RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PRRC2CQ9Y520 2896 aaKnown RBP-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 AKAP13Q12802 2813 aa-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 K7EQZ3 153 aa-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 SFT2D2O95562 160 aa-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 MGPP08493 103 aa-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 DEFB123Q8N688 67 aa-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 MYOZ3Q8TDC0 251 aa-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 TSLPQ969D9 159 aa-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 APC2O95996 2303 aa-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 NSD3Q9BZ95 1437 aa-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 POLA1P09884 1462 aaPredicted RBP-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 ANKRD11Q6UB99 2663 aaPredicted RBP-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 ITPR1Q14643 2758 aa-0.24□□□□□ -2.45
SCAF11-207ENST00000484275 SRCAPQ6ZRS2 3230 aa-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 PKHD1P08F94 4074 aa-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 ITPR3Q14573 2671 aa-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 SPRR2BP35325 72 aa-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 ATP5EP56381 51 aaPredicted RBP-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 KRTAP20-2Q3LI61 65 aa-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 MRPL54Q6P161 138 aaKnown RBP-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 FAIMQ9NVQ4 179 aa-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 UQCR10Q9UDW1 63 aa-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 MAPKBP1O60336 1514 aa-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 SHPRHQ149N8 1683 aa-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 MARF1Q9Y4F3 1742 aaKnown RBP-0.25□□□□□ -2.45
SCAF11-207ENST00000484275 PKHD1L1Q86WI1 4243 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 NBEAQ8NFP9 2946 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 NIPBLQ6KC79 2804 aaeCLIP-0.26□□□□□ -2.452e-6■■■■■ 44.5
SCAF11-207ENST00000484275 CEP295Q9C0D2 2601 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 RGPD2P0DJD1 1756 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 SETBP1Q9Y6X0 1596 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 TRBV7-4A0A0J9YYF1 115 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 UBE2L5PA0A1B0GUS4 154 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 AKAIN1P0CW23 69 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 SPRR1BP22528 89 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 UBE2L3P68036 154 aaKnown RBP-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 WHAMMP3Q1A5X7 153 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 TMEM263Q8WUH6 116 aaKnown RBP-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 PP6455Q8WZ26 134 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 NXT2Q9NPJ8 142 aaKnown RBP-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 CDC42SE2Q9NRR3 84 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 CSMD1Q96PZ7 3565 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 MUC17Q685J3 4493 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 PKD1L2Q7Z442 2459 aa-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 URB1O60287 2271 aaKnown RBP-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 GOLGA4Q13439 2230 aaKnown RBP-0.26□□□□□ -2.45
SCAF11-207ENST00000484275 TACC2O95359 2948 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 MON2Q7Z3U7 1717 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 TARBP1Q13395 1621 aaKnown RBP-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 SACSQ9NZJ4 4579 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 LRRK2Q5S007 2527 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 IQSEC2Q5JU85 1478 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 C1orf167Q5SNV9 1468 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 LOC100130705A0A1B0GUX0 176 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 CHKB-CPT1BH3BT56 60 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 MT4P47944 62 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 C9orf153Q5TBE3 101 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 FAM167A-AS1Q96KT0 104 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 SPRR4Q96PI1 79 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 KIF20BQ96Q89 1820 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 MTORP42345 2549 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 TLN2Q9Y4G6 2542 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 WDFY4Q6ZS81 3184 aa-0.27□□□□□ -2.45
SCAF11-207ENST00000484275 ARHGAP5Q13017 1502 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 FAM135AQ9P2D6 1515 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 ITPR2Q14571 2701 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 UNC80Q8N2C7 3258 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 DNAH2Q9P225 4427 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 SCAPERQ9BY12 1400 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 TLN1Q9Y490 2541 aaKnown RBP-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 ROCK2O75116 1388 aaKnown RBP-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 SVEP1Q4LDE5 3571 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 TRANK1O15050 2925 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 OOSP1A8MZH6 123 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 LOC730098B7Z3J9 87 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 SPINK4O60575 86 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 C10orf113Q5VZT2 155 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 FAM223AQ8IWN6 122 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 LINC00474Q9P2X8 69 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 DCHS1Q96JQ0 3298 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 DNAJC13O75165 2243 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 LRRC37AA6NMS7 1700 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 CSMD2Q7Z408 3487 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 TRRAPQ9Y4A5 3859 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 CCDC168Q8NDH2 2452 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 DNAH3Q8TD57 4116 aa-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 SMG1Q96Q15 3661 aaKnown RBP-0.28□□□□□ -2.45
SCAF11-207ENST00000484275 ADGRL2O95490 1459 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 PLECQ15149 4684 aaKnown RBP-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 DMXL2Q8TDJ6 3036 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 CMYA5Q8N3K9 4069 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 SPENQ96T58 3664 aaKnown RBP-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 ANK3Q12955 4377 aaKnown RBP-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 C5P01031 1676 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 FAM24AA6NFZ4 105 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 F6UZH7 168 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 COX6CP09669 75 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 IGLC1P0CG04 106 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 PRO1933Q9H354 126 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 GCN1Q92616 2671 aaKnown RBP-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms