RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SMKR1H3BMG3 65 aa4.44□□□□□ -1.7
BRCA1-214ENST00000477152 MRPL51Q4U2R6 128 aaKnown RBP4.44□□□□□ -1.7
BRCA1-214ENST00000477152 Q6ZUT4 128 aa4.44□□□□□ -1.7
BRCA1-214ENST00000477152 PHF5AQ7RTV0 110 aaKnown RBP4.44□□□□□ -1.7
BRCA1-214ENST00000477152 OPRPNQ99935 248 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-214ENST00000477152 C2orf88Q9BSF0 95 aa4.44□□□□□ -1.7
BRCA1-214ENST00000477152 NAT8Q9UHE5 227 aa4.44□□□□□ -1.7
BRCA1-214ENST00000477152 V9GYV3 84 aa4.44□□□□□ -1.7
BRCA1-214ENST00000477152 TRBV30A0A0K0K1B3 111 aa4.43□□□□□ -1.7
BRCA1-214ENST00000477152 H0Y9J4 135 aa4.43□□□□□ -1.7
BRCA1-214ENST00000477152 GAS8-AS1O95177 125 aa4.43□□□□□ -1.7
BRCA1-214ENST00000477152 SRP19P09132 144 aaKnown RBP4.43□□□□□ -1.7
BRCA1-214ENST00000477152 PEA15Q15121 130 aa4.43□□□□□ -1.7
BRCA1-214ENST00000477152 ADIRFQ15847 76 aa4.43□□□□□ -1.7
BRCA1-214ENST00000477152 RNASE13Q5GAN3 156 aaKnown RBP4.43□□□□□ -1.7
BRCA1-214ENST00000477152 SMIM2Q9BVW6 85 aa4.43□□□□□ -1.7
BRCA1-214ENST00000477152 SMDT1Q9H4I9 107 aa4.43□□□□□ -1.7
BRCA1-214ENST00000477152 SMIM27A0A1W2PRY6 76 aa4.42□□□□□ -1.7
BRCA1-214ENST00000477152 G0S2P27469 103 aa4.42□□□□□ -1.7
BRCA1-214ENST00000477152 Q6ZN92 141 aa4.42□□□□□ -1.7
BRCA1-214ENST00000477152 LINC01561Q8N1V8 128 aa4.42□□□□□ -1.7
BRCA1-214ENST00000477152 IGHV3OR16-9A0A0B4J2B5 98 aa4.42□□□□□ -1.7
BRCA1-214ENST00000477152 CARHSP1Q9Y2V2 147 aaKnown RBP4.42□□□□□ -1.7
BRCA1-214ENST00000477152 PYGO1Q9Y3Y4 419 aa4.42□□□□□ -1.7
BRCA1-214ENST00000477152 M0QXV9 152 aa4.41□□□□□ -1.7
BRCA1-214ENST00000477152 NUPR1O60356 82 aa4.41□□□□□ -1.7
BRCA1-214ENST00000477152 CKS1BP61024 79 aa4.41□□□□□ -1.7
BRCA1-214ENST00000477152 RPL23P62829 140 aaKnown RBP4.41□□□□□ -1.7
BRCA1-214ENST00000477152 SEC11AP67812 179 aa4.41□□□□□ -1.7
BRCA1-214ENST00000477152 TEX43Q6ZNM6 134 aa4.41□□□□□ -1.7
BRCA1-214ENST00000477152 FAM19A5Q7Z5A7 132 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-214ENST00000477152 ORMDL3Q8N138 153 aa4.41□□□□□ -1.7
BRCA1-214ENST00000477152 LAMTOR2Q9Y2Q5 125 aa4.41□□□□□ -1.7
BRCA1-214ENST00000477152 D6R8Y8 96 aa4.4□□□□□ -1.7
BRCA1-214ENST00000477152 NDUFC2-KCTD14E9PQ53 114 aa4.4□□□□□ -1.7
BRCA1-214ENST00000477152 ATP5L2Q7Z4Y8 100 aa4.4□□□□□ -1.7
BRCA1-214ENST00000477152 TMEM141Q96I45 108 aa4.4□□□□□ -1.7
BRCA1-214ENST00000477152 RPL39P62891 51 aaKnown RBP4.4□□□□□ -1.71
BRCA1-214ENST00000477152 UNQ6190/PRO20217Q6UXQ8 127 aa4.4□□□□□ -1.71
BRCA1-214ENST00000477152 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
BRCA1-214ENST00000477152 K7EMI3 77 aa4.39□□□□□ -1.71
BRCA1-214ENST00000477152 TMEM136Q6ZRR5 245 aa4.39□□□□□ -1.71
BRCA1-214ENST00000477152 PRELID3AQ96N28 172 aa4.39□□□□□ -1.71
BRCA1-214ENST00000477152 VCX2Q9H322 139 aa4.39□□□□□ -1.71
BRCA1-214ENST00000477152 MAP1LC3AQ9H492 121 aa4.39□□□□□ -1.71
BRCA1-214ENST00000477152 C6orf48Q9UBA6 75 aa4.39□□□□□ -1.71
BRCA1-214ENST00000477152 PRR4Q16378 134 aa4.38□□□□□ -1.71
BRCA1-214ENST00000477152 ORMDL2Q53FV1 153 aa4.38□□□□□ -1.71
BRCA1-214ENST00000477152 C6orf226Q5I0X4 101 aa4.38□□□□□ -1.71
BRCA1-214ENST00000477152 MRPL54Q6P161 138 aaKnown RBP4.38□□□□□ -1.71
BRCA1-214ENST00000477152 CYSLTR1Q9Y271 337 aa4.38□□□□□ -1.71
BRCA1-214ENST00000477152 SMIM1B2RUZ4 78 aa4.38□□□□□ -1.71
BRCA1-214ENST00000477152 NPYP01303 97 aa4.38□□□□□ -1.71
BRCA1-214ENST00000477152 CXCL5P42830 114 aa4.38□□□□□ -1.71
BRCA1-214ENST00000477152 ZNF861PO60384 105 aa4.37□□□□□ -1.71
BRCA1-214ENST00000477152 RPL28P46779 137 aaKnown RBP4.37□□□□□ -1.71
BRCA1-214ENST00000477152 LINC00242Q5T6M2 205 aa4.37□□□□□ -1.71
BRCA1-214ENST00000477152 IGLV4-3A0A075B6K6 122 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 FAM168BA1KXE4 195 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 LINC01549A6NIU2 74 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 HERVK_113P63121 156 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 KIAA1644Q3SXP7 199 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 Q8IZM0 81 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 ALKBH7Q9BT30 221 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-214ENST00000477152 GEMIN7Q9H840 131 aaKnown RBP4.36□□□□□ -1.71
BRCA1-214ENST00000477152 TOMM7Q9P0U1 55 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 A0A1B0GXF2 115 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 KIAA0087Q14695 138 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 Q8N8P6 123 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 TP73-AS1Q9UF72 201 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 TNXBP22105 4242 aa4.36□□□□□ -1.71
BRCA1-214ENST00000477152 MT-ND4LP03901 98 aa4.35□□□□□ -1.71
BRCA1-214ENST00000477152 C2orf66Q6UXQ4 117 aa4.35□□□□□ -1.71
BRCA1-214ENST00000477152 NXT2Q9NPJ8 142 aaKnown RBP4.35□□□□□ -1.71
BRCA1-214ENST00000477152 LRP2P98164 4655 aa4.35□□□□□ -1.71
BRCA1-214ENST00000477152 LOC389332A0A1B0GUA5 103 aa4.34□□□□□ -1.71
BRCA1-214ENST00000477152 F8VRH5 84 aa4.34□□□□□ -1.71
BRCA1-214ENST00000477152 CRYGAP11844 174 aa4.34□□□□□ -1.71
BRCA1-214ENST00000477152 C2orf82Q6UX34 121 aa4.34□□□□□ -1.71
BRCA1-214ENST00000477152 C22orf24Q9Y442 160 aa4.34□□□□□ -1.71
BRCA1-214ENST00000477152 FAM19A3Q7Z5A8 133 aa4.34□□□□□ -1.71
BRCA1-214ENST00000477152 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.71
BRCA1-214ENST00000477152 KRTAP1-4P0C5Y4 121 aa4.33□□□□□ -1.72
BRCA1-214ENST00000477152 C9orf129Q5T035 196 aaKnown RBP4.33□□□□□ -1.72
BRCA1-214ENST00000477152 TYMSOSQ8TAI1 123 aa4.33□□□□□ -1.72
BRCA1-214ENST00000477152 FAM104AQ969W3 186 aa4.33□□□□□ -1.72
BRCA1-214ENST00000477152 AMELXQ99217 191 aa4.33□□□□□ -1.72
BRCA1-214ENST00000477152 BCE1O60756 84 aa4.33□□□□□ -1.72
BRCA1-214ENST00000477152 CTAG1AP78358 180 aa4.33□□□□□ -1.72
BRCA1-214ENST00000477152 NKAPP1Q8N9T2 125 aa4.33□□□□□ -1.72
BRCA1-214ENST00000477152 TIMM17AQ99595 171 aa4.33□□□□□ -1.72
BRCA1-214ENST00000477152 RAB14P61106 215 aa4.32□□□□□ -1.72
BRCA1-214ENST00000477152 PDZD11Q5EBL8 140 aa4.32□□□□□ -1.72
BRCA1-214ENST00000477152 LINC00469Q8N7U9 141 aa4.32□□□□□ -1.72
BRCA1-214ENST00000477152 UBE2AP49459 152 aa4.31□□□□□ -1.72
BRCA1-214ENST00000477152 C9JQL5 133 aa4.31□□□□□ -1.72
BRCA1-214ENST00000477152 H3BRM9 83 aa4.31□□□□□ -1.72
BRCA1-214ENST00000477152 TSPAN13O95857 204 aa4.31□□□□□ -1.72
BRCA1-214ENST00000477152 KRTAP11-1Q8IUC1 163 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms