RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 C1orf137Q5JT78 98 aa3.64□□□□□ -1.83
SEMA3D-204ENST00000484038 A0A087X002 238 aa3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 LOC107984640A0A0U1RRK4 108 aa3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 F2Z2F3 143 aa3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 GATCO43716 136 aaKnown RBP3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 NUPR1O60356 82 aa3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 IGLC6P0CF74 106 aa3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 FGF6P10767 208 aa3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 ADAMTSL4-AS1Q5T5F5 129 aa3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 MRPL54Q6P161 138 aaKnown RBP3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 OR2D3Q8NGH3 330 aa3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 BTF3L4Q96K17 158 aa3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 PACRGQ96M98 296 aaPredicted RBP3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 OSTCQ9NRP0 149 aa3.63□□□□□ -1.83
SEMA3D-204ENST00000484038 TRAV9-1A0A075B6T8 112 aa3.62□□□□□ -1.83
SEMA3D-204ENST00000484038 A0A1W2PNN7 141 aa3.62□□□□□ -1.83
SEMA3D-204ENST00000484038 APCSP02743 223 aa3.62□□□□□ -1.83
SEMA3D-204ENST00000484038 NTF3P20783 257 aa3.62□□□□□ -1.83
SEMA3D-204ENST00000484038 RPS20P60866 119 aaKnown RBP3.62□□□□□ -1.83
SEMA3D-204ENST00000484038 RPL18AQ02543 176 aaKnown RBP3.62□□□□□ -1.83
SEMA3D-204ENST00000484038 COA6Q5JTJ3 125 aaKnown RBP3.62□□□□□ -1.83
SEMA3D-204ENST00000484038 TMEM136Q6ZRR5 245 aa3.62□□□□□ -1.83
SEMA3D-204ENST00000484038 OR5A1Q8NGJ0 315 aa3.62□□□□□ -1.83
SEMA3D-204ENST00000484038 DIRC1Q969H9 104 aa3.62□□□□□ -1.83
SEMA3D-204ENST00000484038 LINC00959A0A1B0GUT2 108 aa3.61□□□□□ -1.83
SEMA3D-204ENST00000484038 SMIM27A0A1W2PRY6 76 aa3.61□□□□□ -1.83
SEMA3D-204ENST00000484038 C9orf116Q5BN46 136 aaPredicted RBP3.61□□□□□ -1.83
SEMA3D-204ENST00000484038 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
SEMA3D-204ENST00000484038 LYZL1Q6UWQ5 148 aa3.61□□□□□ -1.83
SEMA3D-204ENST00000484038 PHF5AQ7RTV0 110 aaKnown RBP3.61□□□□□ -1.83
SEMA3D-204ENST00000484038 GATD1Q8NB37 220 aa3.61□□□□□ -1.83
SEMA3D-204ENST00000484038 RPL39LQ96EH5 51 aaKnown RBP3.61□□□□□ -1.83
SEMA3D-204ENST00000484038 TMEM101Q96IK0 257 aa3.61□□□□□ -1.83
SEMA3D-204ENST00000484038 PRO1933Q9H354 126 aa3.61□□□□□ -1.83
SEMA3D-204ENST00000484038 IGLV4-69A0A075B6H9 119 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 H0Y8G0 127 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 H0Y9J4 135 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 H7C423 109 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 SERF1AO75920 110 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 APOMO95445 188 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 NCR2O95944 276 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 IGLV7-43P04211 117 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 ZNF25P17030 456 aaPredicted RBP3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 UBE2D1P51668 147 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 SS18Q15532 418 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 FAM231DQ6ZW35 169 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 CAMK2N2Q96S95 79 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 GNB1LQ9BYB4 327 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 NAT8BQ9UHF3 227 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 FAT4Q6V0I7 4981 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 IGLV1-50A0A075B6I6 118 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 A0A087WZ39 114 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 A4D1N5 150 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 C19orf71A6NCJ1 209 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 HIGD1CA8MV81 97 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 JOSD1Q15040 202 aaPredicted RBP3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 CD164L2Q6UWJ8 174 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 BAGE3Q86Y29 109 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 NUP35Q8NFH5 326 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 TSKUQ8WUA8 353 aa3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 RPP21Q9H633 154 aaKnown RBP3.6□□□□□ -1.83
SEMA3D-204ENST00000484038 IGLV7-46A0A075B6I9 117 aa3.59□□□□□ -1.84
SEMA3D-204ENST00000484038 SDHAF1A6NFY7 115 aa3.59□□□□□ -1.84
SEMA3D-204ENST00000484038 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.59□□□□□ -1.84
SEMA3D-204ENST00000484038 COX7A2LO14548 114 aa3.59□□□□□ -1.84
SEMA3D-204ENST00000484038 PMCHP20382 165 aa3.59□□□□□ -1.84
SEMA3D-204ENST00000484038 CTRLP40313 264 aa3.59□□□□□ -1.84
SEMA3D-204ENST00000484038 PET117Q6UWS5 81 aa3.59□□□□□ -1.84
SEMA3D-204ENST00000484038 MRAP2Q96G30 205 aa3.59□□□□□ -1.84
SEMA3D-204ENST00000484038 A0A1B0GXF2 115 aa3.58□□□□□ -1.84
SEMA3D-204ENST00000484038 I3L3M4 83 aa3.58□□□□□ -1.84
SEMA3D-204ENST00000484038 RPL13AP40429 203 aaKnown RBP3.58□□□□□ -1.84
SEMA3D-204ENST00000484038 FOXA3P55318 350 aaPredicted RBP3.58□□□□□ -1.84
SEMA3D-204ENST00000484038 SMIM15Q7Z3B0 74 aa3.58□□□□□ -1.84
SEMA3D-204ENST00000484038 FAM19A5Q7Z5A7 132 aaPredicted RBP3.58□□□□□ -1.84
SEMA3D-204ENST00000484038 SMIM12Q96EX1 92 aa3.58□□□□□ -1.84
SEMA3D-204ENST00000484038 FAM168BA1KXE4 195 aa3.57□□□□□ -1.84
SEMA3D-204ENST00000484038 A8MWL6 223 aa3.57□□□□□ -1.84
SEMA3D-204ENST00000484038 TSPAN13O95857 204 aa3.57□□□□□ -1.84
SEMA3D-204ENST00000484038 KRTAP1-4P0C5Y4 121 aa3.57□□□□□ -1.84
SEMA3D-204ENST00000484038 SPAG11BQ08648 103 aa3.57□□□□□ -1.84
SEMA3D-204ENST00000484038 COX19Q49B96 90 aa3.57□□□□□ -1.84
SEMA3D-204ENST00000484038 RNASE13Q5GAN3 156 aaKnown RBP3.57□□□□□ -1.84
SEMA3D-204ENST00000484038 KRTAP11-1Q8IUC1 163 aa3.57□□□□□ -1.84
SEMA3D-204ENST00000484038 FAM19A2Q8N3H0 131 aa3.57□□□□□ -1.84
SEMA3D-204ENST00000484038 CNFNQ9BYD5 112 aa3.57□□□□□ -1.84
SEMA3D-204ENST00000484038 CDC42SE2Q9NRR3 84 aa3.57□□□□□ -1.84
SEMA3D-204ENST00000484038 TRAV13-1A0A0B4J241 112 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 TSTD3H0UI37 97 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 ESDP10768 282 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 RAB4AP20338 218 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 DDTP30046 118 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 KRTDAPP60985 99 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 UBE2BP63146 152 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 HBBP68871 147 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 ATP5L2Q7Z4Y8 100 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 C5orf38Q86SI9 138 aa3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 MRPL52Q86TS9 123 aaKnown RBP3.56□□□□□ -1.84
SEMA3D-204ENST00000484038 C18orf32Q8TCD1 76 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms