RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ALKBH7Q9BT30 221 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-213ENST00000480102 MRPL35Q9NZE8 188 aaKnown RBP3.12□□□□□ -1.91
PTCD3-213ENST00000480102 SRRM2Q9UQ35 2752 aaKnown RBP3.11□□□□□ -1.91
PTCD3-213ENST00000480102 IGLV4-69A0A075B6H9 119 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-213ENST00000480102 TGIF2-C20orf24A0A0A6YYL0 155 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 TRBV30A0A0K0K1B3 111 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 LECT2O14960 151 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 XCL1P47992 114 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 UBE2D1P51668 147 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 KRTAP10-4P60372 401 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-213ENST00000480102 RAB5BP61020 215 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 RPL39P62891 51 aaKnown RBP3.11□□□□□ -1.91
PTCD3-213ENST00000480102 HERVK_113P63121 156 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 SYCNQ0VAF6 134 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 LINC00242Q5T6M2 205 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 Q5VSD8 79 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 SFTA2Q6UW10 78 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 CLPSL2Q6UWE3 100 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 TEX43Q6ZNM6 134 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 Q6ZUT4 128 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 DEFB104AQ8WTQ1 72 aa3.11□□□□□ -1.91
PTCD3-213ENST00000480102 TRAV13-1A0A0B4J241 112 aa3.1□□□□□ -1.91
PTCD3-213ENST00000480102 TINCRA0A1B0GVN0 87 aa3.1□□□□□ -1.91
PTCD3-213ENST00000480102 IFITM10A6NMD0 228 aa3.1□□□□□ -1.91
PTCD3-213ENST00000480102 OXTP01178 125 aa3.1□□□□□ -1.91
PTCD3-213ENST00000480102 APOC3P02656 99 aa3.1□□□□□ -1.91
PTCD3-213ENST00000480102 LINC00614P0C842 121 aa3.1□□□□□ -1.91
PTCD3-213ENST00000480102 CXCL5P42830 114 aa3.1□□□□□ -1.91
PTCD3-213ENST00000480102 KIAA0087Q14695 138 aa3.1□□□□□ -1.91
PTCD3-213ENST00000480102 LINC00173Q6ZV60 143 aa3.1□□□□□ -1.91
PTCD3-213ENST00000480102 CHCHD1Q96BP2 118 aaKnown RBP3.1□□□□□ -1.91
PTCD3-213ENST00000480102 CARD19Q96LW7 228 aa3.1□□□□□ -1.91
PTCD3-213ENST00000480102 RPS10P5Q9NQ39 176 aa3.1□□□□□ -1.91
PTCD3-213ENST00000480102 LOC107984640A0A0U1RRK4 108 aa3.09□□□□□ -1.91
PTCD3-213ENST00000480102 H0Y8G0 127 aa3.09□□□□□ -1.91
PTCD3-213ENST00000480102 Q8IZM0 81 aa3.09□□□□□ -1.91
PTCD3-213ENST00000480102 SMCO4Q9NRQ5 59 aa3.09□□□□□ -1.91
PTCD3-213ENST00000480102 HERC1Q15751 4861 aa3.09□□□□□ -1.92
PTCD3-213ENST00000480102 A0A087WYN8 130 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-213ENST00000480102 NDUFA1O15239 70 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 ATP5LO75964 103 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 HBDP02042 147 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 INAFM2P0DMQ5 153 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 KRTAP10-7P60409 375 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-213ENST00000480102 SPAG11BQ08648 103 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 FABP9Q0Z7S8 132 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 PMVKQ15126 192 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 PDZD11Q5EBL8 140 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 Q6ZRU5 148 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 FA2HQ7L5A8 372 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 C18orf32Q8TCD1 76 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 C7orf33Q8WU49 177 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 PACRGQ96M98 296 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-213ENST00000480102 SCGB3A1Q96QR1 104 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 CAMK2N2Q96S95 79 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 CST9LQ9H4G1 147 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 TRAPPC1Q9Y5R8 145 aa3.08□□□□□ -1.92
PTCD3-213ENST00000480102 DMBT1Q9UGM3 2413 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-213ENST00000480102 A0A096LNJ9 63 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 TRAV12-1A0A0B4J245 112 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 IGKV3OR2-268A0A0C4DH90 116 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 A0A0J9YXV3 536 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 LOC389332A0A1B0GUA5 103 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 NDUFC2-KCTD14E9PQ53 114 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 H3BRM9 83 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 IGLC3P0DOY3 106 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 COX6A2Q02221 97 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 HIGD2BQ4VC39 106 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 C5orf38Q86SI9 138 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 TP73-AS1Q9UF72 201 aa3.07□□□□□ -1.92
PTCD3-213ENST00000480102 FAT3Q8TDW7 4589 aa3.06□□□□□ -1.92
PTCD3-213ENST00000480102 A0A096LNI7 61 aa3.06□□□□□ -1.92
PTCD3-213ENST00000480102 SMIM1B2RUZ4 78 aa3.06□□□□□ -1.92
PTCD3-213ENST00000480102 F8VRH5 84 aa3.06□□□□□ -1.92
PTCD3-213ENST00000480102 PANO1I0J062 215 aa3.06□□□□□ -1.92
PTCD3-213ENST00000480102 FUSP35637 526 aaKnown RBP eCLIP3.06□□□□□ -1.92
PTCD3-213ENST00000480102 KRTAP10-6P60371 365 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-213ENST00000480102 RPL37AP61513 92 aaKnown RBP3.06□□□□□ -1.92
PTCD3-213ENST00000480102 LRP1Q07954 4544 aaKnown RBP3.06□□□□□ -1.92
PTCD3-213ENST00000480102 COX17Q14061 63 aa3.06□□□□□ -1.92
PTCD3-213ENST00000480102 LINC01620Q4KN68 170 aa3.06□□□□□ -1.92
PTCD3-213ENST00000480102 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
PTCD3-213ENST00000480102 ORAOV1Q8WV07 137 aa3.06□□□□□ -1.92
PTCD3-213ENST00000480102 OPRPNQ99935 248 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-213ENST00000480102 GEMIN7Q9H840 131 aaKnown RBP3.06□□□□□ -1.92
PTCD3-213ENST00000480102 SMR3BP02814 79 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-213ENST00000480102 MT3P25713 68 aa3.05□□□□□ -1.92
PTCD3-213ENST00000480102 RPL24P83731 157 aaKnown RBP3.05□□□□□ -1.92
PTCD3-213ENST00000480102 KIAA1644Q3SXP7 199 aa3.05□□□□□ -1.92
PTCD3-213ENST00000480102 RNASE13Q5GAN3 156 aaKnown RBP3.05□□□□□ -1.92
PTCD3-213ENST00000480102 C6orf226Q5I0X4 101 aa3.05□□□□□ -1.92
PTCD3-213ENST00000480102 Q6ZRP5 223 aa3.05□□□□□ -1.92
PTCD3-213ENST00000480102 STPG4Q8N801 248 aa3.05□□□□□ -1.92
PTCD3-213ENST00000480102 LINC00526Q96FQ7 95 aa3.05□□□□□ -1.92
PTCD3-213ENST00000480102 C6orf48Q9UBA6 75 aa3.05□□□□□ -1.92
PTCD3-213ENST00000480102 CDKN2A-AS1Q9UH64 79 aa3.05□□□□□ -1.92
PTCD3-213ENST00000480102 COLCA2A8K830 154 aa3.04□□□□□ -1.92
PTCD3-213ENST00000480102 LINC00587B1AMM8 73 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms