV1A0A0A0MS02 117 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 TRBV7-4A0A0J9YYF1 115 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 SPINK4O60575 86 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 HMGA1P17096 107 aaKnown RBP1.27□□□□□ -2.21
RC3H1-205ENST00000484867 FCER1GP30273 86 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 SPINK7P58062 85 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 SPATA8Q6RVD6 105 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 UNQ6190/PRO20217Q6UXQ8 127 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 LINC00472Q9H8W2 130 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 CMC2Q9NRP2 79 aa1.27□□□□□ -2.21
RC3H1-205ENST00000484867 TJP1Q07157 1748 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 IQGAP1P46940 1657 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 ALS2Q96Q42 1657 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 ARHGEF5Q12774 1597 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 TIAM1Q13009 1591 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 NWD1Q149M9 1564 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 TRPM2O94759 1503 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 MED12Q93074 2177 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 LINC01549A6NIU2 74 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 MGPP08493 103 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 IFI6P09912 130 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 ATP5EP2Q5VTU8 51 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 NMES1Q9C002 83 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 TIMM8BQ9Y5J9 83 aaPredicted RBP1.26□□□□□ -2.21
RC3H1-205ENST00000484867 FAM208AQ9UK61 1670 aaKnown RBP1.26□□□□□ -2.21
RC3H1-205ENST00000484867 LRRC37A3O60309 1634 aa1.26□□□□□ -2.21
RC3H1-205ENST00000484867 ADGRB2O60241 1585 aa1.25□□□□□ -2.21
RC3H1-205ENST00000484867 CEP170BQ9Y4F5 1589 aaPredicted RBP1.25□□□□□ -2.21
RC3H1-205ENST00000484867 CD163L1Q9NR16 1453 aa1.25□□□□□ -2.21
RC3H1-205ENST00000484867 ABRACLQ9P1F3 81 aa1.25□□□□□ -2.21
RC3H1-205ENST00000484867 NRXN2Q9P2S2 1712 aa1.25□□□□□ -2.21
RC3H1-205ENST00000484867 MYOM1P52179 1685 aa1.25□□□□□ -2.21
RC3H1-205ENST00000484867 PLCH1Q4KWH8 1693 aa1.25□□□□□ -2.21
RC3H1-205ENST00000484867 GCC2Q8IWJ2 1684 aa1.25□□□□□ -2.21
RC3H1-205ENST00000484867 CPS1P31327 1500 aa1.25□□□□□ -2.21
RC3H1-205ENST00000484867 TNCP24821 2201 aa1.24□□□□□ -2.21
RC3H1-205ENST00000484867 MED13LQ71F56 2210 aa1.24□□□□□ -2.21
RC3H1-205ENST00000484867 DLEC1Q9Y238 1755 aa1.24□□□□□ -2.21
RC3H1-205ENST00000484867 E9PCH4 1651 aa1.24□□□□□ -2.21
RC3H1-205ENST00000484867 TRAV1-2A0A0B4J238 106 aa1.24□□□□□ -2.21
RC3H1-205ENST00000484867 ATXN8Q156A1 80 aa1.24□□□□□ -2.21
RC3H1-205ENST00000484867 CCL19Q99731 98 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms