RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 PGPEP1Q9NXJ5 209 aa4.17□□□□□ -1.74
NCL-209ENST00000484328 PKHD1P08F94 4074 aa4.16□□□□□ -1.74
NCL-209ENST00000484328 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.16□□□□□ -1.74
NCL-209ENST00000484328 C20orf202A1L168 122 aa4.16□□□□□ -1.74
NCL-209ENST00000484328 ZNF561-AS1K7EIQ3 104 aa4.16□□□□□ -1.74
NCL-209ENST00000484328 CXCL5P42830 114 aa4.16□□□□□ -1.74
NCL-209ENST00000484328 AKR1D1P51857 326 aa4.16□□□□□ -1.74
NCL-209ENST00000484328 C9orf163Q8N9P6 203 aa4.16□□□□□ -1.74
NCL-209ENST00000484328 COX7B2Q8TF08 81 aa4.16□□□□□ -1.74
NCL-209ENST00000484328 LINC00526Q96FQ7 95 aa4.16□□□□□ -1.74
NCL-209ENST00000484328 DNAH5Q8TE73 4624 aa4.15□□□□□ -1.74
NCL-209ENST00000484328 IGLV5-52A0A0A0MRZ9 124 aa4.15□□□□□ -1.75
NCL-209ENST00000484328 E9PLD3 99 aa4.15□□□□□ -1.75
NCL-209ENST00000484328 SYCNQ0VAF6 134 aa4.15□□□□□ -1.75
NCL-209ENST00000484328 SFTA2Q6UW10 78 aa4.15□□□□□ -1.75
NCL-209ENST00000484328 Q6ZRU5 148 aa4.15□□□□□ -1.75
NCL-209ENST00000484328 CARD19Q96LW7 228 aa4.15□□□□□ -1.75
NCL-209ENST00000484328 CAMK2N2Q96S95 79 aa4.15□□□□□ -1.75
NCL-209ENST00000484328 EPPK1P58107 5090 aaKnown RBP4.15□□□□□ -1.75
NCL-209ENST00000484328 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.14□□□□□ -1.75
NCL-209ENST00000484328 TRBV30A0A0K0K1B3 111 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 NDUFA1O15239 70 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 LEPROTO15243 131 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 PRSS2P07478 247 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 FUSP35637 526 aaKnown RBP eCLIP4.14□□□□□ -1.75
NCL-209ENST00000484328 TSPEAR-AS2P59090 65 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 HERVK_113P61574 105 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 RNF151Q2KHN1 245 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 C10orf25Q5T742 122 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 C2orf82Q6UX34 121 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 Q6ZSA8 131 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 ZNF625Q96I27 306 aaPredicted RBP4.14□□□□□ -1.75
NCL-209ENST00000484328 TOMM7Q9P0U1 55 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 C6orf48Q9UBA6 75 aa4.14□□□□□ -1.75
NCL-209ENST00000484328 TLX1NBP0CAT3 122 aa4.13□□□□□ -1.75
NCL-209ENST00000484328 GCSHP23434 173 aa4.13□□□□□ -1.75
NCL-209ENST00000484328 CKS1BP61024 79 aa4.13□□□□□ -1.75
NCL-209ENST00000484328 CIRBPQ14011 172 aaKnown RBP4.13□□□□□ -1.75
NCL-209ENST00000484328 JOSD1Q15040 202 aaPredicted RBP4.13□□□□□ -1.75
NCL-209ENST00000484328 C4orf48Q5BLP8 95 aa4.13□□□□□ -1.75
NCL-209ENST00000484328 C6orf226Q5I0X4 101 aa4.13□□□□□ -1.75
NCL-209ENST00000484328 UNQ6190/PRO20217Q6UXQ8 127 aa4.13□□□□□ -1.75
NCL-209ENST00000484328 SDIM1Q6ZPB5 146 aa4.13□□□□□ -1.75
NCL-209ENST00000484328 ATOH7Q8N100 152 aa4.13□□□□□ -1.75
NCL-209ENST00000484328 STPG4Q8N801 248 aa4.13□□□□□ -1.75
NCL-209ENST00000484328 PLEKHB2Q96CS7 222 aa4.13□□□□□ -1.75
NCL-209ENST00000484328 DYNC1H1Q14204 4646 aaKnown RBP4.13□□□□□ -1.75
NCL-209ENST00000484328 IGKV2D-26A0A0A0MRZ7 120 aa4.12□□□□□ -1.75
NCL-209ENST00000484328 C16orf90A8MZG2 172 aa4.12□□□□□ -1.75
NCL-209ENST00000484328 J3QQQ9 107 aa4.12□□□□□ -1.75
NCL-209ENST00000484328 NMUP48645 174 aa4.12□□□□□ -1.75
NCL-209ENST00000484328 KRTAP10-1P60331 282 aa4.12□□□□□ -1.75
NCL-209ENST00000484328 MAJINQ3KP22 176 aa4.12□□□□□ -1.75
NCL-209ENST00000484328 LINC01620Q4KN68 170 aa4.12□□□□□ -1.75
NCL-209ENST00000484328 ANKRD39Q53RE8 183 aa4.12□□□□□ -1.75
NCL-209ENST00000484328 PYY3Q5JQD4 70 aa4.12□□□□□ -1.75
NCL-209ENST00000484328 PKIGQ9Y2B9 76 aa4.12□□□□□ -1.75
NCL-209ENST00000484328 A0A096LNI7 61 aa4.11□□□□□ -1.75
NCL-209ENST00000484328 LOC107984640A0A0U1RRK4 108 aa4.11□□□□□ -1.75
NCL-209ENST00000484328 NDUFC2-KCTD14E9PQ53 114 aa4.11□□□□□ -1.75
NCL-209ENST00000484328 SCGB1D1O95968 90 aa4.11□□□□□ -1.75
NCL-209ENST00000484328 HERV-K104P63124 156 aa4.11□□□□□ -1.75
NCL-209ENST00000484328 SPACA4Q8TDM5 124 aa4.11□□□□□ -1.75
NCL-209ENST00000484328 NDUFA12Q9UI09 145 aa4.11□□□□□ -1.75
NCL-209ENST00000484328 MYMXA0A1B0GTQ4 84 aa4.1□□□□□ -1.75
NCL-209ENST00000484328 PANO1I0J062 215 aa4.1□□□□□ -1.75
NCL-209ENST00000484328 LGALS3P17931 250 aaKnown RBP4.1□□□□□ -1.75
NCL-209ENST00000484328 PTTG1IPP53801 180 aa4.1□□□□□ -1.75
NCL-209ENST00000484328 COX17Q14061 63 aa4.1□□□□□ -1.75
NCL-209ENST00000484328 C9orf116Q5BN46 136 aaPredicted RBP4.1□□□□□ -1.75
NCL-209ENST00000484328 Q6ZRP5 223 aa4.1□□□□□ -1.75
NCL-209ENST00000484328 ERG28Q9UKR5 140 aa4.1□□□□□ -1.75
NCL-209ENST00000484328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.1□□□□□ -1.75
NCL-209ENST00000484328 LRP1BQ9NZR2 4599 aa4.1□□□□□ -1.75
NCL-209ENST00000484328 LOC105371267A0A1B0GV96 52 aa4.09□□□□□ -1.75
NCL-209ENST00000484328 EPM2AB3EWF7 344 aa4.09□□□□□ -1.75
NCL-209ENST00000484328 HSBP1L1C9JCN9 74 aa4.09□□□□□ -1.75
NCL-209ENST00000484328 CDK2AP2O75956 126 aa4.09□□□□□ -1.75
NCL-209ENST00000484328 CHTF8P0CG12 524 aa4.09□□□□□ -1.75
NCL-209ENST00000484328 KRTAP19-1Q8IUB9 90 aa4.09□□□□□ -1.75
NCL-209ENST00000484328 FAM30AQ9NZY2 134 aa4.09□□□□□ -1.75
NCL-209ENST00000484328 LINC00474Q9P2X8 69 aa4.09□□□□□ -1.75
NCL-209ENST00000484328 APOBP04114 4563 aaKnown RBP4.08□□□□□ -1.76
NCL-209ENST00000484328 A0A0J9YXY3 114 aa4.08□□□□□ -1.76
NCL-209ENST00000484328 ZNF815PA8K554 130 aa4.08□□□□□ -1.76
NCL-209ENST00000484328 TIMM17BO60830 172 aa4.08□□□□□ -1.76
NCL-209ENST00000484328 SMIM6P0DI80 62 aa4.08□□□□□ -1.76
NCL-209ENST00000484328 PCP2Q8IVA1 136 aa4.08□□□□□ -1.76
NCL-209ENST00000484328 LITAFQ99732 161 aa4.08□□□□□ -1.76
NCL-209ENST00000484328 VAMP8Q9BV40 100 aa4.08□□□□□ -1.76
NCL-209ENST00000484328 TTTY13Q9BZ97 58 aa4.08□□□□□ -1.76
NCL-209ENST00000484328 PLAC8Q9NZF1 115 aa4.08□□□□□ -1.76
NCL-209ENST00000484328 BIRC6Q9NR09 4857 aa4.07□□□□□ -1.76
NCL-209ENST00000484328 LINC00587B1AMM8 73 aa4.07□□□□□ -1.76
NCL-209ENST00000484328 XGP55808 180 aa4.07□□□□□ -1.76
NCL-209ENST00000484328 RPL18AQ02543 176 aaKnown RBP4.07□□□□□ -1.76
NCL-209ENST00000484328 C9orf129Q5T035 196 aaKnown RBP4.07□□□□□ -1.76
NCL-209ENST00000484328 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
NCL-209ENST00000484328 SCXQ7RTU7 201 aa4.07□□□□□ -1.76
NCL-209ENST00000484328 KRTAP7-1Q8IUC3 87 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 472.3 ms