RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 DYNLRB2Q8TF09 96 aa7.35□□□□□ -1.23
SIK3-210ENST00000480468 BRK1Q8WUW1 75 aa7.35□□□□□ -1.23
SIK3-210ENST00000480468 TM2D3Q9BRN9 247 aa7.35□□□□□ -1.23
SIK3-210ENST00000480468 LAMTOR3Q9UHA4 124 aa7.35□□□□□ -1.23
SIK3-210ENST00000480468 RNASE1P07998 156 aaKnown RBP7.34□□□□□ -1.23
SIK3-210ENST00000480468 CELSR1Q9NYQ6 3014 aa7.34□□□□□ -1.24
SIK3-210ENST00000480468 M0R2N4 97 aa7.33□□□□□ -1.24
SIK3-210ENST00000480468 PRR3P79522 188 aaKnown RBP7.33□□□□□ -1.24
SIK3-210ENST00000480468 STHQ8IWL8 128 aa7.33□□□□□ -1.24
SIK3-210ENST00000480468 TMEM254Q8TBM7 123 aa7.33□□□□□ -1.24
SIK3-210ENST00000480468 C11orf68Q9H3H3 251 aaKnown RBP7.33□□□□□ -1.24
SIK3-210ENST00000480468 C2CD3Q4AC94 2353 aa7.33□□□□□ -1.24
SIK3-210ENST00000480468 LOC100131303A0A0U1RQF7 123 aa7.33□□□□□ -1.24
SIK3-210ENST00000480468 NREPQ16612 68 aa7.33□□□□□ -1.24
SIK3-210ENST00000480468 ODF3L2Q3SX64 289 aa7.33□□□□□ -1.24
SIK3-210ENST00000480468 ZNF702PQ9H963 129 aa7.33□□□□□ -1.24
SIK3-210ENST00000480468 B4DSR2 109 aa7.32□□□□□ -1.24
SIK3-210ENST00000480468 NOP10Q9NPE3 64 aaKnown RBP7.32□□□□□ -1.24
SIK3-210ENST00000480468 IGHV4-28A0A0C4DH34 117 aa7.32□□□□□ -1.24
SIK3-210ENST00000480468 SEC61GP60059 68 aa7.32□□□□□ -1.24
SIK3-210ENST00000480468 DEFB136Q30KP8 78 aa7.32□□□□□ -1.24
SIK3-210ENST00000480468 MUC7Q8TAX7 377 aa7.31□□□□□ -1.24
SIK3-210ENST00000480468 C16orf74Q96GX8 76 aa7.31□□□□□ -1.24
SIK3-210ENST00000480468 TRGV2A0A075B6R0 118 aa7.31□□□□□ -1.24
SIK3-210ENST00000480468 IGHV4-30-2A0A087WSY4 118 aa7.31□□□□□ -1.24
SIK3-210ENST00000480468 PLAC8L1A1L4L8 177 aa7.31□□□□□ -1.24
SIK3-210ENST00000480468 RIF1Q5UIP0 2472 aaKnown RBP7.3□□□□□ -1.24
SIK3-210ENST00000480468 A0A1B0GUV1 79 aa7.3□□□□□ -1.24
SIK3-210ENST00000480468 PLA2G2AP14555 144 aa7.3□□□□□ -1.24
SIK3-210ENST00000480468 KIAA0087Q14695 138 aa7.3□□□□□ -1.24
SIK3-210ENST00000480468 C18orf65Q6ZTR6 163 aa7.3□□□□□ -1.24
SIK3-210ENST00000480468 C4orf3Q8WVX3 66 aa7.3□□□□□ -1.24
SIK3-210ENST00000480468 TRGV4A0A0C4DH28 118 aa7.29□□□□□ -1.24
SIK3-210ENST00000480468 BPY2O14599 106 aa7.29□□□□□ -1.24
SIK3-210ENST00000480468 ZNF843Q8N446 348 aa7.29□□□□□ -1.24
SIK3-210ENST00000480468 SPATA3Q8NHX4 192 aa7.29□□□□□ -1.24
SIK3-210ENST00000480468 CSPG4Q6UVK1 2322 aa7.29□□□□□ -1.24
SIK3-210ENST00000480468 IGHV4-31P0DP07 118 aa7.29□□□□□ -1.24
SIK3-210ENST00000480468 ESRGQ1W209 222 aa7.29□□□□□ -1.24
SIK3-210ENST00000480468 CEP295Q9C0D2 2601 aa7.29□□□□□ -1.24
SIK3-210ENST00000480468 HIVEP3Q5T1R4 2406 aa7.29□□□□□ -1.24
SIK3-210ENST00000480468 A0A0U1RQV1 116 aa7.28□□□□□ -1.24
SIK3-210ENST00000480468 TTC28Q96AY4 2481 aa7.28□□□□□ -1.24
SIK3-210ENST00000480468 PRYO14603 147 aa7.28□□□□□ -1.24
SIK3-210ENST00000480468 FAM229BQ4G0N7 80 aa7.28□□□□□ -1.24
SIK3-210ENST00000480468 IGLV6-57P01721 117 aa7.27□□□□□ -1.25
SIK3-210ENST00000480468 Q6ZQY7 126 aa7.27□□□□□ -1.25
SIK3-210ENST00000480468 CCL19Q99731 98 aa7.27□□□□□ -1.25
SIK3-210ENST00000480468 Q8NDZ9 215 aa7.27□□□□□ -1.25
SIK3-210ENST00000480468 GNLYP22749 145 aa7.26□□□□□ -1.25
SIK3-210ENST00000480468 FUSP35637 526 aaKnown RBP eCLIP7.26□□□□□ -1.25
SIK3-210ENST00000480468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.26□□□□□ -1.25
SIK3-210ENST00000480468 OCR1Q9BZK8 76 aa7.26□□□□□ -1.25
SIK3-210ENST00000480468 C19orf84I3L1E1 186 aa7.25□□□□□ -1.25
SIK3-210ENST00000480468 CD164L2Q6UWJ8 174 aa7.25□□□□□ -1.25
SIK3-210ENST00000480468 Q6ZTC4 211 aa7.25□□□□□ -1.25
SIK3-210ENST00000480468 CCL24O00175 119 aa7.25□□□□□ -1.25
SIK3-210ENST00000480468 GIG44P09565 113 aaPredicted RBP7.25□□□□□ -1.25
SIK3-210ENST00000480468 Q6YL49 198 aa7.25□□□□□ -1.25
SIK3-210ENST00000480468 MPLKIPQ8TAP9 179 aa7.25□□□□□ -1.25
SIK3-210ENST00000480468 COL12A1Q99715 3063 aa7.24□□□□□ -1.25
SIK3-210ENST00000480468 KHDC1LQ5JSQ8 128 aa7.24□□□□□ -1.25
SIK3-210ENST00000480468 SCXQ7RTU7 201 aa7.24□□□□□ -1.25
SIK3-210ENST00000480468 PRR15Q8IV56 129 aa7.24□□□□□ -1.25
SIK3-210ENST00000480468 ZFHX2Q9C0A1 2572 aaPredicted RBP7.23□□□□□ -1.25
SIK3-210ENST00000480468 COX7BP24311 80 aa7.23□□□□□ -1.25
SIK3-210ENST00000480468 CMC4P56277 68 aaPredicted RBP7.23□□□□□ -1.25
SIK3-210ENST00000480468 LINC01356Q8N9X3 169 aa7.23□□□□□ -1.25
SIK3-210ENST00000480468 IGKV4-1P06312 121 aa7.23□□□□□ -1.25
SIK3-210ENST00000480468 CRYBG3Q68DQ2 2970 aa7.23□□□□□ -1.25
SIK3-210ENST00000480468 DSCR9P59020 149 aa7.22□□□□□ -1.25
SIK3-210ENST00000480468 NOTCH3Q9UM47 2321 aa7.22□□□□□ -1.25
SIK3-210ENST00000480468 ATRXP46100 2492 aa7.22□□□□□ -1.25
SIK3-210ENST00000480468 FSHBP01225 129 aa7.21□□□□□ -1.25
SIK3-210ENST00000480468 C9orf116Q5BN46 136 aaPredicted RBP7.21□□□□□ -1.25
SIK3-210ENST00000480468 MAP1AP78559 2803 aaPredicted RBP7.21□□□□□ -1.25
SIK3-210ENST00000480468 DIRC1Q969H9 104 aa7.21□□□□□ -1.26
SIK3-210ENST00000480468 A0A0J9YWU9 116 aa7.2□□□□□ -1.26
SIK3-210ENST00000480468 IGHV4-30-4P0DP06 118 aa7.2□□□□□ -1.26
SIK3-210ENST00000480468 Q6ZRU5 148 aa7.2□□□□□ -1.26
SIK3-210ENST00000480468 LINC00269Q8N2A0 174 aa7.2□□□□□ -1.26
SIK3-210ENST00000480468 Q1T7F1 81 aa7.2□□□□□ -1.26
SIK3-210ENST00000480468 CSNK1G2-AS1Q8NCQ2 148 aa7.2□□□□□ -1.26
SIK3-210ENST00000480468 CHCHD10Q8WYQ3 142 aaPredicted RBP7.2□□□□□ -1.26
SIK3-210ENST00000480468 VPS13CQ709C8 3753 aa7.19□□□□□ -1.26
SIK3-210ENST00000480468 hDV103S1A0JD37 113 aa7.19□□□□□ -1.26
SIK3-210ENST00000480468 BBC3Q96PG8 261 aaPredicted RBP7.19□□□□□ -1.26
SIK3-210ENST00000480468 LCE6AA0A183 80 aa7.19□□□□□ -1.26
SIK3-210ENST00000480468 CLPSL2Q6UWE3 100 aa7.19□□□□□ -1.26
SIK3-210ENST00000480468 GYPEP15421 78 aa7.18□□□□□ -1.26
SIK3-210ENST00000480468 ELOF1P60002 83 aaKnown RBP7.18□□□□□ -1.26
SIK3-210ENST00000480468 LINC00612Q8N6U2 182 aa7.18□□□□□ -1.26
SIK3-210ENST00000480468 ESM1Q9NQ30 184 aa7.18□□□□□ -1.26
SIK3-210ENST00000480468 CELA1Q9UNI1 258 aa7.18□□□□□ -1.26
SIK3-210ENST00000480468 PMAIP1Q13794 54 aa7.17□□□□□ -1.26
SIK3-210ENST00000480468 WNK1Q9H4A3 2382 aa7.17□□□□□ -1.26
SIK3-210ENST00000480468 ZNF73O43830 326 aaPredicted RBP7.17□□□□□ -1.26
SIK3-210ENST00000480468 GVQW2A0A096LPI5 108 aaPredicted RBP7.16□□□□□ -1.26
SIK3-210ENST00000480468 LINC01006Q8NI28 216 aa7.16□□□□□ -1.26
SIK3-210ENST00000480468 HIGD2AQ9BW72 106 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms