RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 IGLV4-69A0A075B6H9 119 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 LINC01546A6NGU7 62 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 ATP5LO75964 103 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 LEPROTL1O95214 131 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 LY6G6CO95867 125 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 IGHV3-30P01768 117 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 IGHV3-33P01772 117 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 ANGP03950 147 aaKnown RBP2.31□□□□□ -2.04
UBR3-209ENST00000477461 IGHV3-30-3P0DP02 117 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 IGHV3-30-5P0DP03 117 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 FGF6P10767 208 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 ESDP10768 282 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 RPL39P62891 51 aaKnown RBP2.31□□□□□ -2.04
UBR3-209ENST00000477461 PMCHL1Q16048 86 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 TTC32Q5I0X7 151 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 LGALS9CQ6DKI2 356 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 Q6ZN92 141 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 WFDC10BQ8IUB3 73 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 FAM19A2Q8N3H0 131 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 C10orf126Q8N4M7 172 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 TOMM6Q96B49 74 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 UPK3BQ9BT76 320 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 CHCHD7Q9BUK0 85 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 TIMM21Q9BVV7 248 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 SPANXA1Q9NS26 97 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 HSPB8Q9UJY1 196 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 STAB2Q8WWQ8 2551 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 FBN3Q75N90 2809 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 ANK2Q01484 3957 aa2.31□□□□□ -2.04
UBR3-209ENST00000477461 IGKV2D-24A0A075B6R9 120 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 A0A096LNJ9 63 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 IGKV3OR2-268A0A0C4DH90 116 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 H0Y8G0 127 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.3□□□□□ -2.04
UBR3-209ENST00000477461 K7EP13 123 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 FABP4P15090 132 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 RBX1P62877 108 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 SS18Q15532 418 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 MPV17L2Q567V2 206 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 PDZD11Q5EBL8 140 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 LINC01556Q5JQF7 62 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 COA6Q5JTJ3 125 aaKnown RBP2.3□□□□□ -2.04
UBR3-209ENST00000477461 TEX43Q6ZNM6 134 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 MRPL52Q86TS9 123 aaKnown RBP2.3□□□□□ -2.04
UBR3-209ENST00000477461 ZNF664Q8N3J9 261 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 Q8N976 141 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 UBE2WQ96B02 151 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 RMI2Q96E14 147 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 TMEM141Q96I45 108 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 TIMM17AQ99595 171 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 C2orf88Q9BSF0 95 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 UBE2D4Q9Y2X8 147 aa2.3□□□□□ -2.04
UBR3-209ENST00000477461 CSDC2Q9Y534 153 aaKnown RBP2.3□□□□□ -2.04
UBR3-209ENST00000477461 IGLV4-60A0A075B6I1 120 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 TRAV8-3A0A0A6YYJ7 113 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 NBDYA0A0U1RRE5 68 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 C20orf202A1L168 122 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 PCP4L1A6NKN8 68 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 M0R2N4 97 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 CCL25O15444 150 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 NUPR1O60356 82 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 NMUP48645 174 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 MRPS36P82909 103 aaKnown RBP2.29□□□□□ -2.04
UBR3-209ENST00000477461 REG3AQ06141 175 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 KIAA0087Q14695 138 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 PMVKQ15126 192 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 MIAQ16674 131 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 RNASE13Q5GAN3 156 aaKnown RBP2.29□□□□□ -2.04
UBR3-209ENST00000477461 C6orf226Q5I0X4 101 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 CLPSL2Q6UWE3 100 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 Q6ZUT4 128 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 HIST3H2BBQ8N257 126 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 LINC00269Q8N2A0 174 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 IFI27L1Q96BM0 104 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 PACRGQ96M98 296 aaPredicted RBP2.29□□□□□ -2.04
UBR3-209ENST00000477461 MAP1LC3CQ9BXW4 147 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 CDC42SE2Q9NRR3 84 aa2.29□□□□□ -2.04
UBR3-209ENST00000477461 MEGF8Q7Z7M0 2845 aa2.28□□□□□ -2.04
UBR3-209ENST00000477461 IGLV10-54A0A075B6I4 117 aa2.28□□□□□ -2.04
UBR3-209ENST00000477461 TRAV13-1A0A0B4J241 112 aa2.28□□□□□ -2.04
UBR3-209ENST00000477461 TRAV8-4A0A0B4J246 113 aa2.28□□□□□ -2.04
UBR3-209ENST00000477461 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
UBR3-209ENST00000477461 IGIPA6NJ69 53 aa2.28□□□□□ -2.04
UBR3-209ENST00000477461 IBA57-AS1B1ANH7 110 aa2.28□□□□□ -2.04
UBR3-209ENST00000477461 PSCAO43653 123 aa2.28□□□□□ -2.04
UBR3-209ENST00000477461 KRTDAPP60985 99 aa2.28□□□□□ -2.04
UBR3-209ENST00000477461 SEC11AP67812 179 aa2.28□□□□□ -2.04
UBR3-209ENST00000477461 BAALCQ8WXS3 180 aa2.28□□□□□ -2.04
UBR3-209ENST00000477461 GEMIN7Q9H840 131 aaKnown RBP2.28□□□□□ -2.04
UBR3-209ENST00000477461 CHTOPQ9Y3Y2 248 aaKnown RBP2.28□□□□□ -2.04
UBR3-209ENST00000477461 TRAV12-1A0A0B4J245 112 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 LCE6AA0A183 80 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 LINC00959A0A1B0GUT2 108 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 F8VRH5 84 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 H3BRM9 83 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 SYS1-DBNDD2H3BUS1 97 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 APOMO95445 188 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 C3orf79P0CE67 100 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 XCL1P47992 114 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 UBE2D1P51668 147 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 193.2 ms