RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 IGLV4-3A0A075B6K6 122 aa5.45□□□□□ -1.54
HLA-B-253ENST00000481849 F8WDY8 70 aa5.45□□□□□ -1.54
HLA-B-253ENST00000481849 PPBPP02775 128 aa5.45□□□□□ -1.54
HLA-B-253ENST00000481849 UBE2BP63146 152 aa5.45□□□□□ -1.54
HLA-B-253ENST00000481849 LINC00242Q5T6M2 205 aa5.45□□□□□ -1.54
HLA-B-253ENST00000481849 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
HLA-B-253ENST00000481849 SMDT1Q9H4I9 107 aa5.45□□□□□ -1.54
HLA-B-253ENST00000481849 H0Y9J4 135 aa5.44□□□□□ -1.54
HLA-B-253ENST00000481849 M0QXV9 152 aa5.44□□□□□ -1.54
HLA-B-253ENST00000481849 TLX1NBP0CAT3 122 aa5.44□□□□□ -1.54
HLA-B-253ENST00000481849 KIAA0087Q14695 138 aa5.44□□□□□ -1.54
HLA-B-253ENST00000481849 KRTAP7-1Q8IUC3 87 aa5.44□□□□□ -1.54
HLA-B-253ENST00000481849 C9orf129Q5T035 196 aaKnown RBP5.43□□□□□ -1.54
HLA-B-253ENST00000481849 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
HLA-B-253ENST00000481849 TEX43Q6ZNM6 134 aa5.43□□□□□ -1.54
HLA-B-253ENST00000481849 TMEM141Q96I45 108 aa5.43□□□□□ -1.54
HLA-B-253ENST00000481849 PACRGQ96M98 296 aaPredicted RBP5.43□□□□□ -1.54
HLA-B-253ENST00000481849 MAP1LC3AQ9H492 121 aa5.43□□□□□ -1.54
HLA-B-253ENST00000481849 TOMM7Q9P0U1 55 aa5.43□□□□□ -1.54
HLA-B-253ENST00000481849 UBE2D1P51668 147 aa5.42□□□□□ -1.54
HLA-B-253ENST00000481849 ATP5L2Q7Z4Y8 100 aa5.42□□□□□ -1.54
HLA-B-253ENST00000481849 LINC00469Q8N7U9 141 aa5.42□□□□□ -1.54
HLA-B-253ENST00000481849 C2orf88Q9BSF0 95 aa5.42□□□□□ -1.54
HLA-B-253ENST00000481849 PYGO1Q9Y3Y4 419 aa5.42□□□□□ -1.54
HLA-B-253ENST00000481849 TRBV30A0A0K0K1B3 111 aa5.41□□□□□ -1.54
HLA-B-253ENST00000481849 NDUFC2-KCTD14E9PQ53 114 aa5.41□□□□□ -1.54
HLA-B-253ENST00000481849 PRSS2P07478 247 aa5.41□□□□□ -1.54
HLA-B-253ENST00000481849 C2orf66Q6UXQ4 117 aa5.41□□□□□ -1.54
HLA-B-253ENST00000481849 Q6ZN92 141 aa5.41□□□□□ -1.54
HLA-B-253ENST00000481849 VCX2Q9H322 139 aa5.41□□□□□ -1.54
HLA-B-253ENST00000481849 CYSLTR1Q9Y271 337 aa5.41□□□□□ -1.54
HLA-B-253ENST00000481849 KRTAP1-4P0C5Y4 121 aa5.4□□□□□ -1.54
HLA-B-253ENST00000481849 CKS1BP61024 79 aa5.4□□□□□ -1.54
HLA-B-253ENST00000481849 C6orf226Q5I0X4 101 aa5.4□□□□□ -1.54
HLA-B-253ENST00000481849 LINC00173Q6ZV60 143 aa5.4□□□□□ -1.54
HLA-B-253ENST00000481849 Q8N8P6 123 aa5.4□□□□□ -1.54
HLA-B-253ENST00000481849 XAGE1AQ9HD64 81 aa5.4□□□□□ -1.54
HLA-B-253ENST00000481849 LPAP08519 4548 aa5.4□□□□□ -1.55
HLA-B-253ENST00000481849 IGLV1-50A0A075B6I6 118 aa5.39□□□□□ -1.55
HLA-B-253ENST00000481849 PRSS47A8MTI9 375 aa5.39□□□□□ -1.55
HLA-B-253ENST00000481849 LAMTOR2Q9Y2Q5 125 aa5.39□□□□□ -1.55
HLA-B-253ENST00000481849 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
HLA-B-253ENST00000481849 MT-ND4LP03901 98 aa5.38□□□□□ -1.55
HLA-B-253ENST00000481849 PRR4Q16378 134 aa5.38□□□□□ -1.55
HLA-B-253ENST00000481849 ORMDL2Q53FV1 153 aa5.38□□□□□ -1.55
HLA-B-253ENST00000481849 LINC01561Q8N1V8 128 aa5.38□□□□□ -1.55
HLA-B-253ENST00000481849 AMELXQ99217 191 aa5.38□□□□□ -1.55
HLA-B-253ENST00000481849 ALKBH7Q9BT30 221 aaPredicted RBP5.38□□□□□ -1.55
HLA-B-253ENST00000481849 C22orf24Q9Y442 160 aa5.38□□□□□ -1.55
HLA-B-253ENST00000481849 IGIPA6NJ69 53 aa5.37□□□□□ -1.55
HLA-B-253ENST00000481849 CTDSP1Q9GZU7 261 aa5.37□□□□□ -1.55
HLA-B-253ENST00000481849 GEMIN7Q9H840 131 aaKnown RBP5.37□□□□□ -1.55
HLA-B-253ENST00000481849 CDKN2A-AS1Q9UH64 79 aa5.37□□□□□ -1.55
HLA-B-253ENST00000481849 ZNF861PO60384 105 aa5.36□□□□□ -1.55
HLA-B-253ENST00000481849 TSPAN13O95857 204 aa5.36□□□□□ -1.55
HLA-B-253ENST00000481849 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
HLA-B-253ENST00000481849 HERVK_113P63121 156 aa5.36□□□□□ -1.55
HLA-B-253ENST00000481849 PNRC1Q12796 327 aaPredicted RBP5.36□□□□□ -1.55
HLA-B-253ENST00000481849 KIAA1644Q3SXP7 199 aa5.36□□□□□ -1.55
HLA-B-253ENST00000481849 Q8IZM0 81 aa5.36□□□□□ -1.55
HLA-B-253ENST00000481849 RPL13AP40429 203 aaKnown RBP5.35□□□□□ -1.55
HLA-B-253ENST00000481849 IFITM2Q01629 132 aa5.35□□□□□ -1.55
HLA-B-253ENST00000481849 LBHQ53QV2 105 aaPredicted RBP5.35□□□□□ -1.55
HLA-B-253ENST00000481849 NXT2Q9NPJ8 142 aaKnown RBP5.35□□□□□ -1.55
HLA-B-253ENST00000481849 GAGE10A6NGK3 116 aa5.34□□□□□ -1.55
HLA-B-253ENST00000481849 RPL37AP8A6NKH3 93 aa5.34□□□□□ -1.55
HLA-B-253ENST00000481849 F8VRH5 84 aa5.34□□□□□ -1.55
HLA-B-253ENST00000481849 NUPR1O60356 82 aa5.34□□□□□ -1.55
HLA-B-253ENST00000481849 ADCYAP1P18509 176 aa5.34□□□□□ -1.55
HLA-B-253ENST00000481849 RAB14P61106 215 aa5.34□□□□□ -1.55
HLA-B-253ENST00000481849 PAPPA-AS1Q5QFB9 102 aa5.34□□□□□ -1.55
HLA-B-253ENST00000481849 FAM19A3Q7Z5A8 133 aa5.34□□□□□ -1.55
HLA-B-253ENST00000481849 MRPL55Q7Z7F7 128 aaKnown RBP5.34□□□□□ -1.55
HLA-B-253ENST00000481849 SCGB3A1Q96QR1 104 aa5.34□□□□□ -1.55
HLA-B-253ENST00000481849 K7EMI3 77 aa5.33□□□□□ -1.56
HLA-B-253ENST00000481849 NPSP0C0P6 89 aa5.33□□□□□ -1.56
HLA-B-253ENST00000481849 RAB5BP61020 215 aa5.33□□□□□ -1.56
HLA-B-253ENST00000481849 SEC11AP67812 179 aa5.33□□□□□ -1.56
HLA-B-253ENST00000481849 TOMM6Q96B49 74 aa5.33□□□□□ -1.56
HLA-B-253ENST00000481849 TIMM17AQ99595 171 aa5.33□□□□□ -1.56
HLA-B-253ENST00000481849 CARHSP1Q9Y2V2 147 aaKnown RBP5.33□□□□□ -1.56
HLA-B-253ENST00000481849 SMIM1B2RUZ4 78 aa5.32□□□□□ -1.56
HLA-B-253ENST00000481849 TRIAP1O43715 76 aa5.32□□□□□ -1.56
HLA-B-253ENST00000481849 BCE1O60756 84 aa5.32□□□□□ -1.56
HLA-B-253ENST00000481849 SPINK8P0C7L1 97 aa5.32□□□□□ -1.56
HLA-B-253ENST00000481849 G0S2P27469 103 aa5.32□□□□□ -1.56
HLA-B-253ENST00000481849 RPL28P46779 137 aaKnown RBP5.32□□□□□ -1.56
HLA-B-253ENST00000481849 COX7B2Q8TF08 81 aa5.32□□□□□ -1.56
HLA-B-253ENST00000481849 LINC00167Q96N53 147 aa5.32□□□□□ -1.56
HLA-B-253ENST00000481849 ANAPC11Q9NYG5 84 aa5.32□□□□□ -1.56
HLA-B-253ENST00000481849 NEBP20929 6669 aa5.31□□□□□ -1.56
HLA-B-253ENST00000481849 A0A087X002 238 aa5.31□□□□□ -1.56
HLA-B-253ENST00000481849 CXCL5P42830 114 aa5.31□□□□□ -1.56
HLA-B-253ENST00000481849 ERASQ7Z444 233 aa5.31□□□□□ -1.56
HLA-B-253ENST00000481849 TP73-AS1Q9UF72 201 aa5.31□□□□□ -1.56
HLA-B-253ENST00000481849 TINCRA0A1B0GVN0 87 aa5.3□□□□□ -1.56
HLA-B-253ENST00000481849 SCO1O75880 301 aa5.3□□□□□ -1.56
HLA-B-253ENST00000481849 PDZD11Q5EBL8 140 aa5.3□□□□□ -1.56
HLA-B-253ENST00000481849 TYMSOSQ8TAI1 123 aa5.3□□□□□ -1.56
HLA-B-253ENST00000481849 CST9LQ9H4G1 147 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms