RNA–Protein interactions for RNA: ENST00000479176.5

FXR1-213, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-213ENST00000479176 HERC1Q15751 4861 aa6.67□□□□□ -1.34
FXR1-213ENST00000479176 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
FXR1-213ENST00000479176 RPL37AP61513 92 aaKnown RBP6.67□□□□□ -1.34
FXR1-213ENST00000479176 MAJINQ3KP22 176 aa6.67□□□□□ -1.34
FXR1-213ENST00000479176 PAPPA-AS1Q5QFB9 102 aa6.67□□□□□ -1.34
FXR1-213ENST00000479176 ERASQ7Z444 233 aa6.67□□□□□ -1.34
FXR1-213ENST00000479176 LINC00474Q9P2X8 69 aa6.67□□□□□ -1.34
FXR1-213ENST00000479176 FAT3Q8TDW7 4589 aa6.67□□□□□ -1.34
FXR1-213ENST00000479176 LOC107984640A0A0U1RRK4 108 aa6.66□□□□□ -1.34
FXR1-213ENST00000479176 LINC01549A6NIU2 74 aa6.66□□□□□ -1.34
FXR1-213ENST00000479176 KIAA0087Q14695 138 aa6.66□□□□□ -1.34
FXR1-213ENST00000479176 DPH3Q96FX2 82 aa6.66□□□□□ -1.34
FXR1-213ENST00000479176 MRPL35Q9NZE8 188 aaKnown RBP6.66□□□□□ -1.34
FXR1-213ENST00000479176 TRAPPC1Q9Y5R8 145 aa6.66□□□□□ -1.34
FXR1-213ENST00000479176 LRP1Q07954 4544 aaKnown RBP6.66□□□□□ -1.34
FXR1-213ENST00000479176 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.65□□□□□ -1.34
FXR1-213ENST00000479176 FA2HQ7L5A8 372 aa6.65□□□□□ -1.34
FXR1-213ENST00000479176 STPG4Q8N801 248 aa6.65□□□□□ -1.34
FXR1-213ENST00000479176 C18orf32Q8TCD1 76 aa6.65□□□□□ -1.34
FXR1-213ENST00000479176 URB1-AS1Q96HZ7 61 aa6.65□□□□□ -1.34
FXR1-213ENST00000479176 SCGB3A1Q96QR1 104 aa6.65□□□□□ -1.34
FXR1-213ENST00000479176 NDUFA1O15239 70 aa6.64□□□□□ -1.35
FXR1-213ENST00000479176 SEC11AP67812 179 aa6.64□□□□□ -1.35
FXR1-213ENST00000479176 SMCO4Q9NRQ5 59 aa6.64□□□□□ -1.35
FXR1-213ENST00000479176 A0A096LNJ9 63 aa6.63□□□□□ -1.35
FXR1-213ENST00000479176 A0A0J9YXV3 536 aa6.63□□□□□ -1.35
FXR1-213ENST00000479176 HNRNPA3P51991 378 aaKnown RBP6.63□□□□□ -1.35
FXR1-213ENST00000479176 HERVK_113P63121 156 aa6.63□□□□□ -1.35
FXR1-213ENST00000479176 C10orf25Q5T742 122 aa6.63□□□□□ -1.35
FXR1-213ENST00000479176 UNQ6190/PRO20217Q6UXQ8 127 aa6.63□□□□□ -1.35
FXR1-213ENST00000479176 C6orf48Q9UBA6 75 aa6.63□□□□□ -1.35
FXR1-213ENST00000479176 IGLV5-45A0A087WSX0 123 aa6.62□□□□□ -1.35
FXR1-213ENST00000479176 TLX1NBP0CAT3 122 aa6.62□□□□□ -1.35
FXR1-213ENST00000479176 GAGE2BQ13066 116 aa6.62□□□□□ -1.35
FXR1-213ENST00000479176 KRTAP4-11Q9BYQ6 195 aa6.62□□□□□ -1.35
FXR1-213ENST00000479176 CDKN2A-AS1Q9UH64 79 aa6.62□□□□□ -1.35
FXR1-213ENST00000479176 TINCRA0A1B0GVN0 87 aa6.61□□□□□ -1.35
FXR1-213ENST00000479176 KRTAP29-1A8MX34 341 aaPredicted RBP6.61□□□□□ -1.35
FXR1-213ENST00000479176 LINC00614P0C842 121 aa6.61□□□□□ -1.35
FXR1-213ENST00000479176 RPL18AQ02543 176 aaKnown RBP6.61□□□□□ -1.35
FXR1-213ENST00000479176 CBLN2Q8IUK8 224 aa6.61□□□□□ -1.35
FXR1-213ENST00000479176 SLC7A5P1Q8MH63 180 aa6.61□□□□□ -1.35
FXR1-213ENST00000479176 C7orf33Q8WU49 177 aa6.61□□□□□ -1.35
FXR1-213ENST00000479176 CST9LQ9H4G1 147 aa6.61□□□□□ -1.35
FXR1-213ENST00000479176 GEMIN7Q9H840 131 aaKnown RBP6.61□□□□□ -1.35
FXR1-213ENST00000479176 TRBV30A0A0K0K1B3 111 aa6.6□□□□□ -1.35
FXR1-213ENST00000479176 A0A1W2PNN7 141 aa6.6□□□□□ -1.35
FXR1-213ENST00000479176 PMVKQ15126 192 aa6.6□□□□□ -1.35
FXR1-213ENST00000479176 PDZD11Q5EBL8 140 aa6.6□□□□□ -1.35
FXR1-213ENST00000479176 C2orf82Q6UX34 121 aa6.6□□□□□ -1.35
FXR1-213ENST00000479176 Q8IZM0 81 aa6.6□□□□□ -1.35
FXR1-213ENST00000479176 HBDP02042 147 aa6.59□□□□□ -1.35
FXR1-213ENST00000479176 RAB5BP61020 215 aa6.59□□□□□ -1.35
FXR1-213ENST00000479176 PRR3P79522 188 aaKnown RBP6.59□□□□□ -1.35
FXR1-213ENST00000479176 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
FXR1-213ENST00000479176 Q6ZRP5 223 aa6.59□□□□□ -1.35
FXR1-213ENST00000479176 LINC00469Q8N7U9 141 aa6.59□□□□□ -1.35
FXR1-213ENST00000479176 PACRGQ96M98 296 aaPredicted RBP6.59□□□□□ -1.35
FXR1-213ENST00000479176 SMIM1B2RUZ4 78 aa6.58□□□□□ -1.36
FXR1-213ENST00000479176 PRSS2P07478 247 aa6.58□□□□□ -1.36
FXR1-213ENST00000479176 PMCHL1Q16048 86 aa6.58□□□□□ -1.36
FXR1-213ENST00000479176 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
FXR1-213ENST00000479176 TOMM7Q9P0U1 55 aa6.58□□□□□ -1.36
FXR1-213ENST00000479176 NDUFC2-KCTD14E9PQ53 114 aa6.57□□□□□ -1.36
FXR1-213ENST00000479176 OXTP01178 125 aa6.57□□□□□ -1.36
FXR1-213ENST00000479176 IGLC3P0DOY3 106 aa6.57□□□□□ -1.36
FXR1-213ENST00000479176 CKS1BP61024 79 aa6.57□□□□□ -1.36
FXR1-213ENST00000479176 C6orf226Q5I0X4 101 aa6.57□□□□□ -1.36
FXR1-213ENST00000479176 ATP5LO75964 103 aa6.56□□□□□ -1.36
FXR1-213ENST00000479176 CXCL5P42830 114 aa6.56□□□□□ -1.36
FXR1-213ENST00000479176 CHCHD1Q96BP2 118 aaKnown RBP6.56□□□□□ -1.36
FXR1-213ENST00000479176 FAM168BA1KXE4 195 aa6.55□□□□□ -1.36
FXR1-213ENST00000479176 F8VRH5 84 aa6.55□□□□□ -1.36
FXR1-213ENST00000479176 GAGE2EQ4V326 116 aa6.55□□□□□ -1.36
FXR1-213ENST00000479176 KRTAP7-1Q8IUC3 87 aa6.55□□□□□ -1.36
FXR1-213ENST00000479176 COX7B2Q8TF08 81 aa6.55□□□□□ -1.36
FXR1-213ENST00000479176 GAGE2DQ9UEU5 116 aa6.55□□□□□ -1.36
FXR1-213ENST00000479176 H3BRM9 83 aa6.54□□□□□ -1.36
FXR1-213ENST00000479176 TRGC2P03986 189 aa6.54□□□□□ -1.36
FXR1-213ENST00000479176 SPINK8P0C7L1 97 aa6.54□□□□□ -1.36
FXR1-213ENST00000479176 NDUFA6P56556 154 aa6.54□□□□□ -1.36
FXR1-213ENST00000479176 C9orf129Q5T035 196 aaKnown RBP6.54□□□□□ -1.36
FXR1-213ENST00000479176 PHF5AQ7RTV0 110 aaKnown RBP6.54□□□□□ -1.36
FXR1-213ENST00000479176 IGLV5-39A0A0G2JS06 123 aa6.53□□□□□ -1.36
FXR1-213ENST00000479176 COLCA2A8K830 154 aa6.53□□□□□ -1.36
FXR1-213ENST00000479176 ZNF22P17026 224 aaPredicted RBP6.53□□□□□ -1.36
FXR1-213ENST00000479176 TNXBP22105 4242 aa6.53□□□□□ -1.36
FXR1-213ENST00000479176 SRSF9Q13242 221 aaKnown RBP eCLIP6.52□□□□□ -1.37
FXR1-213ENST00000479176 FAM19A5Q7Z5A7 132 aaPredicted RBP6.52□□□□□ -1.37
FXR1-213ENST00000479176 BAGE3Q86Y29 109 aa6.52□□□□□ -1.37
FXR1-213ENST00000479176 KRTAP4-2Q9BYR5 136 aa6.52□□□□□ -1.37
FXR1-213ENST00000479176 PSORS1C2Q9UIG4 136 aa6.52□□□□□ -1.37
FXR1-213ENST00000479176 TRAV12-1A0A0B4J245 112 aa6.51□□□□□ -1.37
FXR1-213ENST00000479176 C11orf86A6NJI1 115 aa6.51□□□□□ -1.37
FXR1-213ENST00000479176 SPINK6Q6UWN8 80 aa6.51□□□□□ -1.37
FXR1-213ENST00000479176 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
FXR1-213ENST00000479176 M0QXV9 152 aa6.5□□□□□ -1.37
FXR1-213ENST00000479176 HSBP1O75506 76 aa6.5□□□□□ -1.37
FXR1-213ENST00000479176 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
FXR1-213ENST00000479176 IFI27L1Q96BM0 104 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms