RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 C6orf99Q4VX62 202 aa14.71□□□□□ -0.05
SDF4-206ENST00000478938 CUBNO60494 3623 aa14.71□□□□□ -0.05
SDF4-206ENST00000478938 CSMD2Q7Z408 3487 aa14.71□□□□□ -0.06
SDF4-206ENST00000478938 TMEM89A2RUT3 159 aa14.71□□□□□ -0.06
SDF4-206ENST00000478938 A6NDX4 124 aa14.71□□□□□ -0.06
SDF4-206ENST00000478938 ZNF561-AS1K7EIQ3 104 aa14.7□□□□□ -0.06
SDF4-206ENST00000478938 IGHV4-38-2P0DP08 117 aa14.7□□□□□ -0.06
SDF4-206ENST00000478938 IGLV4-60A0A075B6I1 120 aa14.7□□□□□ -0.06
SDF4-206ENST00000478938 PLAC8L1A1L4L8 177 aa14.7□□□□□ -0.06
SDF4-206ENST00000478938 BBC3Q96PG8 261 aaPredicted RBP14.7□□□□□ -0.06
SDF4-206ENST00000478938 A8MTW9 85 aa14.69□□□□□ -0.06
SDF4-206ENST00000478938 C6orf226Q5I0X4 101 aa14.69□□□□□ -0.06
SDF4-206ENST00000478938 BPY2O14599 106 aa14.69□□□□□ -0.06
SDF4-206ENST00000478938 A0A1W2PPR1 153 aa14.68□□□□□ -0.06
SDF4-206ENST00000478938 FUSP35637 526 aaKnown RBP eCLIP14.68□□□□□ -0.065e-8■■■□□ 16.8
SDF4-206ENST00000478938 PRR15Q8IV56 129 aa14.68□□□□□ -0.06
SDF4-206ENST00000478938 C6orf223Q8N319 242 aa14.68□□□□□ -0.06
SDF4-206ENST00000478938 PRYO14603 147 aa14.67□□□□□ -0.06
SDF4-206ENST00000478938 MAP1AP78559 2803 aaPredicted RBP14.67□□□□□ -0.06
SDF4-206ENST00000478938 LOC100131303A0A0U1RQF7 123 aa14.66□□□□□ -0.06
SDF4-206ENST00000478938 LINC00575Q6W349 94 aa14.66□□□□□ -0.06
SDF4-206ENST00000478938 Q6ZTC4 211 aa14.66□□□□□ -0.06
SDF4-206ENST00000478938 LRCOL1A6NCL2 159 aa14.64□□□□□ -0.07
SDF4-206ENST00000478938 GNLYP22749 145 aa14.64□□□□□ -0.07
SDF4-206ENST00000478938 NOTCH3Q9UM47 2321 aa14.64□□□□□ -0.07
SDF4-206ENST00000478938 INSP01308 110 aa14.63□□□□□ -0.07
SDF4-206ENST00000478938 CACNA1AO00555 2505 aa14.63□□□□□ -0.07
SDF4-206ENST00000478938 Q8N9L7 120 aa14.63□□□□□ -0.07
SDF4-206ENST00000478938 ATRXP46100 2492 aa14.62□□□□□ -0.07
SDF4-206ENST00000478938 CHD8Q9HCK8 2581 aa14.62□□□□□ -0.07
SDF4-206ENST00000478938 FBXL19-AS1Q494R0 122 aa14.61□□□□□ -0.07
SDF4-206ENST00000478938 Q6ZRU5 148 aa14.61□□□□□ -0.07
SDF4-206ENST00000478938 Q8NDZ9 215 aa14.6□□□□□ -0.07
SDF4-206ENST00000478938 UBE2E2Q96LR5 201 aa14.6□□□□□ -0.07
SDF4-206ENST00000478938 ERC2-IT1O76042 136 aa14.59□□□□□ -0.07
SDF4-206ENST00000478938 MUC7Q8TAX7 377 aa14.59□□□□□ -0.07
SDF4-206ENST00000478938 DAD1P61803 113 aa14.59□□□□□ -0.07
SDF4-206ENST00000478938 C11orf44Q8N8P7 122 aa14.59□□□□□ -0.07
SDF4-206ENST00000478938 HIGD2AQ9BW72 106 aa14.59□□□□□ -0.07
SDF4-206ENST00000478938 C9orf66Q5T8R8 295 aa14.58□□□□□ -0.08
SDF4-206ENST00000478938 NCOR2Q9Y618 2525 aa14.58□□□□□ -0.08
SDF4-206ENST00000478938 Q6ZQY7 126 aa14.57□□□□□ -0.08
SDF4-206ENST00000478938 DYNLRB2Q8TF09 96 aa14.57□□□□□ -0.08
SDF4-206ENST00000478938 MAP6D1Q9H9H5 199 aa14.56□□□□□ -0.08
SDF4-206ENST00000478938 CD164L2Q6UWJ8 174 aa14.55□□□□□ -0.08
SDF4-206ENST00000478938 A0A1W2PRX2 142 aa14.55□□□□□ -0.08
SDF4-206ENST00000478938 Q6ZRP5 223 aa14.54□□□□□ -0.08
SDF4-206ENST00000478938 OCR1Q9BZK8 76 aa14.54□□□□□ -0.08
SDF4-206ENST00000478938 RETNQ9HD89 108 aa14.54□□□□□ -0.08
SDF4-206ENST00000478938 CSPG4Q6UVK1 2322 aa14.54□□□□□ -0.08
SDF4-206ENST00000478938 LINC00959A0A1B0GUT2 108 aa14.53□□□□□ -0.08
SDF4-206ENST00000478938 C1orf158Q8N1D5 194 aa14.53□□□□□ -0.08
SDF4-206ENST00000478938 SLURP1P55000 103 aa14.53□□□□□ -0.08
SDF4-206ENST00000478938 DEFB136Q30KP8 78 aa14.53□□□□□ -0.08
SDF4-206ENST00000478938 C9orf116Q5BN46 136 aaPredicted RBP14.53□□□□□ -0.08
SDF4-206ENST00000478938 PSPHP1O15172 72 aa14.52□□□□□ -0.09
SDF4-206ENST00000478938 PDE6GP18545 87 aa14.52□□□□□ -0.09
SDF4-206ENST00000478938 LINC01006Q8NI28 216 aa14.52□□□□□ -0.09
SDF4-206ENST00000478938 hDV103S1A0JD37 113 aa14.51□□□□□ -0.09
SDF4-206ENST00000478938 KHDC1LQ5JSQ8 128 aa14.51□□□□□ -0.09
SDF4-206ENST00000478938 CLPSL2Q6UWE3 100 aa14.5□□□□□ -0.09
SDF4-206ENST00000478938 NOP10Q9NPE3 64 aaKnown RBP14.5□□□□□ -0.09
SDF4-206ENST00000478938 ADORA2A-AS1P86434 159 aa14.49□□□□□ -0.09
SDF4-206ENST00000478938 Q8IZM0 81 aa14.49□□□□□ -0.09
SDF4-206ENST00000478938 IGKV4-1P06312 121 aa14.49□□□□□ -0.09
SDF4-206ENST00000478938 C18orf65Q6ZTR6 163 aa14.48□□□□□ -0.09
SDF4-206ENST00000478938 TRGV2A0A075B6R0 118 aa14.47□□□□□ -0.09
SDF4-206ENST00000478938 TRBV6-8A0A0A6YYG3 113 aa14.47□□□□□ -0.09
SDF4-206ENST00000478938 WNK1Q9H4A3 2382 aa14.47□□□□□ -0.09
SDF4-206ENST00000478938 Q1T7F1 81 aa14.46□□□□□ -0.09
SDF4-206ENST00000478938 CD164Q04900 197 aa14.45□□□□□ -0.1
SDF4-206ENST00000478938 IGHV4-61A0A0C4DH41 118 aa14.44□□□□□ -0.1
SDF4-206ENST00000478938 IGHV4-59P01825 116 aa14.44□□□□□ -0.1
SDF4-206ENST00000478938 LINC01356Q8N9X3 169 aa14.44□□□□□ -0.1
SDF4-206ENST00000478938 C1orf64Q8NEQ6 169 aa14.44□□□□□ -0.1
SDF4-206ENST00000478938 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.43□□□□□ -0.1
SDF4-206ENST00000478938 A8MU10 97 aa14.42□□□□□ -0.1
SDF4-206ENST00000478938 LINC00269Q8N2A0 174 aa14.41□□□□□ -0.1
SDF4-206ENST00000478938 IGHV4-31P0DP07 118 aa14.4□□□□□ -0.1
SDF4-206ENST00000478938 TRGV4A0A0C4DH28 118 aa14.4□□□□□ -0.1
SDF4-206ENST00000478938 CELA1Q9UNI1 258 aa14.4□□□□□ -0.1
SDF4-206ENST00000478938 CR1P17927 2039 aa14.39□□□□□ -0.11
SDF4-206ENST00000478938 TRAV22A0A0B4J277 110 aa14.39□□□□□ -0.11
SDF4-206ENST00000478938 FAM30AQ9NZY2 134 aa14.39□□□□□ -0.11
SDF4-206ENST00000478938 KIAA0087Q14695 138 aa14.38□□□□□ -0.11
SDF4-206ENST00000478938 LINC00612Q8N6U2 182 aa14.38□□□□□ -0.11
SDF4-206ENST00000478938 ITPR1Q14643 2758 aa14.38□□□□□ -0.11
SDF4-206ENST00000478938 C10orf25Q5T742 122 aa14.37□□□□□ -0.11
SDF4-206ENST00000478938 NBPF19A0A087WUL8 3843 aa14.37□□□□□ -0.11
SDF4-206ENST00000478938 CELSR2Q9HCU4 2923 aa14.37□□□□□ -0.11
SDF4-206ENST00000478938 PLA2G2AP14555 144 aa14.37□□□□□ -0.11
SDF4-206ENST00000478938 COX17Q14061 63 aa14.37□□□□□ -0.11
SDF4-206ENST00000478938 STHQ8IWL8 128 aa14.37□□□□□ -0.11
SDF4-206ENST00000478938 SPG11Q96JI7 2443 aa14.36□□□□□ -0.11
SDF4-206ENST00000478938 ODF3L2Q3SX64 289 aa14.35□□□□□ -0.11
SDF4-206ENST00000478938 COX7BP24311 80 aa14.33□□□□□ -0.11
SDF4-206ENST00000478938 IGLV6-57P01721 117 aa14.33□□□□□ -0.12
SDF4-206ENST00000478938 AKAP9Q99996 3911 aa14.33□□□□□ -0.12
SDF4-206ENST00000478938 PRB2P02812 416 aaPredicted RBP14.32□□□□□ -0.12
SDF4-206ENST00000478938 DEFB112Q30KQ8 113 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 225.2 ms