RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 Q5BKY6 102 aa3.11□□□□□ -1.91
ITGA4-209ENST00000478440 GATD1Q8NB37 220 aa3.11□□□□□ -1.91
ITGA4-209ENST00000478440 ST20Q9HBF5 79 aa3.11□□□□□ -1.91
ITGA4-209ENST00000478440 MED9Q9NWA0 146 aa3.11□□□□□ -1.91
ITGA4-209ENST00000478440 TMEM242Q9NWH2 141 aa3.11□□□□□ -1.91
ITGA4-209ENST00000478440 FAT3Q8TDW7 4589 aa3.1□□□□□ -1.91
ITGA4-209ENST00000478440 PKHD1L1Q86WI1 4243 aa3.1□□□□□ -1.91
ITGA4-209ENST00000478440 A0A1W2PNN7 141 aa3.1□□□□□ -1.91
ITGA4-209ENST00000478440 RAB19A4D1S5 217 aa3.1□□□□□ -1.91
ITGA4-209ENST00000478440 C19orf71A6NCJ1 209 aa3.1□□□□□ -1.91
ITGA4-209ENST00000478440 RNASE13Q5GAN3 156 aaKnown RBP3.1□□□□□ -1.91
ITGA4-209ENST00000478440 C5orf38Q86SI9 138 aa3.1□□□□□ -1.91
ITGA4-209ENST00000478440 IMMP2LQ96T52 175 aa3.1□□□□□ -1.91
ITGA4-209ENST00000478440 RPP21Q9H633 154 aaKnown RBP3.1□□□□□ -1.91
ITGA4-209ENST00000478440 M0QXV9 152 aa3.09□□□□□ -1.91
ITGA4-209ENST00000478440 NDUFA1O15239 70 aa3.09□□□□□ -1.91
ITGA4-209ENST00000478440 PDE6DO43924 150 aa3.09□□□□□ -1.91
ITGA4-209ENST00000478440 CTRLP40313 264 aa3.09□□□□□ -1.91
ITGA4-209ENST00000478440 CCL20P78556 96 aa3.09□□□□□ -1.91
ITGA4-209ENST00000478440 NUP35Q8NFH5 326 aa3.09□□□□□ -1.91
ITGA4-209ENST00000478440 ORAOV1Q8WV07 137 aa3.09□□□□□ -1.91
ITGA4-209ENST00000478440 MBD3L1Q8WWY6 194 aa3.09□□□□□ -1.91
ITGA4-209ENST00000478440 SMIM12Q96EX1 92 aa3.09□□□□□ -1.91
ITGA4-209ENST00000478440 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.08□□□□□ -1.92
ITGA4-209ENST00000478440 GATCO43716 136 aaKnown RBP3.08□□□□□ -1.92
ITGA4-209ENST00000478440 CEBPGP53567 150 aa3.08□□□□□ -1.92
ITGA4-209ENST00000478440 MEF2BQ02080 365 aaPredicted RBP3.08□□□□□ -1.92
ITGA4-209ENST00000478440 C9orf62Q8N4C0 152 aa3.08□□□□□ -1.92
ITGA4-209ENST00000478440 RNASE7Q9H1E1 156 aaKnown RBP3.08□□□□□ -1.92
ITGA4-209ENST00000478440 TRBV20OR9-2A0A075B6H5 130 aa3.07□□□□□ -1.92
ITGA4-209ENST00000478440 TGIF2-C20orf24A0A0A6YYL0 155 aa3.07□□□□□ -1.92
ITGA4-209ENST00000478440 A8MWL6 223 aa3.07□□□□□ -1.92
ITGA4-209ENST00000478440 SMLR1H3BR10 107 aa3.07□□□□□ -1.92
ITGA4-209ENST00000478440 ESDP10768 282 aa3.07□□□□□ -1.92
ITGA4-209ENST00000478440 FOXA3P55318 350 aaPredicted RBP3.07□□□□□ -1.92
ITGA4-209ENST00000478440 ZNF345Q14585 488 aa3.07□□□□□ -1.92
ITGA4-209ENST00000478440 MRPL52Q86TS9 123 aaKnown RBP3.07□□□□□ -1.92
ITGA4-209ENST00000478440 OR10D4PQ8NGN7 298 aa3.07□□□□□ -1.92
ITGA4-209ENST00000478440 PACRGQ96M98 296 aaPredicted RBP3.07□□□□□ -1.92
ITGA4-209ENST00000478440 CDC42SE2Q9NRR3 84 aa3.07□□□□□ -1.92
ITGA4-209ENST00000478440 IGKV2-28A0A075B6P5 120 aa3.06□□□□□ -1.92
ITGA4-209ENST00000478440 F8WDY8 70 aa3.06□□□□□ -1.92
ITGA4-209ENST00000478440 G3V3Q6 166 aa3.06□□□□□ -1.92
ITGA4-209ENST00000478440 PPP1R17O96001 155 aa3.06□□□□□ -1.92
ITGA4-209ENST00000478440 IGKV2D-28P01615 120 aa3.06□□□□□ -1.92
ITGA4-209ENST00000478440 TMEM241Q24JQ0 296 aa3.06□□□□□ -1.92
ITGA4-209ENST00000478440 Q6ZUT4 128 aa3.06□□□□□ -1.92
ITGA4-209ENST00000478440 FAM210AQ96ND0 272 aa3.06□□□□□ -1.92
ITGA4-209ENST00000478440 CNFNQ9BYD5 112 aa3.06□□□□□ -1.92
ITGA4-209ENST00000478440 DNAH8Q96JB1 4490 aa3.05□□□□□ -1.92
ITGA4-209ENST00000478440 TRBV6-5A0A0K0K1A5 114 aa3.05□□□□□ -1.92
ITGA4-209ENST00000478440 A0A1B0GUT8 65 aa3.05□□□□□ -1.92
ITGA4-209ENST00000478440 SMKR1H3BMG3 65 aa3.05□□□□□ -1.92
ITGA4-209ENST00000478440 CRYGAP11844 174 aa3.05□□□□□ -1.92
ITGA4-209ENST00000478440 TAGLN2P37802 199 aaKnown RBP3.05□□□□□ -1.92
ITGA4-209ENST00000478440 HERVK_113P61574 105 aa3.05□□□□□ -1.92
ITGA4-209ENST00000478440 HBBP68871 147 aa3.05□□□□□ -1.92
ITGA4-209ENST00000478440 UNQ6190/PRO20217Q6UXQ8 127 aa3.05□□□□□ -1.92
ITGA4-209ENST00000478440 MRPL35Q9NZE8 188 aaKnown RBP3.05□□□□□ -1.92
ITGA4-209ENST00000478440 CARHSP1Q9Y2V2 147 aaKnown RBP3.05□□□□□ -1.92
ITGA4-209ENST00000478440 A0A0J9YXY3 114 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 TRBV27A0A0K0K1C4 114 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 HIGD1CA8MV81 97 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 PPP1R2P9O14990 202 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 TCAPO15273 167 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 RPL28P46779 137 aaKnown RBP3.04□□□□□ -1.92
ITGA4-209ENST00000478440 CKS1BP61024 79 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 RGS21Q2M5E4 152 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 AMN1Q8IY45 258 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 RETNLBQ9BQ08 111 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 SMDT1Q9H4I9 107 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 TOMM7Q9P0U1 55 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 UBE2D4Q9Y2X8 147 aa3.04□□□□□ -1.92
ITGA4-209ENST00000478440 CSDC2Q9Y534 153 aaKnown RBP3.04□□□□□ -1.92
ITGA4-209ENST00000478440 A0A0U1RRA0 63 aa3.03□□□□□ -1.92
ITGA4-209ENST00000478440 K7EN84 100 aa3.03□□□□□ -1.92
ITGA4-209ENST00000478440 NUPR1O60356 82 aa3.03□□□□□ -1.92
ITGA4-209ENST00000478440 RAB5AP20339 215 aa3.03□□□□□ -1.92
ITGA4-209ENST00000478440 CKS2P33552 79 aa3.03□□□□□ -1.92
ITGA4-209ENST00000478440 UBE2AP49459 152 aa3.03□□□□□ -1.92
ITGA4-209ENST00000478440 LINC00469Q8N7U9 141 aa3.03□□□□□ -1.92
ITGA4-209ENST00000478440 C2orf88Q9BSF0 95 aa3.03□□□□□ -1.92
ITGA4-209ENST00000478440 TMEM191AQ9H0A3 160 aa3.03□□□□□ -1.92
ITGA4-209ENST00000478440 C6orf48Q9UBA6 75 aa3.03□□□□□ -1.92
ITGA4-209ENST00000478440 TNXBP22105 4242 aa3.03□□□□□ -1.92
ITGA4-209ENST00000478440 IGKV2D-26A0A0A0MRZ7 120 aa3.02□□□□□ -1.93
ITGA4-209ENST00000478440 TRBV30A0A0K0K1B3 111 aa3.02□□□□□ -1.93
ITGA4-209ENST00000478440 HMSDA8MTL9 139 aa3.02□□□□□ -1.93
ITGA4-209ENST00000478440 NDUFC2-KCTD14E9PQ53 114 aa3.02□□□□□ -1.93
ITGA4-209ENST00000478440 TLX1NBP0CAT3 122 aa3.02□□□□□ -1.93
ITGA4-209ENST00000478440 RAB4AP20338 218 aa3.02□□□□□ -1.93
ITGA4-209ENST00000478440 IFI27P40305 119 aaPredicted RBP3.02□□□□□ -1.93
ITGA4-209ENST00000478440 POLR2KP53803 58 aaKnown RBP3.02□□□□□ -1.93
ITGA4-209ENST00000478440 RPL39P62891 51 aaKnown RBP3.02□□□□□ -1.93
ITGA4-209ENST00000478440 C2orf82Q6UX34 121 aa3.02□□□□□ -1.93
ITGA4-209ENST00000478440 LINC00173Q6ZV60 143 aa3.02□□□□□ -1.93
ITGA4-209ENST00000478440 LINC00304Q8N9R0 145 aa3.02□□□□□ -1.93
ITGA4-209ENST00000478440 SMIM7Q9BQ49 75 aa3.02□□□□□ -1.93
ITGA4-209ENST00000478440 TIMM21Q9BVV7 248 aa3.02□□□□□ -1.93
ITGA4-209ENST00000478440 SPANXA1Q9NS26 97 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms