RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 MAP1LC3AQ9H492 121 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 NXT2Q9NPJ8 142 aaKnown RBP2.57□□□□□ -2
CCDC171-207ENST00000478913 C8orf17Q9NRJ1 99 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 HIGD1AQ9Y241 93 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 KLF12Q9Y4X4 402 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 HLA-DRB4X5D2U9 266 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 TRBV6-1A0A0K0K1D8 114 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 TMEM189A5PLL7 270 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 LINC01549A6NIU2 74 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 H7C1H1 209 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 DPM2O94777 84 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 APOMO95445 188 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 LTAP01374 205 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 IGKCP01834 107 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 IGHG2P01859 326 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 RNASE2P10153 161 aaKnown RBP2.56□□□□□ -2
CCDC171-207ENST00000478913 DEFA4P12838 97 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 ORM2P19652 201 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 PLNP26678 52 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 LGALS7P47929 136 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 TTC32Q5I0X7 151 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 WDR82Q6UXN9 313 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 LINC00305Q7Z4B0 112 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 PRNTQ86SH4 94 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 ATP6V0E2Q8NHE4 81 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 IFI27L1Q96BM0 104 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 TRGV9Q99603 122 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 ANAPC13Q9BS18 74 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 GTSF1LQ9H1H1 148 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 SPANXCQ9NY87 97 aa2.56□□□□□ -2
CCDC171-207ENST00000478913 TRBV20-1A0A075B6N2 111 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 IGHV7-4-1A0A0J9YVY3 117 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 SMIM9A6NGZ8 99 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 NDUFC2-KCTD14E9PQ53 114 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.55□□□□□ -2
CCDC171-207ENST00000478913 IGHV3-11P01762 117 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 IGHV3-7P01780 117 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 TCRAP04437 139 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 CRYGAP11844 174 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 HTN3P15516 51 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 FCER1GP30273 86 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 MEF2CQ06413 473 aaPredicted RBP2.55□□□□□ -2
CCDC171-207ENST00000478913 RPL39P5Q59GN2 51 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 FOXI2Q6ZQN5 318 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 Q86TA4 180 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 VKORC1L1Q8N0U8 176 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 TMEM75Q8N9X5 138 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 NHP2Q9NX24 153 aaKnown RBP2.55□□□□□ -2
CCDC171-207ENST00000478913 TMEM14CQ9P0S9 112 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 UFC1Q9Y3C8 167 aa2.55□□□□□ -2
CCDC171-207ENST00000478913 SMIM26A0A096LP01 95 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 LOC389332A0A1B0GUA5 103 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 C19orf71A6NCJ1 209 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 A8MWV9 139 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 D6R8Y8 96 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 H3BMG7 143 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 C15orf65H3BRN8 121 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 SNCGO76070 127 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 PPP1R17O96001 155 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 SPINK8P0C7L1 97 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 SAA2P0DJI9 122 aaPredicted RBP2.54□□□□□ -2
CCDC171-207ENST00000478913 SCGB1C2P0DMR2 95 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 PYYP10082 97 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 EVI2AP22794 236 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 GNG5P63218 68 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 SCGB1D4Q6XE38 83 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 C2orf91Q6ZV80 131 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 GOLT1AQ6ZVE7 132 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 GATD1Q8NB37 220 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 TMEM167AQ8TBQ9 72 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 PPDPFLQ8WWR9 84 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 FXYD5Q96DB9 178 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 KAAG1Q9UBP8 84 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 LINC00588Q9Y4M8 146 aa2.54□□□□□ -2
CCDC171-207ENST00000478913 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
CCDC171-207ENST00000478913 TRAV3A0A0B4J244 114 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 TRAV5A0A0B4J249 113 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 LOC107984156A0A0G2JMH3 177 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 K7EMI3 77 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 RBP4P02753 201 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 TFF1P04155 84 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 SAA1P0DJI8 122 aaPredicted RBP2.53□□□□□ -2
CCDC171-207ENST00000478913 RPL7P18124 248 aaKnown RBP2.53□□□□□ -2
CCDC171-207ENST00000478913 IFI27P40305 119 aaPredicted RBP2.53□□□□□ -2
CCDC171-207ENST00000478913 RPL27AP46776 148 aaKnown RBP2.53□□□□□ -2
CCDC171-207ENST00000478913 PDE6HQ13956 83 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 RRN3P1Q2M238 152 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 GDF5OSQ5U4N7 250 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 FAM104BQ5XKR9 115 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 ZNF826PQ6ZT77 177 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 ARL17AQ8IVW1 177 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 MIR7-3HGQ8N6C7 128 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 C5orf56Q8N8D9 126 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 Q8NAQ8 132 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 OR11H6Q8NGC7 330 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 FAM167A-AS1Q96KT0 104 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 NDUFA4L2Q9NRX3 87 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 C21orf62Q9NYP8 219 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms