RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 GEMIN7Q9H840 131 aaKnown RBP7.99□□□□□ -1.13
HDAC1-209ENST00000484305 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
HDAC1-209ENST00000484305 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
HDAC1-209ENST00000484305 TRAPPC1Q9Y5R8 145 aa7.99□□□□□ -1.13
HDAC1-209ENST00000484305 LINC01549A6NIU2 74 aa7.98□□□□□ -1.13
HDAC1-209ENST00000484305 PRSS2P07478 247 aa7.98□□□□□ -1.13
HDAC1-209ENST00000484305 Q8IZM0 81 aa7.98□□□□□ -1.13
HDAC1-209ENST00000484305 SVBPQ8N300 66 aa7.98□□□□□ -1.13
HDAC1-209ENST00000484305 SMCO4Q9NRQ5 59 aa7.98□□□□□ -1.13
HDAC1-209ENST00000484305 NDUFA5Q16718 116 aa7.97□□□□□ -1.13
HDAC1-209ENST00000484305 C6orf226Q5I0X4 101 aa7.97□□□□□ -1.13
HDAC1-209ENST00000484305 C18orf32Q8TCD1 76 aa7.97□□□□□ -1.13
HDAC1-209ENST00000484305 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
HDAC1-209ENST00000484305 PACRGQ96M98 296 aaPredicted RBP7.97□□□□□ -1.13
HDAC1-209ENST00000484305 CST9LQ9H4G1 147 aa7.97□□□□□ -1.13
HDAC1-209ENST00000484305 A0A096LNJ9 63 aa7.96□□□□□ -1.14
HDAC1-209ENST00000484305 TINCRA0A1B0GVN0 87 aa7.96□□□□□ -1.14
HDAC1-209ENST00000484305 NDUFC2-KCTD14E9PQ53 114 aa7.96□□□□□ -1.14
HDAC1-209ENST00000484305 CKS1BP61024 79 aa7.96□□□□□ -1.14
HDAC1-209ENST00000484305 SRSF9Q13242 221 aaKnown RBP eCLIP7.96□□□□□ -1.14
HDAC1-209ENST00000484305 KRTAP7-1Q8IUC3 87 aa7.96□□□□□ -1.14
HDAC1-209ENST00000484305 LINC00469Q8N7U9 141 aa7.96□□□□□ -1.14
HDAC1-209ENST00000484305 PSORS1C2Q9UIG4 136 aa7.96□□□□□ -1.14
HDAC1-209ENST00000484305 PMVKQ15126 192 aa7.95□□□□□ -1.14
HDAC1-209ENST00000484305 C9orf129Q5T035 196 aaKnown RBP7.95□□□□□ -1.14
HDAC1-209ENST00000484305 SERTAD4-AS1Q5TG53 156 aa7.95□□□□□ -1.14
HDAC1-209ENST00000484305 SPINK6Q6UWN8 80 aa7.95□□□□□ -1.14
HDAC1-209ENST00000484305 FAM19A5Q7Z5A7 132 aaPredicted RBP7.95□□□□□ -1.14
HDAC1-209ENST00000484305 IGLV5-45A0A087WSX0 123 aa7.94□□□□□ -1.14
HDAC1-209ENST00000484305 SMIM1B2RUZ4 78 aa7.94□□□□□ -1.14
HDAC1-209ENST00000484305 LINC00614P0C842 121 aa7.94□□□□□ -1.14
HDAC1-209ENST00000484305 KRTAP11-1Q8IUC1 163 aa7.94□□□□□ -1.14
HDAC1-209ENST00000484305 YPEL4Q96NS1 127 aa7.94□□□□□ -1.14
HDAC1-209ENST00000484305 PMCHL1Q16048 86 aa7.93□□□□□ -1.14
HDAC1-209ENST00000484305 PDZD11Q5EBL8 140 aa7.93□□□□□ -1.14
HDAC1-209ENST00000484305 LINC01600Q96MT4 127 aa7.93□□□□□ -1.14
HDAC1-209ENST00000484305 F8VRH5 84 aa7.92□□□□□ -1.14
HDAC1-209ENST00000484305 C1orf137Q5JT78 98 aa7.92□□□□□ -1.14
HDAC1-209ENST00000484305 M0QXV9 152 aa7.91□□□□□ -1.14
HDAC1-209ENST00000484305 SPINK8P0C7L1 97 aa7.91□□□□□ -1.14
HDAC1-209ENST00000484305 COX7B2Q8TF08 81 aa7.91□□□□□ -1.14
HDAC1-209ENST00000484305 HBDP02042 147 aa7.9□□□□□ -1.14
HDAC1-209ENST00000484305 CXCL5P42830 114 aa7.9□□□□□ -1.14
HDAC1-209ENST00000484305 NDUFA6P56556 154 aa7.9□□□□□ -1.14
HDAC1-209ENST00000484305 REG3GQ6UW15 175 aa7.9□□□□□ -1.14
HDAC1-209ENST00000484305 XAGE1AQ9HD64 81 aa7.9□□□□□ -1.14
HDAC1-209ENST00000484305 IGLC3P0DOY3 106 aa7.89□□□□□ -1.15
HDAC1-209ENST00000484305 RAB5BP61020 215 aa7.89□□□□□ -1.15
HDAC1-209ENST00000484305 IGLV7-43P04211 117 aa7.88□□□□□ -1.15
HDAC1-209ENST00000484305 CBLN2Q8IUK8 224 aa7.88□□□□□ -1.15
HDAC1-209ENST00000484305 TNXBP22105 4242 aa7.88□□□□□ -1.15
HDAC1-209ENST00000484305 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
HDAC1-209ENST00000484305 H3BRM9 83 aa7.87□□□□□ -1.15
HDAC1-209ENST00000484305 UBE2BP63146 152 aa7.87□□□□□ -1.15
HDAC1-209ENST00000484305 ODF1Q14990 250 aa7.87□□□□□ -1.15
HDAC1-209ENST00000484305 PLA2G2DQ9UNK4 145 aa7.87□□□□□ -1.15
HDAC1-209ENST00000484305 ATP5LO75964 103 aa7.86□□□□□ -1.15
HDAC1-209ENST00000484305 ZNF22P17026 224 aaPredicted RBP7.86□□□□□ -1.15
HDAC1-209ENST00000484305 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
HDAC1-209ENST00000484305 BAGE3Q86Y29 109 aa7.86□□□□□ -1.15
HDAC1-209ENST00000484305 SLC7A5P1Q8MH63 180 aa7.86□□□□□ -1.15
HDAC1-209ENST00000484305 C22orf24Q9Y442 160 aa7.86□□□□□ -1.15
HDAC1-209ENST00000484305 IGLV5-39A0A0G2JS06 123 aa7.85□□□□□ -1.15
HDAC1-209ENST00000484305 C11orf86A6NJI1 115 aa7.84□□□□□ -1.15
HDAC1-209ENST00000484305 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
HDAC1-209ENST00000484305 DIRC1Q969H9 104 aa7.83□□□□□ -1.16
HDAC1-209ENST00000484305 TRGC2P03986 189 aa7.82□□□□□ -1.16
HDAC1-209ENST00000484305 TMEM170BQ5T4T1 132 aa7.82□□□□□ -1.16
HDAC1-209ENST00000484305 CHTOPQ9Y3Y2 248 aaKnown RBP7.82□□□□□ -1.16
HDAC1-209ENST00000484305 H0Y9J4 135 aa7.81□□□□□ -1.16
HDAC1-209ENST00000484305 PFN2P35080 140 aa7.81□□□□□ -1.16
HDAC1-209ENST00000484305 LBHQ53QV2 105 aaPredicted RBP7.81□□□□□ -1.16
HDAC1-209ENST00000484305 MRPL55Q7Z7F7 128 aaKnown RBP7.81□□□□□ -1.16
HDAC1-209ENST00000484305 FAM19A2Q8N3H0 131 aa7.81□□□□□ -1.16
HDAC1-209ENST00000484305 IFI27L1Q96BM0 104 aa7.81□□□□□ -1.16
HDAC1-209ENST00000484305 TP73-AS1Q9UF72 201 aa7.81□□□□□ -1.16
HDAC1-209ENST00000484305 TRAV12-1A0A0B4J245 112 aa7.79□□□□□ -1.16
HDAC1-209ENST00000484305 HSBP1O75506 76 aa7.79□□□□□ -1.16
HDAC1-209ENST00000484305 ZNF625Q96I27 306 aaPredicted RBP7.79□□□□□ -1.16
HDAC1-209ENST00000484305 LINC00167Q96N53 147 aa7.79□□□□□ -1.16
HDAC1-209ENST00000484305 RPL37AP8A6NKH3 93 aa7.78□□□□□ -1.16
HDAC1-209ENST00000484305 NUPR1O60356 82 aa7.78□□□□□ -1.16
HDAC1-209ENST00000484305 PRR26Q8N8Z3 221 aa7.78□□□□□ -1.16
HDAC1-209ENST00000484305 ERG28Q9UKR5 140 aa7.78□□□□□ -1.16
HDAC1-209ENST00000484305 IGLV5-37A0A075B6J1 123 aa7.77□□□□□ -1.17
HDAC1-209ENST00000484305 TMEM223A0PJW6 202 aa7.77□□□□□ -1.17
HDAC1-209ENST00000484305 GAGE10A6NGK3 116 aa7.77□□□□□ -1.17
HDAC1-209ENST00000484305 COLCA2A8K830 154 aa7.77□□□□□ -1.17
HDAC1-209ENST00000484305 ZNF861PO60384 105 aa7.77□□□□□ -1.17
HDAC1-209ENST00000484305 KRTAP1-4P0C5Y4 121 aa7.77□□□□□ -1.17
HDAC1-209ENST00000484305 LINC00310P59036 64 aa7.77□□□□□ -1.17
HDAC1-209ENST00000484305 SND1-IT1Q9HBX3 110 aa7.77□□□□□ -1.17
HDAC1-209ENST00000484305 SERF1AO75920 110 aa7.76□□□□□ -1.17
HDAC1-209ENST00000484305 COX17Q14061 63 aa7.76□□□□□ -1.17
HDAC1-209ENST00000484305 NKAPP1Q8N9T2 125 aa7.76□□□□□ -1.17
HDAC1-209ENST00000484305 SCO1O75880 301 aa7.75□□□□□ -1.17
HDAC1-209ENST00000484305 H0Y8G0 127 aa7.74□□□□□ -1.17
HDAC1-209ENST00000484305 BCE1O60756 84 aa7.74□□□□□ -1.17
HDAC1-209ENST00000484305 SFTA2Q6UW10 78 aa7.74□□□□□ -1.17
HDAC1-209ENST00000484305 LEPROTL1O95214 131 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms