RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 HELZ2Q9BYK8 2649 aaKnown RBP17.06■□□□□ 0.32
SYNGAP1-206ENST00000479510 PAX4O43316 350 aa17.05■□□□□ 0.32
SYNGAP1-206ENST00000479510 XCL1P47992 114 aa17.05■□□□□ 0.32
SYNGAP1-206ENST00000479510 Q9HAA7 133 aa17.04■□□□□ 0.32
SYNGAP1-206ENST00000479510 PDZD2O15018 2839 aa17.02■□□□□ 0.31
SYNGAP1-206ENST00000479510 A0A087WYN8 130 aa17.01■□□□□ 0.31
SYNGAP1-206ENST00000479510 CXCL5P42830 114 aa17.01■□□□□ 0.31
SYNGAP1-206ENST00000479510 C9orf66Q5T8R8 295 aa17.01■□□□□ 0.31
SYNGAP1-206ENST00000479510 ANK3Q12955 4377 aaKnown RBP17■□□□□ 0.31
SYNGAP1-206ENST00000479510 COX17Q14061 63 aa17■□□□□ 0.31
SYNGAP1-206ENST00000479510 CD164L2Q6UWJ8 174 aa17■□□□□ 0.31
SYNGAP1-206ENST00000479510 OBSCN-AS1Q96MR7 158 aa17■□□□□ 0.31
SYNGAP1-206ENST00000479510 SMCR5Q8TEV8 140 aa16.99■□□□□ 0.31
SYNGAP1-206ENST00000479510 OR13C6PQ8NH95 151 aa16.97■□□□□ 0.31
SYNGAP1-206ENST00000479510 NDUFC2O95298 119 aa16.97■□□□□ 0.31
SYNGAP1-206ENST00000479510 A0A1B0GX51 115 aa16.96■□□□□ 0.31
SYNGAP1-206ENST00000479510 SETD2Q9BYW2 2564 aaPredicted RBP16.96■□□□□ 0.31
SYNGAP1-206ENST00000479510 APOC4P55056 127 aa16.95■□□□□ 0.3
SYNGAP1-206ENST00000479510 C11orf68Q9H3H3 251 aaKnown RBP16.95■□□□□ 0.3
SYNGAP1-206ENST00000479510 IGHV4-28A0A0C4DH34 117 aa16.94■□□□□ 0.3
SYNGAP1-206ENST00000479510 B5MCH6 92 aa16.94■□□□□ 0.3
SYNGAP1-206ENST00000479510 CCDC179H3BU77 68 aa16.94■□□□□ 0.3
SYNGAP1-206ENST00000479510 KIAA0087Q14695 138 aa16.94■□□□□ 0.3
SYNGAP1-206ENST00000479510 GAGE2AQ6NT46 116 aa16.94■□□□□ 0.3
SYNGAP1-206ENST00000479510 LECT2O14960 151 aa16.93■□□□□ 0.3
SYNGAP1-206ENST00000479510 CFAP161Q6P656 301 aa16.93■□□□□ 0.3
SYNGAP1-206ENST00000479510 ACANP16112 2415 aa16.93■□□□□ 0.3
SYNGAP1-206ENST00000479510 LINC00269Q8N2A0 174 aa16.92■□□□□ 0.3
SYNGAP1-206ENST00000479510 ATP5G1P05496 136 aa16.92■□□□□ 0.3
SYNGAP1-206ENST00000479510 CHCHD10Q8WYQ3 142 aaPredicted RBP16.92■□□□□ 0.3
SYNGAP1-206ENST00000479510 CLPSL2Q6UWE3 100 aa16.91■□□□□ 0.3
SYNGAP1-206ENST00000479510 LINC00167Q96N53 147 aa16.91■□□□□ 0.3
SYNGAP1-206ENST00000479510 MTORP42345 2549 aa16.91■□□□□ 0.3
SYNGAP1-206ENST00000479510 NIPBLQ6KC79 2804 aaeCLIP16.9■□□□□ 0.3
SYNGAP1-206ENST00000479510 A0A096LPF7 62 aa16.9■□□□□ 0.3
SYNGAP1-206ENST00000479510 MUC7Q8TAX7 377 aa16.9■□□□□ 0.3
SYNGAP1-206ENST00000479510 KLK5Q9Y337 293 aaPredicted RBP16.9■□□□□ 0.3
SYNGAP1-206ENST00000479510 REG3AQ06141 175 aa16.89■□□□□ 0.29
SYNGAP1-206ENST00000479510 ORMDL1Q9P0S3 153 aa16.89■□□□□ 0.29
SYNGAP1-206ENST00000479510 DAD1P61803 113 aa16.89■□□□□ 0.29
SYNGAP1-206ENST00000479510 CUBNO60494 3623 aa16.88■□□□□ 0.29
SYNGAP1-206ENST00000479510 SMR3AQ99954 134 aa16.87■□□□□ 0.29
SYNGAP1-206ENST00000479510 FAM236AA0A1B0GUQ0 79 aa16.87■□□□□ 0.29
SYNGAP1-206ENST00000479510 FAM236BA0A1B0GV22 79 aa16.87■□□□□ 0.29
SYNGAP1-206ENST00000479510 ANGP03950 147 aaKnown RBP16.87■□□□□ 0.29
SYNGAP1-206ENST00000479510 DEFB135Q30KP9 77 aa16.87■□□□□ 0.29
SYNGAP1-206ENST00000479510 TMEM126AQ9H061 195 aa16.87■□□□□ 0.29
SYNGAP1-206ENST00000479510 MIFP14174 115 aa16.86■□□□□ 0.29
SYNGAP1-206ENST00000479510 NANOS2P60321 138 aaKnown RBP16.85■□□□□ 0.29
SYNGAP1-206ENST00000479510 C14orf132Q9NPU4 83 aa16.84■□□□□ 0.29
SYNGAP1-206ENST00000479510 GCN1Q92616 2671 aaKnown RBP16.84■□□□□ 0.29
SYNGAP1-206ENST00000479510 SS18L2Q9UHA2 77 aa16.83■□□□□ 0.28
SYNGAP1-206ENST00000479510 C9orf129Q5T035 196 aaKnown RBP16.82■□□□□ 0.28
SYNGAP1-206ENST00000479510 HIVEP2P31629 2446 aa16.82■□□□□ 0.28
SYNGAP1-206ENST00000479510 UNC79Q9P2D8 2635 aa16.82■□□□□ 0.28
SYNGAP1-206ENST00000479510 Q8NAQ8 132 aa16.82■□□□□ 0.28
SYNGAP1-206ENST00000479510 LELP1Q5T871 98 aa16.81■□□□□ 0.28
SYNGAP1-206ENST00000479510 Q8N814 137 aa16.81■□□□□ 0.28
SYNGAP1-206ENST00000479510 SVIPQ8NHG7 77 aa16.8■□□□□ 0.28
SYNGAP1-206ENST00000479510 ITPR2Q14571 2701 aa16.8■□□□□ 0.28
SYNGAP1-206ENST00000479510 SPART-AS1P0CW21 52 aa16.79■□□□□ 0.28
SYNGAP1-206ENST00000479510 JMJD7-PLA2G4BH0Y9G9 81 aa16.79■□□□□ 0.28
SYNGAP1-206ENST00000479510 Q6JHZ5 121 aa16.79■□□□□ 0.28
SYNGAP1-206ENST00000479510 SPATA3Q8NHX4 192 aa16.79■□□□□ 0.28
SYNGAP1-206ENST00000479510 DEFB4AO15263 64 aa16.78■□□□□ 0.28
SYNGAP1-206ENST00000479510 IGLV10-54A0A075B6I4 117 aa16.77■□□□□ 0.28
SYNGAP1-206ENST00000479510 TMEM256-PLSCR3K7ERE1 68 aa16.77■□□□□ 0.28
SYNGAP1-206ENST00000479510 NCR3O14931 201 aa16.77■□□□□ 0.28
SYNGAP1-206ENST00000479510 SLPIP03973 132 aa16.77■□□□□ 0.28
SYNGAP1-206ENST00000479510 FN1P02751 2386 aaKnown RBP16.75■□□□□ 0.27
SYNGAP1-206ENST00000479510 A0A0J9YWU9 116 aa16.75■□□□□ 0.27
SYNGAP1-206ENST00000479510 IGHV4-30-4P0DP06 118 aa16.75■□□□□ 0.27
SYNGAP1-206ENST00000479510 HIST1H4AP62805 103 aaKnown RBP16.75■□□□□ 0.27
SYNGAP1-206ENST00000479510 PRR3P79522 188 aaKnown RBP16.75■□□□□ 0.27
SYNGAP1-206ENST00000479510 Q8N3U1 123 aa16.75■□□□□ 0.27
SYNGAP1-206ENST00000479510 PRR34Q9NV39 138 aa16.75■□□□□ 0.27
SYNGAP1-206ENST00000479510 CELA1Q9UNI1 258 aa16.75■□□□□ 0.27
SYNGAP1-206ENST00000479510 CCKP06307 115 aa16.74■□□□□ 0.27
SYNGAP1-206ENST00000479510 FASNP49327 2511 aaKnown RBP16.74■□□□□ 0.27
SYNGAP1-206ENST00000479510 LINC00846Q9NV44 126 aa16.73■□□□□ 0.27
SYNGAP1-206ENST00000479510 SPAG11BQ08648 103 aa16.73■□□□□ 0.27
SYNGAP1-206ENST00000479510 C9orf116Q5BN46 136 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-206ENST00000479510 HECTD1Q9ULT8 2610 aa16.72■□□□□ 0.27
SYNGAP1-206ENST00000479510 C3orf22Q8N5N4 141 aa16.71■□□□□ 0.27
SYNGAP1-206ENST00000479510 GVQW2A0A096LPI5 108 aaPredicted RBP16.7■□□□□ 0.26
SYNGAP1-206ENST00000479510 UQCRQO14949 82 aa16.7■□□□□ 0.26
SYNGAP1-206ENST00000479510 WIPF1O43516 503 aa16.7■□□□□ 0.26
SYNGAP1-206ENST00000479510 S100A7L2Q5SY68 101 aa16.7■□□□□ 0.26
SYNGAP1-206ENST00000479510 ATOX1O00244 68 aa16.68■□□□□ 0.26
SYNGAP1-206ENST00000479510 WFDC9Q8NEX5 89 aa16.68■□□□□ 0.26
SYNGAP1-206ENST00000479510 C6orf99Q4VX62 202 aa16.68■□□□□ 0.26
SYNGAP1-206ENST00000479510 UNQ6190/PRO20217Q6UXQ8 127 aa16.67■□□□□ 0.26
SYNGAP1-206ENST00000479510 LINC00575Q6W349 94 aa16.67■□□□□ 0.26
SYNGAP1-206ENST00000479510 INAFM1C9JVW0 142 aa16.66■□□□□ 0.26
SYNGAP1-206ENST00000479510 CYSRT1A8MQ03 144 aa16.65■□□□□ 0.26
SYNGAP1-206ENST00000479510 C10orf25Q5T742 122 aa16.65■□□□□ 0.26
SYNGAP1-206ENST00000479510 Q8NDZ9 215 aa16.65■□□□□ 0.26
SYNGAP1-206ENST00000479510 LINC00526Q96FQ7 95 aa16.65■□□□□ 0.26
SYNGAP1-206ENST00000479510 IGLV6-57P01721 117 aa16.64■□□□□ 0.25
SYNGAP1-206ENST00000479510 ATP5EP2Q5VTU8 51 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms