RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CHKB-CPT1BH3BT56 60 aa10.28□□□□□ -0.76
COL20A1-206ENST00000479501 CD164L2Q6UWJ8 174 aa10.28□□□□□ -0.76
COL20A1-206ENST00000479501 CDIP1Q9H305 208 aa10.28□□□□□ -0.76
COL20A1-206ENST00000479501 SHISA2Q6UWI4 295 aa10.27□□□□□ -0.77
COL20A1-206ENST00000479501 HRCT1Q6UXD1 115 aa10.27□□□□□ -0.77
COL20A1-206ENST00000479501 SMIM1B2RUZ4 78 aa10.26□□□□□ -0.77
COL20A1-206ENST00000479501 A0A087WVE0 104 aa10.26□□□□□ -0.77
COL20A1-206ENST00000479501 FAM19A3Q7Z5A8 133 aa10.25□□□□□ -0.77
COL20A1-206ENST00000479501 V9GYY9 64 aa10.25□□□□□ -0.77
COL20A1-206ENST00000479501 CSDC2Q9Y534 153 aaKnown RBP10.25□□□□□ -0.77
COL20A1-206ENST00000479501 LAMA1P25391 3075 aa10.25□□□□□ -0.77
COL20A1-206ENST00000479501 H0Y9J4 135 aa10.25□□□□□ -0.77
COL20A1-206ENST00000479501 ADAMTSL4-AS1Q5T5F5 129 aa10.25□□□□□ -0.77
COL20A1-206ENST00000479501 MUC4Q99102 2169 aa10.24□□□□□ -0.77
COL20A1-206ENST00000479501 COX6A2Q02221 97 aa10.24□□□□□ -0.77
COL20A1-206ENST00000479501 ATP5EP56381 51 aaPredicted RBP10.24□□□□□ -0.77
COL20A1-206ENST00000479501 LELP1Q5T871 98 aa10.24□□□□□ -0.77
COL20A1-206ENST00000479501 IGHV4-30-4P0DP06 118 aa10.23□□□□□ -0.77
COL20A1-206ENST00000479501 FHL2Q14192 279 aa10.23□□□□□ -0.77
COL20A1-206ENST00000479501 C11orf72Q8NBR9 251 aa10.23□□□□□ -0.77
COL20A1-206ENST00000479501 HECTD1Q9ULT8 2610 aa10.23□□□□□ -0.77
COL20A1-206ENST00000479501 OXLD1Q5BKU9 147 aa10.23□□□□□ -0.77
COL20A1-206ENST00000479501 C3orf84H3BNL1 204 aa10.23□□□□□ -0.77
COL20A1-206ENST00000479501 UBE2AP49459 152 aa10.22□□□□□ -0.77
COL20A1-206ENST00000479501 KPRPQ5T749 579 aaPredicted RBP10.22□□□□□ -0.77
COL20A1-206ENST00000479501 MRPL55Q7Z7F7 128 aaKnown RBP10.22□□□□□ -0.77
COL20A1-206ENST00000479501 IGLV4-60A0A075B6I1 120 aa10.22□□□□□ -0.77
COL20A1-206ENST00000479501 SMIM26A0A096LP01 95 aa10.22□□□□□ -0.77
COL20A1-206ENST00000479501 HIGD2AQ9BW72 106 aa10.21□□□□□ -0.77
COL20A1-206ENST00000479501 KLK5Q9Y337 293 aaPredicted RBP10.21□□□□□ -0.77
COL20A1-206ENST00000479501 FAM19A5Q7Z5A7 132 aaPredicted RBP10.21□□□□□ -0.77
COL20A1-206ENST00000479501 RPL28P46779 137 aaKnown RBP10.2□□□□□ -0.78
COL20A1-206ENST00000479501 Q8IZM0 81 aa10.19□□□□□ -0.78
COL20A1-206ENST00000479501 NTM-AS1Q6ZSK4 140 aa10.19□□□□□ -0.78
COL20A1-206ENST00000479501 A0A087WZ39 114 aa10.19□□□□□ -0.78
COL20A1-206ENST00000479501 FSHBP01225 129 aa10.19□□□□□ -0.78
COL20A1-206ENST00000479501 TRAV7A0A075B6U4 112 aa10.17□□□□□ -0.78
COL20A1-206ENST00000479501 PRR4Q16378 134 aa10.17□□□□□ -0.78
COL20A1-206ENST00000479501 FHL3Q13643 280 aa10.17□□□□□ -0.78
COL20A1-206ENST00000479501 F8P00451 2351 aa10.17□□□□□ -0.78
COL20A1-206ENST00000479501 A0A096LNI7 61 aa10.16□□□□□ -0.78
COL20A1-206ENST00000479501 SMCPP49901 116 aaPredicted RBP10.16□□□□□ -0.78
COL20A1-206ENST00000479501 IGKV2-24A0A0C4DH68 120 aa10.16□□□□□ -0.78
COL20A1-206ENST00000479501 LOC107984640A0A0U1RRK4 108 aa10.16□□□□□ -0.78
COL20A1-206ENST00000479501 IGKV4-1P06312 121 aa10.16□□□□□ -0.78
COL20A1-206ENST00000479501 DNAH14Q0VDD8 3507 aa10.16□□□□□ -0.78
COL20A1-206ENST00000479501 C1orf195Q5TG92 126 aa10.15□□□□□ -0.78
COL20A1-206ENST00000479501 VCANP13611 3396 aa10.15□□□□□ -0.78
COL20A1-206ENST00000479501 SYCNQ0VAF6 134 aa10.15□□□□□ -0.78
COL20A1-206ENST00000479501 Q9UF83 564 aa10.15□□□□□ -0.78
COL20A1-206ENST00000479501 SERP1Q9Y6X1 66 aa10.15□□□□□ -0.79
COL20A1-206ENST00000479501 WFDC10BQ8IUB3 73 aa10.14□□□□□ -0.79
COL20A1-206ENST00000479501 PRO0461Q9UI25 63 aa10.14□□□□□ -0.79
COL20A1-206ENST00000479501 A0A087WYN8 130 aa10.14□□□□□ -0.79
COL20A1-206ENST00000479501 TRAV10A0A0B4J240 114 aa10.14□□□□□ -0.79
COL20A1-206ENST00000479501 COX17Q14061 63 aa10.14□□□□□ -0.79
COL20A1-206ENST00000479501 PPDPFQ9H3Y8 114 aa10.14□□□□□ -0.79
COL20A1-206ENST00000479501 CYSRT1A8MQ03 144 aa10.13□□□□□ -0.79
COL20A1-206ENST00000479501 Q8N814 137 aa10.12□□□□□ -0.79
COL20A1-206ENST00000479501 IGKV2-28A0A075B6P5 120 aa10.12□□□□□ -0.79
COL20A1-206ENST00000479501 TRBV7-7A0A0K0K1E9 115 aa10.12□□□□□ -0.79
COL20A1-206ENST00000479501 ZNF73O43830 326 aaPredicted RBP10.12□□□□□ -0.79
COL20A1-206ENST00000479501 IGKV2D-28P01615 120 aa10.12□□□□□ -0.79
COL20A1-206ENST00000479501 AKAP13Q12802 2813 aa10.12□□□□□ -0.79
COL20A1-206ENST00000479501 FLNAP21333 2647 aaKnown RBP10.12□□□□□ -0.79
COL20A1-206ENST00000479501 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.12□□□□□ -0.79
COL20A1-206ENST00000479501 DSPP15924 2871 aaKnown RBP10.11□□□□□ -0.79
COL20A1-206ENST00000479501 UNQ6190/PRO20217Q6UXQ8 127 aa10.11□□□□□ -0.79
COL20A1-206ENST00000479501 A0A1B0GUV1 79 aa10.11□□□□□ -0.79
COL20A1-206ENST00000479501 LINC00846Q9NV44 126 aa10.11□□□□□ -0.79
COL20A1-206ENST00000479501 SOSTDC1Q6X4U4 206 aa10.11□□□□□ -0.79
COL20A1-206ENST00000479501 WFDC13Q8IUB5 93 aa10.1□□□□□ -0.79
COL20A1-206ENST00000479501 M0R378 163 aa10.1□□□□□ -0.79
COL20A1-206ENST00000479501 NANOS2P60321 138 aaKnown RBP10.1□□□□□ -0.79
COL20A1-206ENST00000479501 A0A0J9YWU9 116 aa10.1□□□□□ -0.79
COL20A1-206ENST00000479501 FAM19A1Q7Z5A9 133 aa10.1□□□□□ -0.79
COL20A1-206ENST00000479501 RETNQ9HD89 108 aa10.1□□□□□ -0.79
COL20A1-206ENST00000479501 PRR3P79522 188 aaKnown RBP10.09□□□□□ -0.79
COL20A1-206ENST00000479501 Q8N3U1 123 aa10.09□□□□□ -0.79
COL20A1-206ENST00000479501 MUC7Q8TAX7 377 aa10.09□□□□□ -0.79
COL20A1-206ENST00000479501 CELA1Q9UNI1 258 aa10.09□□□□□ -0.79
COL20A1-206ENST00000479501 C9orf116Q5BN46 136 aaPredicted RBP10.09□□□□□ -0.79
COL20A1-206ENST00000479501 IGLV5-39A0A0G2JS06 123 aa10.08□□□□□ -0.8
COL20A1-206ENST00000479501 B9D2Q9BPU9 175 aa10.08□□□□□ -0.8
COL20A1-206ENST00000479501 CELSR3Q9NYQ7 3312 aa10.08□□□□□ -0.8
COL20A1-206ENST00000479501 A0A096LNT2 108 aa10.08□□□□□ -0.8
COL20A1-206ENST00000479501 A6NED7 52 aa10.08□□□□□ -0.8
COL20A1-206ENST00000479501 ITPR3Q14573 2671 aa10.07□□□□□ -0.8
COL20A1-206ENST00000479501 CFAP46Q8IYW2 2715 aa10.07□□□□□ -0.8
COL20A1-206ENST00000479501 MAP1AP78559 2803 aaPredicted RBP10.07□□□□□ -0.8
COL20A1-206ENST00000479501 LRCOL1A6NCL2 159 aa10.07□□□□□ -0.8
COL20A1-206ENST00000479501 C14orf177Q52M58 125 aa10.06□□□□□ -0.8
COL20A1-206ENST00000479501 Q6ZTC4 211 aa10.06□□□□□ -0.8
COL20A1-206ENST00000479501 FAM30AQ9NZY2 134 aa10.06□□□□□ -0.8
COL20A1-206ENST00000479501 DHRS4-AS1Q9P1J3 65 aa10.05□□□□□ -0.8
COL20A1-206ENST00000479501 IGHV3OR16-9A0A0B4J2B5 98 aa10.05□□□□□ -0.8
COL20A1-206ENST00000479501 LINC00337Q8N6G1 96 aa10.03□□□□□ -0.8
COL20A1-206ENST00000479501 IGLV5-45A0A087WSX0 123 aa10.02□□□□□ -0.81
COL20A1-206ENST00000479501 TRBV10-3A0A0K0K1G6 114 aa10.02□□□□□ -0.81
COL20A1-206ENST00000479501 USP24Q9UPU5 2620 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms