RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CKS2P33552 79 aa8.05□□□□□ -1.12
HPS4-212ENST00000481910 DSCR8Q96T75 97 aa8.05□□□□□ -1.12
HPS4-212ENST00000481910 NXT2Q9NPJ8 142 aaKnown RBP8.05□□□□□ -1.12
HPS4-212ENST00000481910 hADV29S1A0JD25 119 aa8.04□□□□□ -1.12
HPS4-212ENST00000481910 SMKR1H3BMG3 65 aa8.04□□□□□ -1.12
HPS4-212ENST00000481910 HIST1H4AP62805 103 aaKnown RBP8.04□□□□□ -1.12
HPS4-212ENST00000481910 RPL39LQ96EH5 51 aaKnown RBP8.04□□□□□ -1.12
HPS4-212ENST00000481910 APLNQ9ULZ1 77 aa8.04□□□□□ -1.12
HPS4-212ENST00000481910 TRBV7-6A0A0J9YX20 115 aa8.03□□□□□ -1.12
HPS4-212ENST00000481910 D6R8Y8 96 aa8.03□□□□□ -1.12
HPS4-212ENST00000481910 C5orf38Q86SI9 138 aa8.03□□□□□ -1.12
HPS4-212ENST00000481910 LINC00643Q86TS7 51 aa8.03□□□□□ -1.12
HPS4-212ENST00000481910 SLC25A20O43772 301 aa8.03□□□□□ -1.12
HPS4-212ENST00000481910 PCP2Q8IVA1 136 aa8.03□□□□□ -1.12
HPS4-212ENST00000481910 ORMDL3Q8N138 153 aa8.03□□□□□ -1.12
HPS4-212ENST00000481910 SERP2Q8N6R1 65 aa8.03□□□□□ -1.12
HPS4-212ENST00000481910 PPP1R17O96001 155 aa8.02□□□□□ -1.13
HPS4-212ENST00000481910 TRBV25-1A0A075B6N4 114 aa8.01□□□□□ -1.13
HPS4-212ENST00000481910 SRSF9Q13242 221 aaKnown RBP eCLIP8.01□□□□□ -1.13
HPS4-212ENST00000481910 UPK3BQ9BT76 320 aa8.01□□□□□ -1.13
HPS4-212ENST00000481910 LINC00173Q6ZV60 143 aa8.01□□□□□ -1.13
HPS4-212ENST00000481910 DAZ4Q86SG3 579 aaKnown RBP8.01□□□□□ -1.13
HPS4-212ENST00000481910 NRACQ8N912 160 aa8.01□□□□□ -1.13
HPS4-212ENST00000481910 DAZ3Q9NR90 486 aaKnown RBP8.01□□□□□ -1.13
HPS4-212ENST00000481910 IGHV3-38A0A0C4DH36 116 aa8□□□□□ -1.13
HPS4-212ENST00000481910 TRBV6-5A0A0K0K1A5 114 aa8□□□□□ -1.13
HPS4-212ENST00000481910 SDHAF1A6NFY7 115 aa8□□□□□ -1.13
HPS4-212ENST00000481910 SUMO2P61956 95 aaKnown RBP7.99□□□□□ -1.13
HPS4-212ENST00000481910 ESRGQ1W209 222 aa7.99□□□□□ -1.13
HPS4-212ENST00000481910 LYPD5Q6UWN5 251 aa7.99□□□□□ -1.13
HPS4-212ENST00000481910 IFI27L1Q96BM0 104 aa7.99□□□□□ -1.13
HPS4-212ENST00000481910 CCL18P55774 89 aa7.99□□□□□ -1.13
HPS4-212ENST00000481910 DEFB104AQ8WTQ1 72 aa7.98□□□□□ -1.13
HPS4-212ENST00000481910 POLR2KP53803 58 aaKnown RBP7.97□□□□□ -1.13
HPS4-212ENST00000481910 I3L3M4 83 aa7.97□□□□□ -1.13
HPS4-212ENST00000481910 VCYO14598 125 aa7.97□□□□□ -1.13
HPS4-212ENST00000481910 HERVK_113P61574 105 aa7.97□□□□□ -1.13
HPS4-212ENST00000481910 TRBV27A0A0K0K1C4 114 aa7.96□□□□□ -1.13
HPS4-212ENST00000481910 LOC389332A0A1B0GUA5 103 aa7.96□□□□□ -1.13
HPS4-212ENST00000481910 RPL18AQ02543 176 aaKnown RBP7.96□□□□□ -1.13
HPS4-212ENST00000481910 UBE2DNLQ8IWF7 75 aa7.96□□□□□ -1.13
HPS4-212ENST00000481910 HIST1H4GQ99525 98 aa7.96□□□□□ -1.13
HPS4-212ENST00000481910 LINC00588Q9Y4M8 146 aa7.96□□□□□ -1.13
HPS4-212ENST00000481910 LOC107984156A0A0G2JMH3 177 aa7.95□□□□□ -1.14
HPS4-212ENST00000481910 UBE2D1P51668 147 aa7.95□□□□□ -1.14
HPS4-212ENST00000481910 SDIM1Q6ZPB5 146 aa7.95□□□□□ -1.14
HPS4-212ENST00000481910 ARL17AQ8IVW1 177 aa7.95□□□□□ -1.14
HPS4-212ENST00000481910 UBE2WQ96B02 151 aa7.95□□□□□ -1.14
HPS4-212ENST00000481910 SMIM2Q9BVW6 85 aa7.95□□□□□ -1.14
HPS4-212ENST00000481910 TENM2Q9NT68 2774 aa7.95□□□□□ -1.14
HPS4-212ENST00000481910 TRBV6-8A0A0A6YYG3 113 aa7.95□□□□□ -1.14
HPS4-212ENST00000481910 LELP1Q5T871 98 aa7.95□□□□□ -1.14
HPS4-212ENST00000481910 NTM-AS1Q6ZSK4 140 aa7.95□□□□□ -1.14
HPS4-212ENST00000481910 CSMD3Q7Z407 3707 aa7.94□□□□□ -1.14
HPS4-212ENST00000481910 NTN5Q8WTR8 489 aaPredicted RBP7.94□□□□□ -1.14
HPS4-212ENST00000481910 IGHV1-58A0A0C4DH39 117 aa7.93□□□□□ -1.14
HPS4-212ENST00000481910 FCER1GP30273 86 aa7.93□□□□□ -1.14
HPS4-212ENST00000481910 ATP5EP56381 51 aaPredicted RBP7.93□□□□□ -1.14
HPS4-212ENST00000481910 PRSS3P2Q8NHM4 247 aa7.93□□□□□ -1.14
HPS4-212ENST00000481910 TRBV10-2A0A0K0K1G8 114 aa7.93□□□□□ -1.14
HPS4-212ENST00000481910 LY6G6CO95867 125 aa7.93□□□□□ -1.14
HPS4-212ENST00000481910 TSHBP01222 138 aa7.93□□□□□ -1.14
HPS4-212ENST00000481910 IFI27P40305 119 aaPredicted RBP7.93□□□□□ -1.14
HPS4-212ENST00000481910 Q8N8P6 123 aa7.93□□□□□ -1.14
HPS4-212ENST00000481910 IGLV2-18A0A075B6J9 118 aa7.91□□□□□ -1.14
HPS4-212ENST00000481910 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
HPS4-212ENST00000481910 HBDP02042 147 aa7.91□□□□□ -1.14
HPS4-212ENST00000481910 WFDC10BQ8IUB3 73 aa7.91□□□□□ -1.14
HPS4-212ENST00000481910 LINC00476Q8WZB0 136 aa7.91□□□□□ -1.14
HPS4-212ENST00000481910 TMEM243Q9BU79 118 aa7.91□□□□□ -1.14
HPS4-212ENST00000481910 Q9H8V8 135 aa7.91□□□□□ -1.14
HPS4-212ENST00000481910 FAM30AQ9NZY2 134 aa7.91□□□□□ -1.14
HPS4-212ENST00000481910 LINC01549A6NIU2 74 aa7.9□□□□□ -1.14
HPS4-212ENST00000481910 ATXN8Q156A1 80 aa7.9□□□□□ -1.14
HPS4-212ENST00000481910 CHCHD7Q9BUK0 85 aa7.9□□□□□ -1.14
HPS4-212ENST00000481910 RBM12B-AS1Q9P1G2 102 aa7.9□□□□□ -1.14
HPS4-212ENST00000481910 UBE2L6O14933 153 aa7.9□□□□□ -1.15
HPS4-212ENST00000481910 DNAH7Q8WXX0 4024 aa7.89□□□□□ -1.15
HPS4-212ENST00000481910 K7EMI3 77 aa7.89□□□□□ -1.15
HPS4-212ENST00000481910 LAGE3Q14657 143 aa7.89□□□□□ -1.15
HPS4-212ENST00000481910 ORMDL2Q53FV1 153 aa7.89□□□□□ -1.15
HPS4-212ENST00000481910 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.88□□□□□ -1.15
HPS4-212ENST00000481910 IGKV2-29A2NJV5 120 aaPredicted RBP7.88□□□□□ -1.15
HPS4-212ENST00000481910 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
HPS4-212ENST00000481910 PRR26Q8N8Z3 221 aa7.88□□□□□ -1.15
HPS4-212ENST00000481910 IGHV3-30P01768 117 aa7.88□□□□□ -1.15
HPS4-212ENST00000481910 IGHV3-33P01772 117 aa7.88□□□□□ -1.15
HPS4-212ENST00000481910 IGHV3-30-3P0DP02 117 aa7.88□□□□□ -1.15
HPS4-212ENST00000481910 IGHV3-30-5P0DP03 117 aa7.88□□□□□ -1.15
HPS4-212ENST00000481910 STARD9Q9P2P6 4700 aa7.87□□□□□ -1.15
HPS4-212ENST00000481910 H7C423 109 aa7.87□□□□□ -1.15
HPS4-212ENST00000481910 DNAH10OSP0CZ25 163 aa7.87□□□□□ -1.15
HPS4-212ENST00000481910 C20orf203Q8NBC4 194 aa7.87□□□□□ -1.15
HPS4-212ENST00000481910 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
HPS4-212ENST00000481910 LINC01546A6NGU7 62 aa7.86□□□□□ -1.15
HPS4-212ENST00000481910 BCE1O60756 84 aa7.86□□□□□ -1.15
HPS4-212ENST00000481910 LINC01556Q5JQF7 62 aa7.86□□□□□ -1.15
HPS4-212ENST00000481910 Q8N3U1 123 aa7.86□□□□□ -1.15
HPS4-212ENST00000481910 NDUFS5O43920 106 aa7.86□□□□□ -1.15
HPS4-212ENST00000481910 LGALS3P17931 250 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms