RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 TRGV4A0A0C4DH28 118 aa9.37□□□□□ -0.91
C9orf78-205ENST00000480023 COX17Q14061 63 aa9.37□□□□□ -0.91
C9orf78-205ENST00000480023 MAP1AP78559 2803 aaPredicted RBP9.36□□□□□ -0.91
C9orf78-205ENST00000480023 LINC00482Q8N8I6 264 aa9.36□□□□□ -0.91
C9orf78-205ENST00000480023 C11orf68Q9H3H3 251 aaKnown RBP9.35□□□□□ -0.91
C9orf78-205ENST00000480023 KHDC1LQ5JSQ8 128 aa9.35□□□□□ -0.91
C9orf78-205ENST00000480023 A0A1B0GUV1 79 aa9.34□□□□□ -0.91
C9orf78-205ENST00000480023 ZNF561-AS1K7EIQ3 104 aa9.34□□□□□ -0.91
C9orf78-205ENST00000480023 PRR3P79522 188 aaKnown RBP9.34□□□□□ -0.91
C9orf78-205ENST00000480023 RBM3P98179 157 aaKnown RBP9.34□□□□□ -0.91
C9orf78-205ENST00000480023 LINC00575Q6W349 94 aa9.34□□□□□ -0.91
C9orf78-205ENST00000480023 C6orf223Q8N319 242 aa9.34□□□□□ -0.91
C9orf78-205ENST00000480023 LINC01547P58512 204 aaPredicted RBP9.34□□□□□ -0.91
C9orf78-205ENST00000480023 NOTCH3Q9UM47 2321 aa9.33□□□□□ -0.92
C9orf78-205ENST00000480023 C6orf99Q4VX62 202 aa9.33□□□□□ -0.92
C9orf78-205ENST00000480023 IGHV4-28A0A0C4DH34 117 aa9.32□□□□□ -0.92
C9orf78-205ENST00000480023 CXCL6P80162 114 aa9.32□□□□□ -0.92
C9orf78-205ENST00000480023 KIAA0087Q14695 138 aa9.32□□□□□ -0.92
C9orf78-205ENST00000480023 CMC4P56277 68 aaPredicted RBP9.31□□□□□ -0.92
C9orf78-205ENST00000480023 C9orf66Q5T8R8 295 aa9.31□□□□□ -0.92
C9orf78-205ENST00000480023 MXRA5Q9NR99 2828 aa9.31□□□□□ -0.92
C9orf78-205ENST00000480023 PDE6GP18545 87 aa9.31□□□□□ -0.92
C9orf78-205ENST00000480023 Q6ZVQ6 151 aa9.31□□□□□ -0.92
C9orf78-205ENST00000480023 CSNK1G2-AS1Q8NCQ2 148 aa9.31□□□□□ -0.92
C9orf78-205ENST00000480023 PRO0628Q9UI54 55 aa9.3□□□□□ -0.92
C9orf78-205ENST00000480023 H3BQ85 93 aa9.29□□□□□ -0.92
C9orf78-205ENST00000480023 MYO9AB2RTY4 2548 aa9.29□□□□□ -0.92
C9orf78-205ENST00000480023 RNASE1P07998 156 aaKnown RBP9.28□□□□□ -0.92
C9orf78-205ENST00000480023 USP9YO00507 2555 aaPredicted RBP9.28□□□□□ -0.92
C9orf78-205ENST00000480023 ZANQ9Y493 2812 aa9.28□□□□□ -0.92
C9orf78-205ENST00000480023 SMIM26A0A096LP01 95 aa9.28□□□□□ -0.92
C9orf78-205ENST00000480023 TRAV10A0A0B4J240 114 aa9.28□□□□□ -0.92
C9orf78-205ENST00000480023 M0R2N4 97 aa9.28□□□□□ -0.92
C9orf78-205ENST00000480023 NDUFC1O43677 76 aa9.28□□□□□ -0.92
C9orf78-205ENST00000480023 MAPK1IP1LQ8NDC0 245 aa9.28□□□□□ -0.92
C9orf78-205ENST00000480023 Q8NDZ9 215 aa9.28□□□□□ -0.92
C9orf78-205ENST00000480023 IGHV4-31P0DP07 118 aa9.27□□□□□ -0.93
C9orf78-205ENST00000480023 MUC7Q8TAX7 377 aa9.27□□□□□ -0.93
C9orf78-205ENST00000480023 C16orf95Q9H693 158 aa9.27□□□□□ -0.93
C9orf78-205ENST00000480023 HAMPP81172 84 aa9.26□□□□□ -0.93
C9orf78-205ENST00000480023 CD164L2Q6UWJ8 174 aa9.26□□□□□ -0.93
C9orf78-205ENST00000480023 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
C9orf78-205ENST00000480023 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
C9orf78-205ENST00000480023 CSMD2Q7Z408 3487 aa9.26□□□□□ -0.93
C9orf78-205ENST00000480023 DOPEY1Q5JWR5 2465 aa9.26□□□□□ -0.93
C9orf78-205ENST00000480023 CR1P17927 2039 aa9.26□□□□□ -0.93
C9orf78-205ENST00000480023 CCL24O00175 119 aa9.25□□□□□ -0.93
C9orf78-205ENST00000480023 PLA2G2AP14555 144 aa9.25□□□□□ -0.93
C9orf78-205ENST00000480023 ATP5EP56381 51 aaPredicted RBP9.25□□□□□ -0.93
C9orf78-205ENST00000480023 FP248Q71RG6 208 aaPredicted RBP9.25□□□□□ -0.93
C9orf78-205ENST00000480023 RMI2Q96E14 147 aa9.25□□□□□ -0.93
C9orf78-205ENST00000480023 C19orf73Q9NVV2 129 aa9.25□□□□□ -0.93
C9orf78-205ENST00000480023 F8WEM9 126 aa9.25□□□□□ -0.93
C9orf78-205ENST00000480023 LINC00612Q8N6U2 182 aa9.25□□□□□ -0.93
C9orf78-205ENST00000480023 CHD6Q8TD26 2715 aa9.24□□□□□ -0.93
C9orf78-205ENST00000480023 TRBV7-4A0A0J9YYF1 115 aa9.24□□□□□ -0.93
C9orf78-205ENST00000480023 IGLV6-57P01721 117 aa9.24□□□□□ -0.93
C9orf78-205ENST00000480023 SNURFQ9Y675 71 aa9.24□□□□□ -0.93
C9orf78-205ENST00000480023 ITPR1Q14643 2758 aa9.24□□□□□ -0.93
C9orf78-205ENST00000480023 RPL35AP18077 110 aaKnown RBP9.23□□□□□ -0.93
C9orf78-205ENST00000480023 Q8N3U1 123 aa9.23□□□□□ -0.93
C9orf78-205ENST00000480023 GYPEP15421 78 aa9.23□□□□□ -0.93
C9orf78-205ENST00000480023 CLPSL2Q6UWE3 100 aa9.23□□□□□ -0.93
C9orf78-205ENST00000480023 WFDC10AQ9H1F0 79 aa9.23□□□□□ -0.93
C9orf78-205ENST00000480023 C9orf116Q5BN46 136 aaPredicted RBP9.22□□□□□ -0.93
C9orf78-205ENST00000480023 ZNF843Q8N446 348 aa9.22□□□□□ -0.93
C9orf78-205ENST00000480023 NCOR2Q9Y618 2525 aa9.22□□□□□ -0.93
C9orf78-205ENST00000480023 Q6ZQY7 126 aa9.22□□□□□ -0.93
C9orf78-205ENST00000480023 TLN2Q9Y4G6 2542 aa9.21□□□□□ -0.93
C9orf78-205ENST00000480023 CHCHD10Q8WYQ3 142 aaPredicted RBP9.21□□□□□ -0.94
C9orf78-205ENST00000480023 USP9XQ93008 2570 aaPredicted RBP9.21□□□□□ -0.94
C9orf78-205ENST00000480023 ANKRD17O75179 2603 aaKnown RBP9.21□□□□□ -0.94
C9orf78-205ENST00000480023 WNK1Q9H4A3 2382 aa9.21□□□□□ -0.94
C9orf78-205ENST00000480023 LINC00269Q8N2A0 174 aa9.2□□□□□ -0.94
C9orf78-205ENST00000480023 SPATA3Q8NHX4 192 aa9.2□□□□□ -0.94
C9orf78-205ENST00000480023 SETXQ7Z333 2677 aaKnown RBP9.2□□□□□ -0.94
C9orf78-205ENST00000480023 ERC2-IT1O76042 136 aa9.2□□□□□ -0.94
C9orf78-205ENST00000480023 TM2D3Q9BRN9 247 aa9.2□□□□□ -0.94
C9orf78-205ENST00000480023 JMJD1CQ15652 2540 aa9.19□□□□□ -0.94
C9orf78-205ENST00000480023 TRBV7-6A0A0J9YX20 115 aa9.19□□□□□ -0.94
C9orf78-205ENST00000480023 IGLV1-51P01701 117 aa9.19□□□□□ -0.94
C9orf78-205ENST00000480023 MIFP14174 115 aa9.19□□□□□ -0.94
C9orf78-205ENST00000480023 A0A0J9YWU9 116 aa9.18□□□□□ -0.94
C9orf78-205ENST00000480023 IGHV4-30-4P0DP06 118 aa9.18□□□□□ -0.94
C9orf78-205ENST00000480023 DEFB130BP0DP73 79 aa9.18□□□□□ -0.94
C9orf78-205ENST00000480023 DEFB130AP0DP74 79 aa9.18□□□□□ -0.94
C9orf78-205ENST00000480023 CHD8Q9HCK8 2581 aa9.18□□□□□ -0.94
C9orf78-205ENST00000480023 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.17□□□□□ -0.94
C9orf78-205ENST00000480023 PRO0255Q9UI72 69 aa9.17□□□□□ -0.94
C9orf78-205ENST00000480023 REG3AQ06141 175 aa9.16□□□□□ -0.94
C9orf78-205ENST00000480023 NREPQ16612 68 aa9.16□□□□□ -0.94
C9orf78-205ENST00000480023 LINC01006Q8NI28 216 aa9.16□□□□□ -0.94
C9orf78-205ENST00000480023 C10orf25Q5T742 122 aa9.15□□□□□ -0.94
C9orf78-205ENST00000480023 TMEM254Q8TBM7 123 aa9.15□□□□□ -0.94
C9orf78-205ENST00000480023 DIRC1Q969H9 104 aa9.15□□□□□ -0.94
C9orf78-205ENST00000480023 FLNCQ14315 2725 aa9.15□□□□□ -0.94
C9orf78-205ENST00000480023 NBPF19A0A087WUL8 3843 aa9.15□□□□□ -0.95
C9orf78-205ENST00000480023 BBC3Q96PG8 261 aaPredicted RBP9.14□□□□□ -0.95
C9orf78-205ENST00000480023 AKAP9Q99996 3911 aa9.14□□□□□ -0.95
C9orf78-205ENST00000480023 IGLV10-54A0A075B6I4 117 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms