RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 UNQ6190/PRO20217Q6UXQ8 127 aa10.14□□□□□ -0.79
NPHP4-208ENST00000478423 CSDC2Q9Y534 153 aaKnown RBP10.14□□□□□ -0.79
NPHP4-208ENST00000478423 FAM19A1Q7Z5A9 133 aa10.13□□□□□ -0.79
NPHP4-208ENST00000478423 LST1O00453 97 aa10.13□□□□□ -0.79
NPHP4-208ENST00000478423 Q6ZQY7 126 aa10.13□□□□□ -0.79
NPHP4-208ENST00000478423 SMIM11BQ8TCY0 68 aa10.13□□□□□ -0.79
NPHP4-208ENST00000478423 DSPP15924 2871 aaKnown RBP10.12□□□□□ -0.79
NPHP4-208ENST00000478423 TRAV23DV6A0A075B6W5 121 aa10.12□□□□□ -0.79
NPHP4-208ENST00000478423 B9D2Q9BPU9 175 aa10.11□□□□□ -0.79
NPHP4-208ENST00000478423 C11orf72Q8NBR9 251 aa10.11□□□□□ -0.79
NPHP4-208ENST00000478423 M0R2N4 97 aa10.11□□□□□ -0.79
NPHP4-208ENST00000478423 MT-ATP8P03928 68 aa10.11□□□□□ -0.79
NPHP4-208ENST00000478423 AKAP13Q12802 2813 aa10.11□□□□□ -0.79
NPHP4-208ENST00000478423 LINC00315P59091 139 aa10.1□□□□□ -0.79
NPHP4-208ENST00000478423 C9orf116Q5BN46 136 aaPredicted RBP10.1□□□□□ -0.79
NPHP4-208ENST00000478423 COX17Q14061 63 aa10.09□□□□□ -0.79
NPHP4-208ENST00000478423 FAM19A4Q96LR4 140 aa10.09□□□□□ -0.79
NPHP4-208ENST00000478423 ADAMTSL4-AS1Q5T5F5 129 aa10.09□□□□□ -0.79
NPHP4-208ENST00000478423 M0R378 163 aa10.08□□□□□ -0.8
NPHP4-208ENST00000478423 FHL3Q13643 280 aa10.08□□□□□ -0.8
NPHP4-208ENST00000478423 BPY2O14599 106 aa10.08□□□□□ -0.8
NPHP4-208ENST00000478423 NBEAQ8NFP9 2946 aa10.08□□□□□ -0.8
NPHP4-208ENST00000478423 TEP1Q99973 2627 aaKnown RBP10.07□□□□□ -0.8
NPHP4-208ENST00000478423 SDIM1Q6ZPB5 146 aa10.06□□□□□ -0.8
NPHP4-208ENST00000478423 C4orf48Q5BLP8 95 aa10.05□□□□□ -0.8
NPHP4-208ENST00000478423 A0A1B0GUV1 79 aa10.05□□□□□ -0.8
NPHP4-208ENST00000478423 FSHBP01225 129 aa10.05□□□□□ -0.8
NPHP4-208ENST00000478423 CCKP06307 115 aa10.05□□□□□ -0.8
NPHP4-208ENST00000478423 RPL37AP8A6NKH3 93 aa10.04□□□□□ -0.8
NPHP4-208ENST00000478423 ZNF73O43830 326 aaPredicted RBP10.04□□□□□ -0.8
NPHP4-208ENST00000478423 MUC7Q8TAX7 377 aa10.04□□□□□ -0.8
NPHP4-208ENST00000478423 H0Y9J4 135 aa10.04□□□□□ -0.8
NPHP4-208ENST00000478423 PRR3P79522 188 aaKnown RBP10.04□□□□□ -0.8
NPHP4-208ENST00000478423 SCXQ7RTU7 201 aa10.04□□□□□ -0.8
NPHP4-208ENST00000478423 Q9UF83 564 aa10.04□□□□□ -0.8
NPHP4-208ENST00000478423 EGFEM1PQ0D2K5 195 aa10.03□□□□□ -0.8
NPHP4-208ENST00000478423 MP68P56378 58 aa10.03□□□□□ -0.8
NPHP4-208ENST00000478423 SS18L2Q9UHA2 77 aa10.03□□□□□ -0.8
NPHP4-208ENST00000478423 UPK3BQ9BT76 320 aa10.03□□□□□ -0.8
NPHP4-208ENST00000478423 WFDC10BQ8IUB3 73 aa10.03□□□□□ -0.8
NPHP4-208ENST00000478423 KLK9Q2XQG4 91 aa10.02□□□□□ -0.8
NPHP4-208ENST00000478423 LRCOL1A6NCL2 159 aa10.02□□□□□ -0.81
NPHP4-208ENST00000478423 LOC107984640A0A0U1RRK4 108 aa10.01□□□□□ -0.81
NPHP4-208ENST00000478423 LYPD5Q6UWN5 251 aa10.01□□□□□ -0.81
NPHP4-208ENST00000478423 NTM-AS1Q6ZSK4 140 aa10.01□□□□□ -0.81
NPHP4-208ENST00000478423 PPDPFQ9H3Y8 114 aa10□□□□□ -0.81
NPHP4-208ENST00000478423 LY6G6CO95867 125 aa10□□□□□ -0.81
NPHP4-208ENST00000478423 CELA1Q9UNI1 258 aa9.99□□□□□ -0.81
NPHP4-208ENST00000478423 C3orf84H3BNL1 204 aa9.99□□□□□ -0.81
NPHP4-208ENST00000478423 NDUFV3P56181 108 aaKnown RBP9.99□□□□□ -0.81
NPHP4-208ENST00000478423 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
NPHP4-208ENST00000478423 TRBV10-3A0A0K0K1G6 114 aa9.99□□□□□ -0.81
NPHP4-208ENST00000478423 C6orf223Q8N319 242 aa9.99□□□□□ -0.81
NPHP4-208ENST00000478423 RPL28P46779 137 aaKnown RBP9.98□□□□□ -0.81
NPHP4-208ENST00000478423 SMIM20Q8N5G0 67 aa9.98□□□□□ -0.81
NPHP4-208ENST00000478423 DHRS4-AS1Q9P1J3 65 aa9.98□□□□□ -0.81
NPHP4-208ENST00000478423 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
NPHP4-208ENST00000478423 USP17L23D6RBM5 183 aa9.97□□□□□ -0.81
NPHP4-208ENST00000478423 FRYLO94915 3013 aa9.97□□□□□ -0.81
NPHP4-208ENST00000478423 CHD6Q8TD26 2715 aa9.96□□□□□ -0.81
NPHP4-208ENST00000478423 IGHV3OR16-9A0A0B4J2B5 98 aa9.96□□□□□ -0.81
NPHP4-208ENST00000478423 SETXQ7Z333 2677 aaKnown RBP9.96□□□□□ -0.82
NPHP4-208ENST00000478423 ATP5EP2Q5VTU8 51 aa9.95□□□□□ -0.82
NPHP4-208ENST00000478423 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.95□□□□□ -0.82
NPHP4-208ENST00000478423 C20orf197Q8N268 126 aa9.95□□□□□ -0.82
NPHP4-208ENST00000478423 XGP55808 180 aa9.94□□□□□ -0.82
NPHP4-208ENST00000478423 NUPR2A6NF83 97 aa9.94□□□□□ -0.82
NPHP4-208ENST00000478423 NDUFC2-KCTD14E9PQ53 114 aa9.93□□□□□ -0.82
NPHP4-208ENST00000478423 X6R8D5 127 aa9.93□□□□□ -0.82
NPHP4-208ENST00000478423 IGLV5-39A0A0G2JS06 123 aa9.93□□□□□ -0.82
NPHP4-208ENST00000478423 KRTAP24-1Q3LI83 254 aa9.93□□□□□ -0.82
NPHP4-208ENST00000478423 TMEM258P61165 79 aa9.93□□□□□ -0.82
NPHP4-208ENST00000478423 A0A096LNT2 108 aa9.92□□□□□ -0.82
NPHP4-208ENST00000478423 C7orf33Q8WU49 177 aa9.92□□□□□ -0.82
NPHP4-208ENST00000478423 FRYQ5TBA9 3013 aa9.92□□□□□ -0.82
NPHP4-208ENST00000478423 STAB1Q9NY15 2570 aa9.92□□□□□ -0.82
NPHP4-208ENST00000478423 EYSQ5T1H1 3165 aa9.92□□□□□ -0.82
NPHP4-208ENST00000478423 Q8N814 137 aa9.92□□□□□ -0.82
NPHP4-208ENST00000478423 COL6A3P12111 3177 aa9.91□□□□□ -0.82
NPHP4-208ENST00000478423 WFDC9Q8NEX5 89 aa9.91□□□□□ -0.82
NPHP4-208ENST00000478423 MYO15AQ9UKN7 3530 aa9.91□□□□□ -0.82
NPHP4-208ENST00000478423 A0A087WYN8 130 aa9.91□□□□□ -0.82
NPHP4-208ENST00000478423 M0QXV9 152 aa9.91□□□□□ -0.82
NPHP4-208ENST00000478423 TEX15Q9BXT5 2789 aa9.91□□□□□ -0.82
NPHP4-208ENST00000478423 LINC00337Q8N6G1 96 aa9.9□□□□□ -0.82
NPHP4-208ENST00000478423 UQCRQO14949 82 aa9.89□□□□□ -0.83
NPHP4-208ENST00000478423 NDUFC2O95298 119 aa9.89□□□□□ -0.83
NPHP4-208ENST00000478423 Q6ZRU5 148 aa9.89□□□□□ -0.83
NPHP4-208ENST00000478423 LINC00474Q9P2X8 69 aa9.89□□□□□ -0.83
NPHP4-208ENST00000478423 PLAC8L1A1L4L8 177 aa9.88□□□□□ -0.83
NPHP4-208ENST00000478423 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
NPHP4-208ENST00000478423 C2orf48Q96LS8 159 aa9.88□□□□□ -0.83
NPHP4-208ENST00000478423 IMUPQ9GZP8 106 aa9.88□□□□□ -0.83
NPHP4-208ENST00000478423 A8MTW9 85 aa9.87□□□□□ -0.83
NPHP4-208ENST00000478423 ESRGQ1W209 222 aa9.87□□□□□ -0.83
NPHP4-208ENST00000478423 FAM240AA0A1B0GVK7 77 aa9.85□□□□□ -0.83
NPHP4-208ENST00000478423 IGKV4-1P06312 121 aa9.85□□□□□ -0.83
NPHP4-208ENST00000478423 SPINK6Q6UWN8 80 aa9.85□□□□□ -0.83
NPHP4-208ENST00000478423 IGLV5-45A0A087WSX0 123 aa9.84□□□□□ -0.83
NPHP4-208ENST00000478423 COL6A5A8TX70 2615 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms