RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.56□□□□□ -2
NUP58-209ENST00000476553 TMEM263Q8WUH6 116 aaKnown RBP2.56□□□□□ -2
NUP58-209ENST00000476553 URB2Q14146 1524 aaKnown RBP2.56□□□□□ -2
NUP58-209ENST00000476553 ZFHX3Q15911 3703 aa2.56□□□□□ -2
NUP58-209ENST00000476553 A0A087WXM4 84 aa2.55□□□□□ -2
NUP58-209ENST00000476553 H0Y9P7 68 aa2.55□□□□□ -2
NUP58-209ENST00000476553 SFTA3P0C7M3 94 aa2.55□□□□□ -2
NUP58-209ENST00000476553 C1orf167Q5SNV9 1468 aa2.55□□□□□ -2
NUP58-209ENST00000476553 SPATA8Q6RVD6 105 aa2.55□□□□□ -2
NUP58-209ENST00000476553 PKD1L3Q7Z443 1732 aa2.55□□□□□ -2
NUP58-209ENST00000476553 CD163L1Q9NR16 1453 aa2.55□□□□□ -2
NUP58-209ENST00000476553 LRRC37A2A6NM11 1700 aa2.54□□□□□ -2
NUP58-209ENST00000476553 NHSL1Q5SYE7 1610 aa2.54□□□□□ -2
NUP58-209ENST00000476553 ABCA9Q8IUA7 1624 aa2.54□□□□□ -2
NUP58-209ENST00000476553 BAHCC1Q9P281 2608 aa2.54□□□□□ -2
NUP58-209ENST00000476553 A0A096LNT2 108 aa2.54□□□□□ -2
NUP58-209ENST00000476553 A0A1B0GUT8 65 aa2.54□□□□□ -2
NUP58-209ENST00000476553 LINC00575Q6W349 94 aa2.54□□□□□ -2
NUP58-209ENST00000476553 PLCH1Q4KWH8 1693 aa2.53□□□□□ -2
NUP58-209ENST00000476553 DNAJC13O75165 2243 aa2.53□□□□□ -2
NUP58-209ENST00000476553 CRCT1Q9UGL9 99 aa2.53□□□□□ -2
NUP58-209ENST00000476553 HILPDAQ9Y5L2 63 aa2.53□□□□□ -2
NUP58-209ENST00000476553 NCR3O14931 201 aa2.52□□□□□ -2.01
NUP58-209ENST00000476553 SPINK7P58062 85 aa2.52□□□□□ -2.01
NUP58-209ENST00000476553 SMIM11BQ8TCY0 68 aa2.52□□□□□ -2.01
NUP58-209ENST00000476553 PLAC4Q8WY50 150 aa2.52□□□□□ -2.01
NUP58-209ENST00000476553 CDC42BPGQ6DT37 1551 aa2.52□□□□□ -2.01
NUP58-209ENST00000476553 GNGT1P63211 74 aa2.51□□□□□ -2.01
NUP58-209ENST00000476553 C10orf113Q5VZT2 155 aa2.51□□□□□ -2.01
NUP58-209ENST00000476553 GVQW2A0A096LPI5 108 aaPredicted RBP2.5□□□□□ -2.01
NUP58-209ENST00000476553 SPINK13Q1W4C9 94 aa2.5□□□□□ -2.01
NUP58-209ENST00000476553 Q6ZRX8 168 aa2.5□□□□□ -2.01
NUP58-209ENST00000476553 PLXNC1O60486 1568 aa2.49□□□□□ -2.01
NUP58-209ENST00000476553 H3BVH4 76 aa2.49□□□□□ -2.01
NUP58-209ENST00000476553 SAMD9Q5K651 1589 aa2.49□□□□□ -2.01
NUP58-209ENST00000476553 XRN1Q8IZH2 1706 aaKnown RBP2.48□□□□□ -2.01
NUP58-209ENST00000476553 C3orf79P0CE67 100 aa2.48□□□□□ -2.01
NUP58-209ENST00000476553 PAPPA2Q9BXP8 1791 aa2.48□□□□□ -2.01
NUP58-209ENST00000476553 ABCA1O95477 2261 aa2.48□□□□□ -2.01
NUP58-209ENST00000476553 KMT2BQ9UMN6 2715 aaPredicted RBP2.48□□□□□ -2.01
NUP58-209ENST00000476553 LMTK2Q8IWU2 1503 aa2.47□□□□□ -2.01
NUP58-209ENST00000476553 PAPPAQ13219 1627 aa2.47□□□□□ -2.01
NUP58-209ENST00000476553 G3V318 75 aa2.47□□□□□ -2.01
NUP58-209ENST00000476553 S100A3P33764 101 aa2.47□□□□□ -2.01
NUP58-209ENST00000476553 SMIM5Q71RC9 77 aa2.47□□□□□ -2.01
NUP58-209ENST00000476553 SSC5DA1L4H1 1573 aa2.47□□□□□ -2.01
NUP58-209ENST00000476553 WIZO95785 1651 aa2.47□□□□□ -2.01
NUP58-209ENST00000476553 LRP6O75581 1613 aa2.46□□□□□ -2.02
NUP58-209ENST00000476553 CICQ96RK0 1608 aaPredicted RBP2.46□□□□□ -2.02
NUP58-209ENST00000476553 TIAM2Q8IVF5 1701 aa2.46□□□□□ -2.02
NUP58-209ENST00000476553 ZNF831Q5JPB2 1677 aa2.46□□□□□ -2.02
NUP58-209ENST00000476553 PREX1Q8TCU6 1659 aa2.46□□□□□ -2.02
NUP58-209ENST00000476553 RALGAPBQ86X10 1494 aa2.45□□□□□ -2.02
NUP58-209ENST00000476553 TRBV6-1A0A0K0K1D8 114 aa2.45□□□□□ -2.02
NUP58-209ENST00000476553 NDUFB1O75438 58 aa2.45□□□□□ -2.02
NUP58-209ENST00000476553 LY6G6CO95867 125 aa2.45□□□□□ -2.02
NUP58-209ENST00000476553 KRTAP12-1P59990 96 aa2.45□□□□□ -2.02
NUP58-209ENST00000476553 GNG13Q9P2W3 67 aa2.45□□□□□ -2.02
NUP58-209ENST00000476553 PARP4Q9UKK3 1724 aaKnown RBP2.45□□□□□ -2.02
NUP58-209ENST00000476553 HIVEP2P31629 2446 aa2.44□□□□□ -2.02
NUP58-209ENST00000476553 NHSQ6T4R5 1651 aa2.44□□□□□ -2.02
NUP58-209ENST00000476553 ASCC3Q8N3C0 2202 aaKnown RBP2.44□□□□□ -2.02
NUP58-209ENST00000476553 ABCA6Q8N139 1617 aa2.44□□□□□ -2.02
NUP58-209ENST00000476553 IFI6P09912 130 aa2.44□□□□□ -2.02
NUP58-209ENST00000476553 RPL37P61927 97 aaKnown RBP2.44□□□□□ -2.02
NUP58-209ENST00000476553 KRTAP4-1Q9BYQ7 146 aa2.44□□□□□ -2.02
NUP58-209ENST00000476553 F5P12259 2224 aa2.44□□□□□ -2.02
NUP58-209ENST00000476553 PIN1P1O15428 100 aa2.43□□□□□ -2.02
NUP58-209ENST00000476553 HMGA1P17096 107 aaKnown RBP2.43□□□□□ -2.02
NUP58-209ENST00000476553 ATXN8Q156A1 80 aa2.43□□□□□ -2.02
NUP58-209ENST00000476553 MYO7AQ13402 2215 aa2.43□□□□□ -2.02
NUP58-209ENST00000476553 KIF1AQ12756 1690 aa2.43□□□□□ -2.02
NUP58-209ENST00000476553 COL14A1Q05707 1796 aaKnown RBP2.43□□□□□ -2.02
NUP58-209ENST00000476553 USP32Q8NFA0 1604 aa2.42□□□□□ -2.02
NUP58-209ENST00000476553 CACNA1BQ00975 2339 aa2.42□□□□□ -2.02
NUP58-209ENST00000476553 UBR3Q6ZT12 1888 aa2.42□□□□□ -2.02
NUP58-209ENST00000476553 BCORQ6W2J9 1755 aa2.42□□□□□ -2.02
NUP58-209ENST00000476553 DIP2AQ14689 1571 aa2.42□□□□□ -2.02
NUP58-209ENST00000476553 FXYD6-FXYD2A0A087WZ82 144 aa2.42□□□□□ -2.02
NUP58-209ENST00000476553 TRAV21A0A0B4J279 112 aa2.42□□□□□ -2.02
NUP58-209ENST00000476553 PRB1P04280 392 aa2.42□□□□□ -2.02
NUP58-209ENST00000476553 HAMPP81172 84 aa2.42□□□□□ -2.02
NUP58-209ENST00000476553 KIAA0556O60303 1618 aa2.42□□□□□ -2.02
NUP58-209ENST00000476553 ANKRD50Q9ULJ7 1429 aa2.42□□□□□ -2.02
NUP58-209ENST00000476553 CFAP43Q8NDM7 1665 aa2.41□□□□□ -2.02
NUP58-209ENST00000476553 LRRC7Q96NW7 1537 aa2.41□□□□□ -2.02
NUP58-209ENST00000476553 CACNA1CQ13936 2221 aa2.41□□□□□ -2.02
NUP58-209ENST00000476553 EIF2AK4Q9P2K8 1649 aaKnown RBP2.4□□□□□ -2.03
NUP58-209ENST00000476553 A0A1B0GU69 56 aa2.4□□□□□ -2.03
NUP58-209ENST00000476553 DEFB112Q30KQ8 113 aa2.38□□□□□ -2.03
NUP58-209ENST00000476553 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
NUP58-209ENST00000476553 WFDC9Q8NEX5 89 aa2.38□□□□□ -2.03
NUP58-209ENST00000476553 RNF17Q9BXT8 1623 aaKnown RBP2.38□□□□□ -2.03
NUP58-209ENST00000476553 A0A0G2JMZ2 1700 aa2.37□□□□□ -2.03
NUP58-209ENST00000476553 NREPQ16612 68 aa2.37□□□□□ -2.03
NUP58-209ENST00000476553 ALS2Q96Q42 1657 aa2.37□□□□□ -2.03
NUP58-209ENST00000476553 GAFA1Q96PS6 74 aa2.36□□□□□ -2.03
NUP58-209ENST00000476553 PRXQ9BXM0 1461 aa2.36□□□□□ -2.03
NUP58-209ENST00000476553 POLR1AO95602 1720 aaPredicted RBP2.36□□□□□ -2.03
NUP58-209ENST00000476553 PLXNB2O15031 1838 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms