RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 F8VRH5 84 aa6.36□□□□□ -1.39
HDAC8-217ENST00000478743 IFITM3Q01628 133 aa6.36□□□□□ -1.39
HDAC8-217ENST00000478743 Q8NDZ9 215 aa6.36□□□□□ -1.39
HDAC8-217ENST00000478743 TMEM18Q96B42 140 aa6.36□□□□□ -1.39
HDAC8-217ENST00000478743 SMIM12Q96EX1 92 aa6.36□□□□□ -1.39
HDAC8-217ENST00000478743 GNB1LQ9BYB4 327 aa6.36□□□□□ -1.39
HDAC8-217ENST00000478743 IGLV4-3A0A075B6K6 122 aa6.35□□□□□ -1.39
HDAC8-217ENST00000478743 IGLV9-49A0A0B4J1Y8 123 aa6.35□□□□□ -1.39
HDAC8-217ENST00000478743 LINC01561Q8N1V8 128 aa6.35□□□□□ -1.39
HDAC8-217ENST00000478743 ALKBH7Q9BT30 221 aaPredicted RBP6.35□□□□□ -1.39
HDAC8-217ENST00000478743 TMEM191AQ9H0A3 160 aa6.35□□□□□ -1.39
HDAC8-217ENST00000478743 GIPP09681 153 aaPredicted RBP6.34□□□□□ -1.39
HDAC8-217ENST00000478743 GNG13Q9P2W3 67 aa6.34□□□□□ -1.39
HDAC8-217ENST00000478743 FXYD6-FXYD2A0A087WZ82 144 aa6.33□□□□□ -1.4
HDAC8-217ENST00000478743 VPREB1P12018 145 aa6.33□□□□□ -1.4
HDAC8-217ENST00000478743 Q6ZN92 141 aa6.33□□□□□ -1.4
HDAC8-217ENST00000478743 TCAPO15273 167 aa6.32□□□□□ -1.4
HDAC8-217ENST00000478743 RPL37P61927 97 aaKnown RBP6.32□□□□□ -1.4
HDAC8-217ENST00000478743 LINC00846Q9NV44 126 aa6.32□□□□□ -1.4
HDAC8-217ENST00000478743 IGLV6-57P01721 117 aa6.31□□□□□ -1.4
HDAC8-217ENST00000478743 RAB5BP61020 215 aa6.31□□□□□ -1.4
HDAC8-217ENST00000478743 LINC00483Q53H64 154 aa6.31□□□□□ -1.4
HDAC8-217ENST00000478743 FAM231DQ6ZW35 169 aa6.31□□□□□ -1.4
HDAC8-217ENST00000478743 ZNF706Q9Y5V0 76 aaPredicted RBP6.31□□□□□ -1.4
HDAC8-217ENST00000478743 OCC1Q8TAD7 63 aa6.3□□□□□ -1.4
HDAC8-217ENST00000478743 BIN3Q9NQY0 253 aa6.3□□□□□ -1.4
HDAC8-217ENST00000478743 MANBALQ9NQG1 85 aa6.29□□□□□ -1.4
HDAC8-217ENST00000478743 H2AFB1P0C5Y9 115 aa6.28□□□□□ -1.4
HDAC8-217ENST00000478743 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
HDAC8-217ENST00000478743 MRPL51Q4U2R6 128 aaKnown RBP6.28□□□□□ -1.4
HDAC8-217ENST00000478743 SMCR5Q8TEV8 140 aa6.28□□□□□ -1.4
HDAC8-217ENST00000478743 MED9Q9NWA0 146 aa6.28□□□□□ -1.4
HDAC8-217ENST00000478743 PPP1R2P9O14990 202 aa6.27□□□□□ -1.41
HDAC8-217ENST00000478743 GATCO43716 136 aaKnown RBP6.27□□□□□ -1.41
HDAC8-217ENST00000478743 GAGE2AQ6NT46 116 aa6.27□□□□□ -1.41
HDAC8-217ENST00000478743 TMEM141Q96I45 108 aa6.27□□□□□ -1.41
HDAC8-217ENST00000478743 SMIM2Q9BVW6 85 aa6.27□□□□□ -1.41
HDAC8-217ENST00000478743 EIF5A2Q9GZV4 153 aaKnown RBP6.27□□□□□ -1.41
HDAC8-217ENST00000478743 GEMIN7Q9H840 131 aaKnown RBP6.27□□□□□ -1.41
HDAC8-217ENST00000478743 CDKN2A-AS1Q9UH64 79 aa6.27□□□□□ -1.41
HDAC8-217ENST00000478743 A0A1B0GUT8 65 aa6.26□□□□□ -1.41
HDAC8-217ENST00000478743 IFI27P40305 119 aaPredicted RBP6.26□□□□□ -1.41
HDAC8-217ENST00000478743 SSBP3-AS1Q7Z2R9 100 aa6.26□□□□□ -1.41
HDAC8-217ENST00000478743 TIMM17AQ99595 171 aa6.26□□□□□ -1.41
HDAC8-217ENST00000478743 CHTOPQ9Y3Y2 248 aaKnown RBP6.26□□□□□ -1.41
HDAC8-217ENST00000478743 HIGD1CA8MV81 97 aa6.25□□□□□ -1.41
HDAC8-217ENST00000478743 TEX43Q6ZNM6 134 aa6.25□□□□□ -1.41
HDAC8-217ENST00000478743 A8MWL6 223 aa6.24□□□□□ -1.41
HDAC8-217ENST00000478743 CXCL5P42830 114 aa6.24□□□□□ -1.41
HDAC8-217ENST00000478743 LINC01551Q86U37 167 aa6.24□□□□□ -1.41
HDAC8-217ENST00000478743 BORCS7Q96B45 105 aa6.24□□□□□ -1.41
HDAC8-217ENST00000478743 PYGO1Q9Y3Y4 419 aa6.24□□□□□ -1.41
HDAC8-217ENST00000478743 SMIM1B2RUZ4 78 aa6.23□□□□□ -1.41
HDAC8-217ENST00000478743 ERC2-IT1O76042 136 aa6.23□□□□□ -1.41
HDAC8-217ENST00000478743 PPP1R17O96001 155 aa6.23□□□□□ -1.41
HDAC8-217ENST00000478743 NPYP01303 97 aa6.23□□□□□ -1.41
HDAC8-217ENST00000478743 AMELXQ99217 191 aa6.23□□□□□ -1.41
HDAC8-217ENST00000478743 C20orf78Q9BR46 151 aa6.23□□□□□ -1.41
HDAC8-217ENST00000478743 MDN1Q9NU22 5596 aa6.23□□□□□ -1.41
HDAC8-217ENST00000478743 TRBV24-1A0A075B6N3 115 aa6.22□□□□□ -1.41
HDAC8-217ENST00000478743 PDE6DO43924 150 aa6.22□□□□□ -1.41
HDAC8-217ENST00000478743 NPSP0C0P6 89 aa6.22□□□□□ -1.41
HDAC8-217ENST00000478743 AKAP14Q86UN6 197 aa6.22□□□□□ -1.41
HDAC8-217ENST00000478743 UMAD1C9J7I0 102 aa6.21□□□□□ -1.42
HDAC8-217ENST00000478743 ARPC5O15511 151 aa6.21□□□□□ -1.42
HDAC8-217ENST00000478743 RAB14P61106 215 aa6.21□□□□□ -1.42
HDAC8-217ENST00000478743 FAM19A3Q7Z5A8 133 aa6.21□□□□□ -1.42
HDAC8-217ENST00000478743 COX7B2Q8TF08 81 aa6.21□□□□□ -1.42
HDAC8-217ENST00000478743 C2orf88Q9BSF0 95 aa6.21□□□□□ -1.42
HDAC8-217ENST00000478743 SND1-IT1Q9HBX3 110 aa6.21□□□□□ -1.42
HDAC8-217ENST00000478743 KMT2DO14686 5537 aa6.2□□□□□ -1.42
HDAC8-217ENST00000478743 PFN2P35080 140 aa6.2□□□□□ -1.42
HDAC8-217ENST00000478743 FAM104BQ5XKR9 115 aa6.2□□□□□ -1.42
HDAC8-217ENST00000478743 C2orf66Q6UXQ4 117 aa6.2□□□□□ -1.42
HDAC8-217ENST00000478743 CT83Q5H943 113 aa6.19□□□□□ -1.42
HDAC8-217ENST00000478743 C9orf153Q5TBE3 101 aa6.19□□□□□ -1.42
HDAC8-217ENST00000478743 HRCT1Q6UXD1 115 aa6.19□□□□□ -1.42
HDAC8-217ENST00000478743 KIAA1644Q3SXP7 199 aa6.18□□□□□ -1.42
HDAC8-217ENST00000478743 D6R8Y8 96 aa6.17□□□□□ -1.42
HDAC8-217ENST00000478743 CKS2P33552 79 aa6.17□□□□□ -1.42
HDAC8-217ENST00000478743 LGALS3P17931 250 aaKnown RBP6.16□□□□□ -1.42
HDAC8-217ENST00000478743 SPRR1AP35321 89 aa6.16□□□□□ -1.42
HDAC8-217ENST00000478743 KRTAP3-3Q9BYR6 98 aa6.16□□□□□ -1.42
HDAC8-217ENST00000478743 KRTAP3-2Q9BYR7 98 aa6.16□□□□□ -1.42
HDAC8-217ENST00000478743 SMLR1H3BR10 107 aa6.15□□□□□ -1.42
HDAC8-217ENST00000478743 HERVK_113P63121 156 aa6.15□□□□□ -1.42
HDAC8-217ENST00000478743 RIGQ13278 110 aa6.15□□□□□ -1.42
HDAC8-217ENST00000478743 LINC00862A6NCI5 91 aa6.14□□□□□ -1.43
HDAC8-217ENST00000478743 SPINK8P0C7L1 97 aa6.14□□□□□ -1.43
HDAC8-217ENST00000478743 RPL24P83731 157 aaKnown RBP6.14□□□□□ -1.43
HDAC8-217ENST00000478743 VCX2Q9H322 139 aa6.14□□□□□ -1.43
HDAC8-217ENST00000478743 LOC389332A0A1B0GUA5 103 aa6.13□□□□□ -1.43
HDAC8-217ENST00000478743 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
HDAC8-217ENST00000478743 PDZD11Q5EBL8 140 aa6.13□□□□□ -1.43
HDAC8-217ENST00000478743 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
HDAC8-217ENST00000478743 IGIPA6NJ69 53 aa6.12□□□□□ -1.43
HDAC8-217ENST00000478743 PRYO14603 147 aa6.12□□□□□ -1.43
HDAC8-217ENST00000478743 S100ZQ8WXG8 99 aa6.12□□□□□ -1.43
HDAC8-217ENST00000478743 Q9BRP9 147 aa6.12□□□□□ -1.43
HDAC8-217ENST00000478743 LIMD2Q9BT23 127 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms