RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 MAST4O15021 2626 aa8.85□□□□□ -0.99
CCDC78-213ENST00000482878 IGLV5-45A0A087WSX0 123 aa8.85□□□□□ -0.99
CCDC78-213ENST00000482878 A0A087WYN8 130 aa8.85□□□□□ -0.99
CCDC78-213ENST00000482878 LECT2O14960 151 aa8.85□□□□□ -0.99
CCDC78-213ENST00000482878 FSHBP01225 129 aa8.85□□□□□ -0.99
CCDC78-213ENST00000482878 STHQ8IWL8 128 aa8.84□□□□□ -0.99
CCDC78-213ENST00000482878 RNASE1P07998 156 aaKnown RBP8.84□□□□□ -0.99
CCDC78-213ENST00000482878 NDUFC2O95298 119 aa8.84□□□□□ -1
CCDC78-213ENST00000482878 TOMM7Q9P0U1 55 aa8.84□□□□□ -1
CCDC78-213ENST00000482878 TRGV1A0A0A0MS02 117 aa8.83□□□□□ -1
CCDC78-213ENST00000482878 INSP01308 110 aa8.83□□□□□ -1
CCDC78-213ENST00000482878 TRAV13-2A0A0B4J235 113 aa8.83□□□□□ -1
CCDC78-213ENST00000482878 A0A0U1RQV1 116 aa8.83□□□□□ -1
CCDC78-213ENST00000482878 LINC00242Q5T6M2 205 aa8.83□□□□□ -1
CCDC78-213ENST00000482878 WFDC10AQ9H1F0 79 aa8.83□□□□□ -1
CCDC78-213ENST00000482878 DEFB114Q30KQ6 69 aa8.82□□□□□ -1
CCDC78-213ENST00000482878 ENHOQ6UWT2 76 aa8.82□□□□□ -1
CCDC78-213ENST00000482878 IGLV5-39A0A0G2JS06 123 aa8.82□□□□□ -1
CCDC78-213ENST00000482878 RPL28P46779 137 aaKnown RBP8.82□□□□□ -1
CCDC78-213ENST00000482878 FAM19A1Q7Z5A9 133 aa8.82□□□□□ -1
CCDC78-213ENST00000482878 RPL36AP83881 106 aaKnown RBP8.81□□□□□ -1
CCDC78-213ENST00000482878 RPL36ALQ969Q0 106 aaKnown RBP8.81□□□□□ -1
CCDC78-213ENST00000482878 C4orf3Q8WVX3 66 aa8.81□□□□□ -1
CCDC78-213ENST00000482878 OVOL2Q9BRP0 275 aa8.81□□□□□ -1
CCDC78-213ENST00000482878 SND1-IT1Q9HBX3 110 aa8.81□□□□□ -1
CCDC78-213ENST00000482878 NBEAL1Q6ZS30 2694 aa8.81□□□□□ -1
CCDC78-213ENST00000482878 DNAJC9-AS1A6NH13 148 aa8.8□□□□□ -1
CCDC78-213ENST00000482878 LINC00158P58513 81 aa8.8□□□□□ -1
CCDC78-213ENST00000482878 C1orf158Q8N1D5 194 aa8.8□□□□□ -1
CCDC78-213ENST00000482878 BRK1Q8WUW1 75 aa8.8□□□□□ -1
CCDC78-213ENST00000482878 SMIM1B2RUZ4 78 aa8.79□□□□□ -1
CCDC78-213ENST00000482878 XCL1P47992 114 aa8.79□□□□□ -1
CCDC78-213ENST00000482878 ODF3L2Q3SX64 289 aa8.79□□□□□ -1
CCDC78-213ENST00000482878 NTM-AS1Q6ZSK4 140 aa8.79□□□□□ -1
CCDC78-213ENST00000482878 SMIM11BQ8TCY0 68 aa8.79□□□□□ -1
CCDC78-213ENST00000482878 PF4P02776 101 aa8.79□□□□□ -1
CCDC78-213ENST00000482878 MIR7-3HGQ8N6C7 128 aa8.79□□□□□ -1
CCDC78-213ENST00000482878 ZNF469Q96JG9 3925 aaPredicted RBP8.79□□□□□ -1
CCDC78-213ENST00000482878 NOTCH1P46531 2555 aa8.79□□□□□ -1
CCDC78-213ENST00000482878 AKAP9Q99996 3911 aa8.79□□□□□ -1
CCDC78-213ENST00000482878 TRGV2A0A075B6R0 118 aa8.78□□□□□ -1
CCDC78-213ENST00000482878 CCL24O00175 119 aa8.78□□□□□ -1
CCDC78-213ENST00000482878 LINC00337Q8N6G1 96 aa8.78□□□□□ -1
CCDC78-213ENST00000482878 J3QKU1 62 aa8.78□□□□□ -1
CCDC78-213ENST00000482878 S100A7L2Q5SY68 101 aa8.78□□□□□ -1
CCDC78-213ENST00000482878 SNURFQ9Y675 71 aa8.78□□□□□ -1
CCDC78-213ENST00000482878 RBM3P98179 157 aaKnown RBP8.78□□□□□ -1
CCDC78-213ENST00000482878 SERP1Q9Y6X1 66 aa8.78□□□□□ -1
CCDC78-213ENST00000482878 PAX4O43316 350 aa8.77□□□□□ -1.01
CCDC78-213ENST00000482878 Q6ZTI0 123 aa8.77□□□□□ -1.01
CCDC78-213ENST00000482878 IL17DQ8TAD2 202 aa8.77□□□□□ -1.01
CCDC78-213ENST00000482878 NDUFC2-KCTD14E9PQ53 114 aa8.77□□□□□ -1.01
CCDC78-213ENST00000482878 FAM19A3Q7Z5A8 133 aa8.77□□□□□ -1.01
CCDC78-213ENST00000482878 K7EQD1 137 aa8.76□□□□□ -1.01
CCDC78-213ENST00000482878 DEFB130BP0DP73 79 aa8.76□□□□□ -1.01
CCDC78-213ENST00000482878 DEFB130AP0DP74 79 aa8.76□□□□□ -1.01
CCDC78-213ENST00000482878 STAB1Q9NY15 2570 aa8.75□□□□□ -1.01
CCDC78-213ENST00000482878 H0YGX0 51 aa8.75□□□□□ -1.01
CCDC78-213ENST00000482878 CDC42SE2Q9NRR3 84 aa8.75□□□□□ -1.01
CCDC78-213ENST00000482878 ORMDL1Q9P0S3 153 aa8.75□□□□□ -1.01
CCDC78-213ENST00000482878 A0A096LPF7 62 aa8.75□□□□□ -1.01
CCDC78-213ENST00000482878 PLA2G2AP14555 144 aa8.75□□□□□ -1.01
CCDC78-213ENST00000482878 UBL5Q9BZL1 73 aa8.75□□□□□ -1.01
CCDC78-213ENST00000482878 MGAM2Q2M2H8 2515 aa8.74□□□□□ -1.01
CCDC78-213ENST00000482878 ESM1Q9NQ30 184 aa8.74□□□□□ -1.01
CCDC78-213ENST00000482878 CR1P17927 2039 aa8.74□□□□□ -1.01
CCDC78-213ENST00000482878 TRBV10-1A0A0K0K1A3 114 aa8.74□□□□□ -1.01
CCDC78-213ENST00000482878 NOP10Q9NPE3 64 aaKnown RBP8.74□□□□□ -1.01
CCDC78-213ENST00000482878 DEFB4AO15263 64 aa8.73□□□□□ -1.01
CCDC78-213ENST00000482878 CCKP06307 115 aa8.73□□□□□ -1.01
CCDC78-213ENST00000482878 HTN3P15516 51 aa8.73□□□□□ -1.01
CCDC78-213ENST00000482878 V9GYY9 64 aa8.73□□□□□ -1.01
CCDC78-213ENST00000482878 C11orf68Q9H3H3 251 aaKnown RBP8.73□□□□□ -1.01
CCDC78-213ENST00000482878 SMIM26A0A096LP01 95 aa8.72□□□□□ -1.01
CCDC78-213ENST00000482878 RMI2Q96E14 147 aa8.72□□□□□ -1.01
CCDC78-213ENST00000482878 F8WDY8 70 aa8.72□□□□□ -1.01
CCDC78-213ENST00000482878 HAMPP81172 84 aa8.72□□□□□ -1.01
CCDC78-213ENST00000482878 IGKV2-28A0A075B6P5 120 aa8.71□□□□□ -1.01
CCDC78-213ENST00000482878 F8WEM9 126 aa8.71□□□□□ -1.01
CCDC78-213ENST00000482878 IGKV2D-28P01615 120 aa8.71□□□□□ -1.01
CCDC78-213ENST00000482878 C1orf195Q5TG92 126 aa8.71□□□□□ -1.01
CCDC78-213ENST00000482878 LOC100131303A0A0U1RQF7 123 aa8.71□□□□□ -1.02
CCDC78-213ENST00000482878 TMEM86BQ8N661 226 aa8.71□□□□□ -1.02
CCDC78-213ENST00000482878 SEC61GP60059 68 aa8.71□□□□□ -1.02
CCDC78-213ENST00000482878 H7BZZ5 65 aa8.7□□□□□ -1.02
CCDC78-213ENST00000482878 LINC00474Q9P2X8 69 aa8.7□□□□□ -1.02
CCDC78-213ENST00000482878 MPLKIPQ8TAP9 179 aa8.7□□□□□ -1.02
CCDC78-213ENST00000482878 UBE2L6O14933 153 aa8.7□□□□□ -1.02
CCDC78-213ENST00000482878 ATP5EP2Q5VTU8 51 aa8.7□□□□□ -1.02
CCDC78-213ENST00000482878 COL6A5A8TX70 2615 aa8.69□□□□□ -1.02
CCDC78-213ENST00000482878 VWFP04275 2813 aa8.69□□□□□ -1.02
CCDC78-213ENST00000482878 TRGV4A0A0C4DH28 118 aa8.69□□□□□ -1.02
CCDC78-213ENST00000482878 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
CCDC78-213ENST00000482878 LINC01006Q8NI28 216 aa8.69□□□□□ -1.02
CCDC78-213ENST00000482878 HIVEP1P15822 2718 aa8.69□□□□□ -1.02
CCDC78-213ENST00000482878 CCL18P55774 89 aa8.68□□□□□ -1.02
CCDC78-213ENST00000482878 PLAC8L1A1L4L8 177 aa8.68□□□□□ -1.02
CCDC78-213ENST00000482878 COX7B2Q8TF08 81 aa8.68□□□□□ -1.02
CCDC78-213ENST00000482878 OTOGQ6ZRI0 2925 aa8.67□□□□□ -1.02
CCDC78-213ENST00000482878 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms