RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 NOTCH3Q9UM47 2321 aa12.68□□□□□ -0.38
SSR4-209ENST00000482902 USP17L23D6RBM5 183 aa12.67□□□□□ -0.38
SSR4-209ENST00000482902 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
SSR4-209ENST00000482902 CUBNO60494 3623 aa12.67□□□□□ -0.38
SSR4-209ENST00000482902 TRBV6-4A0A1B0GX49 114 aa12.67□□□□□ -0.38
SSR4-209ENST00000482902 PLA2G2AP14555 144 aa12.67□□□□□ -0.38
SSR4-209ENST00000482902 TRGV4A0A0C4DH28 118 aa12.66□□□□□ -0.38
SSR4-209ENST00000482902 IGLV1-51P01701 117 aa12.66□□□□□ -0.38
SSR4-209ENST00000482902 CCDC168Q8NDH2 2452 aa12.66□□□□□ -0.38
SSR4-209ENST00000482902 C2CD3Q4AC94 2353 aa12.66□□□□□ -0.38
SSR4-209ENST00000482902 NBPF19A0A087WUL8 3843 aa12.66□□□□□ -0.38
SSR4-209ENST00000482902 CSNK1G2-AS1Q8NCQ2 148 aa12.65□□□□□ -0.38
SSR4-209ENST00000482902 DSCR8Q96T75 97 aa12.65□□□□□ -0.38
SSR4-209ENST00000482902 C16orf95Q9H693 158 aa12.64□□□□□ -0.39
SSR4-209ENST00000482902 H0YGX0 51 aa12.64□□□□□ -0.39
SSR4-209ENST00000482902 NCR3O14931 201 aa12.64□□□□□ -0.39
SSR4-209ENST00000482902 JMJD1CQ15652 2540 aa12.63□□□□□ -0.39
SSR4-209ENST00000482902 IGKV3OR2-268A0A0C4DH90 116 aa12.63□□□□□ -0.39
SSR4-209ENST00000482902 LECT2O14960 151 aa12.63□□□□□ -0.39
SSR4-209ENST00000482902 WIPF1O43516 503 aa12.63□□□□□ -0.39
SSR4-209ENST00000482902 RNASE1P07998 156 aaKnown RBP12.63□□□□□ -0.39
SSR4-209ENST00000482902 FLNAP21333 2647 aaKnown RBP12.63□□□□□ -0.39
SSR4-209ENST00000482902 SETD2Q9BYW2 2564 aaPredicted RBP12.63□□□□□ -0.39
SSR4-209ENST00000482902 KRTAP1-1Q07627 177 aa12.62□□□□□ -0.39
SSR4-209ENST00000482902 COX7B2Q8TF08 81 aa12.62□□□□□ -0.39
SSR4-209ENST00000482902 CCL18P55774 89 aa12.62□□□□□ -0.39
SSR4-209ENST00000482902 SETXQ7Z333 2677 aaKnown RBP12.62□□□□□ -0.39
SSR4-209ENST00000482902 NIPBLQ6KC79 2804 aaeCLIP12.61□□□□□ -0.39
SSR4-209ENST00000482902 FHL2Q14192 279 aa12.61□□□□□ -0.39
SSR4-209ENST00000482902 TOMM7Q9P0U1 55 aa12.61□□□□□ -0.39
SSR4-209ENST00000482902 IGLV4-60A0A075B6I1 120 aa12.6□□□□□ -0.39
SSR4-209ENST00000482902 SS18Q15532 418 aa12.6□□□□□ -0.39
SSR4-209ENST00000482902 TRBV6-8A0A0A6YYG3 113 aa12.6□□□□□ -0.39
SSR4-209ENST00000482902 SLPIP03973 132 aa12.59□□□□□ -0.39
SSR4-209ENST00000482902 LINC00158P58513 81 aa12.59□□□□□ -0.39
SSR4-209ENST00000482902 Q5XG85 94 aa12.57□□□□□ -0.4
SSR4-209ENST00000482902 CCKP06307 115 aa12.56□□□□□ -0.4
SSR4-209ENST00000482902 HILS1P60008 231 aa12.56□□□□□ -0.4
SSR4-209ENST00000482902 C4orf26Q17RF5 130 aa12.56□□□□□ -0.4
SSR4-209ENST00000482902 IGHV3OR16-9A0A0B4J2B5 98 aa12.55□□□□□ -0.4
SSR4-209ENST00000482902 DEFB130BP0DP73 79 aa12.55□□□□□ -0.4
SSR4-209ENST00000482902 DEFB130AP0DP74 79 aa12.55□□□□□ -0.4
SSR4-209ENST00000482902 ORMDL1Q9P0S3 153 aa12.54□□□□□ -0.4
SSR4-209ENST00000482902 IBA57-AS1B1ANH7 110 aa12.53□□□□□ -0.4
SSR4-209ENST00000482902 ACANP16112 2415 aa12.53□□□□□ -0.4
SSR4-209ENST00000482902 LY6G6DO95868 133 aa12.53□□□□□ -0.4
SSR4-209ENST00000482902 ANK3Q12955 4377 aaKnown RBP12.53□□□□□ -0.4
SSR4-209ENST00000482902 A0A087WZ39 114 aa12.52□□□□□ -0.41
SSR4-209ENST00000482902 PAX4O43316 350 aa12.52□□□□□ -0.41
SSR4-209ENST00000482902 GHRHP01286 108 aa12.51□□□□□ -0.41
SSR4-209ENST00000482902 PFN2P35080 140 aa12.51□□□□□ -0.41
SSR4-209ENST00000482902 WFDC9Q8NEX5 89 aa12.51□□□□□ -0.41
SSR4-209ENST00000482902 MTORP42345 2549 aa12.51□□□□□ -0.41
SSR4-209ENST00000482902 ATP5EP2Q5VTU8 51 aa12.5□□□□□ -0.41
SSR4-209ENST00000482902 HRCT1Q6UXD1 115 aa12.5□□□□□ -0.41
SSR4-209ENST00000482902 LINC00167Q96N53 147 aa12.5□□□□□ -0.41
SSR4-209ENST00000482902 LINC00959A0A1B0GUT2 108 aa12.49□□□□□ -0.41
SSR4-209ENST00000482902 NDUFC2-KCTD14E9PQ53 114 aa12.49□□□□□ -0.41
SSR4-209ENST00000482902 S100A7L2Q5SY68 101 aa12.49□□□□□ -0.41
SSR4-209ENST00000482902 TRAV23DV6A0A075B6W5 121 aa12.49□□□□□ -0.41
SSR4-209ENST00000482902 NDUFC2O95298 119 aa12.49□□□□□ -0.41
SSR4-209ENST00000482902 GYPEP15421 78 aa12.49□□□□□ -0.41
SSR4-209ENST00000482902 FAM19A1Q7Z5A9 133 aa12.49□□□□□ -0.41
SSR4-209ENST00000482902 LYPD5Q6UWN5 251 aa12.48□□□□□ -0.41
SSR4-209ENST00000482902 PDZD2O15018 2839 aa12.47□□□□□ -0.41
SSR4-209ENST00000482902 LINC00612Q8N6U2 182 aa12.47□□□□□ -0.41
SSR4-209ENST00000482902 KRTAP10-3P60369 221 aa12.46□□□□□ -0.41
SSR4-209ENST00000482902 C11orf68Q9H3H3 251 aaKnown RBP12.46□□□□□ -0.41
SSR4-209ENST00000482902 JMJD7-PLA2G4BH0Y9G9 81 aa12.46□□□□□ -0.42
SSR4-209ENST00000482902 ENHOQ6UWT2 76 aa12.46□□□□□ -0.42
SSR4-209ENST00000482902 XCL1P47992 114 aa12.45□□□□□ -0.42
SSR4-209ENST00000482902 C6orf226Q5I0X4 101 aa12.45□□□□□ -0.42
SSR4-209ENST00000482902 TENM4Q6N022 2769 aa12.45□□□□□ -0.42
SSR4-209ENST00000482902 NANOS2P60321 138 aaKnown RBP12.43□□□□□ -0.42
SSR4-209ENST00000482902 X6R8D5 127 aa12.43□□□□□ -0.42
SSR4-209ENST00000482902 A0A096LPF7 62 aa12.43□□□□□ -0.42
SSR4-209ENST00000482902 CLPSL2Q6UWE3 100 aa12.43□□□□□ -0.42
SSR4-209ENST00000482902 C20orf197Q8N268 126 aa12.43□□□□□ -0.42
SSR4-209ENST00000482902 Q8N814 137 aa12.43□□□□□ -0.42
SSR4-209ENST00000482902 LINC00482Q8N8I6 264 aa12.43□□□□□ -0.42
SSR4-209ENST00000482902 TRBV10-3A0A0K0K1G6 114 aa12.41□□□□□ -0.42
SSR4-209ENST00000482902 A0A1B0GUV1 79 aa12.41□□□□□ -0.42
SSR4-209ENST00000482902 PRO0255Q9UI72 69 aa12.41□□□□□ -0.42
SSR4-209ENST00000482902 SMR3AQ99954 134 aa12.41□□□□□ -0.42
SSR4-209ENST00000482902 FN1P02751 2386 aaKnown RBP12.4□□□□□ -0.42
SSR4-209ENST00000482902 FAM236DA0A1B0GTK5 79 aa12.4□□□□□ -0.42
SSR4-209ENST00000482902 TMEM256-PLSCR3K7ERE1 68 aa12.4□□□□□ -0.42
SSR4-209ENST00000482902 FAM236CP0DP71 79 aa12.4□□□□□ -0.42
SSR4-209ENST00000482902 EPM2AB3EWF7 344 aa12.39□□□□□ -0.43
SSR4-209ENST00000482902 Q8IZM0 81 aa12.38□□□□□ -0.43
SSR4-209ENST00000482902 UBL5Q9BZL1 73 aa12.38□□□□□ -0.43
SSR4-209ENST00000482902 PRR3P79522 188 aaKnown RBP12.38□□□□□ -0.43
SSR4-209ENST00000482902 H7BZZ5 65 aa12.37□□□□□ -0.43
SSR4-209ENST00000482902 ITPR2Q14571 2701 aa12.36□□□□□ -0.43
SSR4-209ENST00000482902 DEFB4AO15263 64 aa12.35□□□□□ -0.43
SSR4-209ENST00000482902 LINC00269Q8N2A0 174 aa12.35□□□□□ -0.43
SSR4-209ENST00000482902 SPATA3Q8NHX4 192 aa12.35□□□□□ -0.43
SSR4-209ENST00000482902 LYRM9A8MSI8 78 aa12.34□□□□□ -0.43
SSR4-209ENST00000482902 TRAV7A0A075B6U4 112 aa12.33□□□□□ -0.43
SSR4-209ENST00000482902 SERP1Q9Y6X1 66 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms