RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 FCER1GP30273 86 aa4.07□□□□□ -1.76
PTPRN-214ENST00000477819 RPL32P62910 135 aaKnown RBP4.07□□□□□ -1.76
PTPRN-214ENST00000477819 Q5BKY6 102 aa4.07□□□□□ -1.76
PTPRN-214ENST00000477819 COX6B2Q6YFQ2 88 aa4.07□□□□□ -1.76
PTPRN-214ENST00000477819 NEBP20929 6669 aa4.07□□□□□ -1.76
PTPRN-214ENST00000477819 BORCS7-ASMTA0A0B4J1R7 106 aa4.06□□□□□ -1.76
PTPRN-214ENST00000477819 HSBP1L1C9JCN9 74 aa4.06□□□□□ -1.76
PTPRN-214ENST00000477819 SMKR1H3BMG3 65 aa4.06□□□□□ -1.76
PTPRN-214ENST00000477819 SCO1O75880 301 aa4.06□□□□□ -1.76
PTPRN-214ENST00000477819 RPL39P62891 51 aaKnown RBP4.06□□□□□ -1.76
PTPRN-214ENST00000477819 PNRC1Q12796 327 aaPredicted RBP4.06□□□□□ -1.76
PTPRN-214ENST00000477819 SMIM15Q7Z3B0 74 aa4.06□□□□□ -1.76
PTPRN-214ENST00000477819 ERASQ7Z444 233 aa4.06□□□□□ -1.76
PTPRN-214ENST00000477819 SFT2D1Q8WV19 159 aa4.06□□□□□ -1.76
PTPRN-214ENST00000477819 PLEKHB2Q96CS7 222 aa4.06□□□□□ -1.76
PTPRN-214ENST00000477819 KIR2DL4Q99706 377 aa4.06□□□□□ -1.76
PTPRN-214ENST00000477819 VCYO14598 125 aa4.05□□□□□ -1.76
PTPRN-214ENST00000477819 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
PTPRN-214ENST00000477819 KCNRGQ8N5I3 272 aa4.05□□□□□ -1.76
PTPRN-214ENST00000477819 TIMM21Q9BVV7 248 aa4.05□□□□□ -1.76
PTPRN-214ENST00000477819 TRBV20OR9-2A0A075B6H5 130 aa4.04□□□□□ -1.76
PTPRN-214ENST00000477819 IGKV2-28A0A075B6P5 120 aa4.04□□□□□ -1.76
PTPRN-214ENST00000477819 TGIF2-C20orf24A0A0A6YYL0 155 aa4.04□□□□□ -1.76
PTPRN-214ENST00000477819 IFITM10A6NMD0 228 aa4.04□□□□□ -1.76
PTPRN-214ENST00000477819 IGKV2D-28P01615 120 aa4.04□□□□□ -1.76
PTPRN-214ENST00000477819 GNG4P50150 75 aa4.04□□□□□ -1.76
PTPRN-214ENST00000477819 SNRPEP62304 92 aaKnown RBP4.04□□□□□ -1.76
PTPRN-214ENST00000477819 SMAGPQ0VAQ4 97 aa4.04□□□□□ -1.76
PTPRN-214ENST00000477819 NDUFA12Q9UI09 145 aa4.04□□□□□ -1.76
PTPRN-214ENST00000477819 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
PTPRN-214ENST00000477819 A0A0U1RRA0 63 aa4.03□□□□□ -1.76
PTPRN-214ENST00000477819 TMEM238C9JI98 176 aa4.03□□□□□ -1.76
PTPRN-214ENST00000477819 SPINK1P00995 79 aa4.03□□□□□ -1.76
PTPRN-214ENST00000477819 FAM19A1Q7Z5A9 133 aa4.03□□□□□ -1.76
PTPRN-214ENST00000477819 Q8N377 158 aa4.03□□□□□ -1.76
PTPRN-214ENST00000477819 FAM213BQ8TBF2 198 aa4.03□□□□□ -1.76
PTPRN-214ENST00000477819 MBD3L1Q8WWY6 194 aa4.03□□□□□ -1.76
PTPRN-214ENST00000477819 C11orf52Q96A22 123 aa4.03□□□□□ -1.76
PTPRN-214ENST00000477819 TOMM7Q9P0U1 55 aa4.03□□□□□ -1.76
PTPRN-214ENST00000477819 PCP4L1A6NKN8 68 aa4.02□□□□□ -1.77
PTPRN-214ENST00000477819 PRYO14603 147 aa4.02□□□□□ -1.77
PTPRN-214ENST00000477819 CFC1P0CG37 223 aa4.02□□□□□ -1.77
PTPRN-214ENST00000477819 RAB4AP20338 218 aa4.02□□□□□ -1.77
PTPRN-214ENST00000477819 CKS1BP61024 79 aa4.02□□□□□ -1.77
PTPRN-214ENST00000477819 HBBP68871 147 aa4.02□□□□□ -1.77
PTPRN-214ENST00000477819 CCL20P78556 96 aa4.02□□□□□ -1.77
PTPRN-214ENST00000477819 IFITM3Q01628 133 aa4.02□□□□□ -1.77
PTPRN-214ENST00000477819 CBLN2Q8IUK8 224 aa4.02□□□□□ -1.77
PTPRN-214ENST00000477819 PRSS2P07478 247 aa4.01□□□□□ -1.77
PTPRN-214ENST00000477819 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
PTPRN-214ENST00000477819 C6orf226Q5I0X4 101 aa4.01□□□□□ -1.77
PTPRN-214ENST00000477819 AMN1Q8IY45 258 aa4.01□□□□□ -1.77
PTPRN-214ENST00000477819 SPRR4Q96PI1 79 aa4.01□□□□□ -1.77
PTPRN-214ENST00000477819 HIGD2AQ9BW72 106 aa4.01□□□□□ -1.77
PTPRN-214ENST00000477819 GNG13Q9P2W3 67 aa4.01□□□□□ -1.77
PTPRN-214ENST00000477819 FXYD6-FXYD2A0A087WZ82 144 aa4□□□□□ -1.77
PTPRN-214ENST00000477819 C9orf92A6NGG3 77 aa4□□□□□ -1.77
PTPRN-214ENST00000477819 K7EN84 100 aa4□□□□□ -1.77
PTPRN-214ENST00000477819 MRPS36P82909 103 aaKnown RBP4□□□□□ -1.77
PTPRN-214ENST00000477819 NKAPP1Q8N9T2 125 aa4□□□□□ -1.77
PTPRN-214ENST00000477819 TMEM18Q96B42 140 aa4□□□□□ -1.77
PTPRN-214ENST00000477819 TMEM126AQ9H061 195 aa4□□□□□ -1.77
PTPRN-214ENST00000477819 IGLV5-37A0A075B6J1 123 aa3.99□□□□□ -1.77
PTPRN-214ENST00000477819 SLC25A20O43772 301 aa3.99□□□□□ -1.77
PTPRN-214ENST00000477819 ZC2HC1BQ5TFG8 222 aa3.99□□□□□ -1.77
PTPRN-214ENST00000477819 FAM19A2Q8N3H0 131 aa3.99□□□□□ -1.77
PTPRN-214ENST00000477819 SMIM12Q96EX1 92 aa3.99□□□□□ -1.77
PTPRN-214ENST00000477819 TMEM191AQ9H0A3 160 aa3.99□□□□□ -1.77
PTPRN-214ENST00000477819 BIN3Q9NQY0 253 aa3.99□□□□□ -1.77
PTPRN-214ENST00000477819 SPANXA1Q9NS26 97 aa3.99□□□□□ -1.77
PTPRN-214ENST00000477819 M0R378 163 aa3.98□□□□□ -1.77
PTPRN-214ENST00000477819 ALKBH7Q9BT30 221 aaPredicted RBP3.98□□□□□ -1.77
PTPRN-214ENST00000477819 MED9Q9NWA0 146 aa3.98□□□□□ -1.77
PTPRN-214ENST00000477819 F8VRH5 84 aa3.97□□□□□ -1.77
PTPRN-214ENST00000477819 GIPP09681 153 aaPredicted RBP3.97□□□□□ -1.77
PTPRN-214ENST00000477819 RAB5BP61020 215 aa3.97□□□□□ -1.77
PTPRN-214ENST00000477819 UBE2V1Q13404 147 aa3.97□□□□□ -1.77
PTPRN-214ENST00000477819 Q6Q795 121 aa3.97□□□□□ -1.77
PTPRN-214ENST00000477819 Q6ZN92 141 aa3.97□□□□□ -1.77
PTPRN-214ENST00000477819 Q8IZM0 81 aa3.97□□□□□ -1.77
PTPRN-214ENST00000477819 GNB1LQ9BYB4 327 aa3.97□□□□□ -1.77
PTPRN-214ENST00000477819 IGLV4-3A0A075B6K6 122 aa3.96□□□□□ -1.78
PTPRN-214ENST00000477819 TCAPO15273 167 aa3.96□□□□□ -1.78
PTPRN-214ENST00000477819 GATCO43716 136 aaKnown RBP3.96□□□□□ -1.78
PTPRN-214ENST00000477819 LINC01561Q8N1V8 128 aa3.96□□□□□ -1.78
PTPRN-214ENST00000477819 MANBALQ9NQG1 85 aa3.96□□□□□ -1.78
PTPRN-214ENST00000477819 A0A1B0GUT8 65 aa3.95□□□□□ -1.78
PTPRN-214ENST00000477819 RPS29P62273 56 aaKnown RBP3.95□□□□□ -1.78
PTPRN-214ENST00000477819 MOBPQ13875 183 aa3.95□□□□□ -1.78
PTPRN-214ENST00000477819 IGLV9-49A0A0B4J1Y8 123 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 A8MWL6 223 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 UMAD1C9J7I0 102 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 PPP1R2P9O14990 202 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 ARPC5O15511 151 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 PPP1R17O96001 155 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 MT2AP02795 61 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 SEC61GP60059 68 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 HERV-K104P63124 156 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 MRPL51Q4U2R6 128 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms